RNA–Protein interactions for RNA: ENST00000493456.5

NUP50-218, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-218ENST00000493456 LINC00528Q8N1L1 170 aa11.81□□□□□ -0.52
NUP50-218ENST00000493456 EXOC3-AS1Q8N2X6 119 aa11.81□□□□□ -0.52
NUP50-218ENST00000493456 C20orf85Q9H1P6 137 aa11.81□□□□□ -0.52
NUP50-218ENST00000493456 UQCC1Q9NVA1 299 aa11.81□□□□□ -0.52
NUP50-218ENST00000493456 NAP1L6A6NFF2 107 aa11.8□□□□□ -0.52
NUP50-218ENST00000493456 IBA57-AS1B1ANH7 110 aa11.8□□□□□ -0.52
NUP50-218ENST00000493456 Q6ZSA8 131 aa11.8□□□□□ -0.52
NUP50-218ENST00000493456 BLNKQ8WV28 456 aa11.8□□□□□ -0.52
NUP50-218ENST00000493456 SPXQ9BT56 116 aa11.8□□□□□ -0.52
NUP50-218ENST00000493456 H3BMQ9 156 aa11.79□□□□□ -0.52
NUP50-218ENST00000493456 PYYP10082 97 aa11.79□□□□□ -0.52
NUP50-218ENST00000493456 VWC2Q2TAL6 325 aa11.79□□□□□ -0.52
NUP50-218ENST00000493456 SLC25A31Q9H0C2 315 aa11.79□□□□□ -0.52
NUP50-218ENST00000493456 FLVCR2Q9UPI3 526 aa11.79□□□□□ -0.52
NUP50-218ENST00000493456 TRAV4A0A0B4J268 109 aa11.78□□□□□ -0.52
NUP50-218ENST00000493456 PPT1P50897 306 aa11.78□□□□□ -0.52
NUP50-218ENST00000493456 BCAP31P51572 246 aa11.78□□□□□ -0.52
NUP50-218ENST00000493456 CAV2P51636 162 aa11.78□□□□□ -0.52
NUP50-218ENST00000493456 ZNF138P52744 262 aa11.78□□□□□ -0.52
NUP50-218ENST00000493456 BAXQ07812 192 aa11.78□□□□□ -0.52
NUP50-218ENST00000493456 FAM122CQ6P4D5 195 aa11.78□□□□□ -0.52
NUP50-218ENST00000493456 CHAC2Q8WUX2 184 aa11.78□□□□□ -0.52
NUP50-218ENST00000493456 TRGV11A0A075B6L2 103 aa11.77□□□□□ -0.53
NUP50-218ENST00000493456 UBE2L5PA0A1B0GUS4 154 aa11.77□□□□□ -0.53
NUP50-218ENST00000493456 CST7O76096 145 aa11.77□□□□□ -0.53
NUP50-218ENST00000493456 ZNF266Q14584 549 aa11.77□□□□□ -0.53
NUP50-218ENST00000493456 MUC21Q5SSG8 566 aa11.77□□□□□ -0.53
NUP50-218ENST00000493456 MITD1Q8WV92 249 aa11.77□□□□□ -0.53
NUP50-218ENST00000493456 Q9HAA7 133 aa11.77□□□□□ -0.53
NUP50-218ENST00000493456 GPN1Q9HCN4 374 aaPredicted RBP11.77□□□□□ -0.53
NUP50-218ENST00000493456 TRAV8-6A0A0B4J262 113 aa11.76□□□□□ -0.53
NUP50-218ENST00000493456 S100A5P33763 92 aa11.76□□□□□ -0.53
NUP50-218ENST00000493456 NHLRC2Q8NBF2 726 aa11.76□□□□□ -0.53
NUP50-218ENST00000493456 OR4C5Q8NGB2 326 aa11.76□□□□□ -0.53
NUP50-218ENST00000493456 Q8TAT8 98 aa11.76□□□□□ -0.53
NUP50-218ENST00000493456 S100A11P31949 105 aa11.75□□□□□ -0.53
NUP50-218ENST00000493456 INPP1P49441 399 aa11.75□□□□□ -0.53
NUP50-218ENST00000493456 LAGE3Q14657 143 aa11.75□□□□□ -0.53
NUP50-218ENST00000493456 ZNF846Q147U1 533 aa11.75□□□□□ -0.53
NUP50-218ENST00000493456 TMEM183BQ1AE95 376 aa11.75□□□□□ -0.53
NUP50-218ENST00000493456 Q6AWC8 147 aa11.75□□□□□ -0.53
NUP50-218ENST00000493456 FAM159AQ6UWV7 190 aa11.75□□□□□ -0.53
NUP50-218ENST00000493456 TMEM183AQ8IXX5 376 aa11.75□□□□□ -0.53
NUP50-218ENST00000493456 LSM5Q9Y4Y9 91 aaKnown RBP11.75□□□□□ -0.53
NUP50-218ENST00000493456 LOC100131303A0A0U1RQF7 123 aa11.74□□□□□ -0.53
NUP50-218ENST00000493456 SULT1A1P50225 295 aa11.74□□□□□ -0.53
NUP50-218ENST00000493456 TM2D2Q9BX73 214 aa11.74□□□□□ -0.53
NUP50-218ENST00000493456 SLC25A2Q9BXI2 301 aa11.74□□□□□ -0.53
NUP50-218ENST00000493456 RBAKDNA6NC62 111 aa11.73□□□□□ -0.53
NUP50-218ENST00000493456 FAM24AA6NFZ4 105 aa11.73□□□□□ -0.53
NUP50-218ENST00000493456 OXTP01178 125 aa11.73□□□□□ -0.53
NUP50-218ENST00000493456 PFN1P07737 140 aaKnown RBP11.73□□□□□ -0.53
NUP50-218ENST00000493456 NBEAP1P0C6P0 100 aa11.73□□□□□ -0.53
NUP50-218ENST00000493456 PVALBP20472 110 aaPredicted RBP11.73□□□□□ -0.53
NUP50-218ENST00000493456 FGF7P21781 194 aa11.73□□□□□ -0.53
NUP50-218ENST00000493456 HBG1P69891 147 aa11.73□□□□□ -0.53
NUP50-218ENST00000493456 HBG2P69892 147 aa11.73□□□□□ -0.53
NUP50-218ENST00000493456 TDRG1Q3Y452 100 aa11.73□□□□□ -0.53
NUP50-218ENST00000493456 OR10J3Q5JRS4 329 aa11.73□□□□□ -0.53
NUP50-218ENST00000493456 C11orf1Q9H5F2 150 aa11.73□□□□□ -0.53
NUP50-218ENST00000493456 M0R2P5 195 aa11.72□□□□□ -0.53
NUP50-218ENST00000493456 GATA1P15976 413 aaPredicted RBP11.72□□□□□ -0.53
NUP50-218ENST00000493456 CSN1S1P47710 185 aa11.72□□□□□ -0.53
NUP50-218ENST00000493456 BAK1Q16611 211 aa11.72□□□□□ -0.53
NUP50-218ENST00000493456 SPANXN2Q5MJ10 180 aa11.72□□□□□ -0.53
NUP50-218ENST00000493456 TRIQKQ629K1 86 aa11.72□□□□□ -0.53
NUP50-218ENST00000493456 STX12Q86Y82 276 aa11.72□□□□□ -0.53
NUP50-218ENST00000493456 FAM167A-AS1Q96KT0 104 aa11.72□□□□□ -0.53
NUP50-218ENST00000493456 LYRM2Q9NU23 88 aaPredicted RBP11.72□□□□□ -0.53
NUP50-218ENST00000493456 PLA2G2DQ9UNK4 145 aa11.72□□□□□ -0.53
NUP50-218ENST00000493456 LENEPQ9Y5L5 61 aa11.72□□□□□ -0.53
NUP50-218ENST00000493456 CCSO14618 274 aa11.71□□□□□ -0.53
NUP50-218ENST00000493456 ATP6V1FQ16864 119 aa11.71□□□□□ -0.53
NUP50-218ENST00000493456 CNPY1Q3B7I2 92 aa11.71□□□□□ -0.53
NUP50-218ENST00000493456 GCSAMLQ5JQS6 135 aa11.71□□□□□ -0.53
NUP50-218ENST00000493456 NPCDR1Q9BY65 106 aa11.71□□□□□ -0.53
NUP50-218ENST00000493456 OR51M1Q9H341 326 aa11.71□□□□□ -0.53
NUP50-218ENST00000493456 PKHD1L1Q86WI1 4243 aa11.71□□□□□ -0.54
NUP50-218ENST00000493456 CENPXA8MT69 81 aa11.7□□□□□ -0.54
NUP50-218ENST00000493456 FAM25EA8MYX2 175 aa11.7□□□□□ -0.54
NUP50-218ENST00000493456 IGHV3-30P01768 117 aa11.7□□□□□ -0.54
NUP50-218ENST00000493456 IGHV3-33P01772 117 aa11.7□□□□□ -0.54
NUP50-218ENST00000493456 IGHV3-30-3P0DP02 117 aa11.7□□□□□ -0.54
NUP50-218ENST00000493456 IGHV3-30-5P0DP03 117 aa11.7□□□□□ -0.54
NUP50-218ENST00000493456 BTCP35070 178 aa11.7□□□□□ -0.54
NUP50-218ENST00000493456 LELP1Q5T871 98 aa11.7□□□□□ -0.54
NUP50-218ENST00000493456 ASAH1Q13510 395 aa11.69□□□□□ -0.54
NUP50-218ENST00000493456 WFDC2Q14508 124 aa11.69□□□□□ -0.54
NUP50-218ENST00000493456 MIR17HGQ75NE6 70 aa11.69□□□□□ -0.54
NUP50-218ENST00000493456 SCXQ7RTU7 201 aa11.69□□□□□ -0.54
NUP50-218ENST00000493456 TMEM252Q8N6L7 170 aa11.69□□□□□ -0.54
NUP50-218ENST00000493456 FXYD5Q96DB9 178 aa11.69□□□□□ -0.54
NUP50-218ENST00000493456 PHYHIPLQ96FC7 376 aa11.69□□□□□ -0.54
NUP50-218ENST00000493456 PAXXQ9BUH6 204 aa11.69□□□□□ -0.54
NUP50-218ENST00000493456 NAGKQ9UJ70 344 aa11.69□□□□□ -0.54
NUP50-218ENST00000493456 IGHV3-16A0A0C4DH30 117 aa11.68□□□□□ -0.54
NUP50-218ENST00000493456 IGSF23A1L1A6 192 aa11.68□□□□□ -0.54
NUP50-218ENST00000493456 C5orf51A6NDU8 294 aa11.68□□□□□ -0.54
NUP50-218ENST00000493456 FBLL1A6NHQ2 334 aaKnown RBP11.68□□□□□ -0.54
NUP50-218ENST00000493456 OR10J4P0C629 311 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms