RNA–Protein interactions for RNA: ENST00000493387.5

LSM2-214, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5

Gene LSM2, Length 767 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-214ENST00000493387 FAM74A3Q4VXF1 159 aa8.43□□□□□ -1.06
LSM2-214ENST00000493387 UQCC3Q6UW78 93 aa8.43□□□□□ -1.06
LSM2-214ENST00000493387 COX8CQ7Z4L0 72 aa8.43□□□□□ -1.06
LSM2-214ENST00000493387 TMEM183AQ8IXX5 376 aa8.43□□□□□ -1.06
LSM2-214ENST00000493387 CSNK1G2-AS1Q8NCQ2 148 aa8.43□□□□□ -1.06
LSM2-214ENST00000493387 RNF183Q96D59 192 aa8.43□□□□□ -1.06
LSM2-214ENST00000493387 TVP23CQ96ET8 276 aa8.43□□□□□ -1.06
LSM2-214ENST00000493387 NIPSNAP3BQ9BS92 247 aa8.43□□□□□ -1.06
LSM2-214ENST00000493387 ZMAT4Q9H898 229 aa8.43□□□□□ -1.06
LSM2-214ENST00000493387 BIN3Q9NQY0 253 aa8.43□□□□□ -1.06
LSM2-214ENST00000493387 TRAV12-2A0A075B6T6 113 aa8.42□□□□□ -1.06
LSM2-214ENST00000493387 TRAV21A0A0B4J279 112 aa8.42□□□□□ -1.06
LSM2-214ENST00000493387 C9JCJ5 164 aa8.42□□□□□ -1.06
LSM2-214ENST00000493387 H7BYZ3 331 aa8.42□□□□□ -1.06
LSM2-214ENST00000493387 J3KRW8 73 aa8.42□□□□□ -1.06
LSM2-214ENST00000493387 GNG4P50150 75 aa8.42□□□□□ -1.06
LSM2-214ENST00000493387 DEFB135Q30KP9 77 aa8.42□□□□□ -1.06
LSM2-214ENST00000493387 GFI1BQ5VTD9 330 aa8.42□□□□□ -1.06
LSM2-214ENST00000493387 Q6AWC8 147 aa8.42□□□□□ -1.06
LSM2-214ENST00000493387 ASCL2Q99929 193 aa8.42□□□□□ -1.06
LSM2-214ENST00000493387 TM2D3Q9BRN9 247 aa8.42□□□□□ -1.06
LSM2-214ENST00000493387 TMEM208Q9BTX3 173 aa8.42□□□□□ -1.06
LSM2-214ENST00000493387 PARLQ9H300 379 aa8.42□□□□□ -1.06
LSM2-214ENST00000493387 DNAH3Q8TD57 4116 aa8.42□□□□□ -1.06
LSM2-214ENST00000493387 TRAV12-3A0A0B4J271 114 aa8.41□□□□□ -1.06
LSM2-214ENST00000493387 SMIM9A6NGZ8 99 aa8.41□□□□□ -1.06
LSM2-214ENST00000493387 CEBPGP53567 150 aa8.41□□□□□ -1.06
LSM2-214ENST00000493387 ZNF674Q2M3X9 581 aa8.41□□□□□ -1.06
LSM2-214ENST00000493387 CENPWQ5EE01 88 aa8.41□□□□□ -1.06
LSM2-214ENST00000493387 ZNF705AQ6ZN79 300 aaPredicted RBP8.41□□□□□ -1.06
LSM2-214ENST00000493387 EIF4E3Q8N5X7 224 aaKnown RBP8.41□□□□□ -1.06
LSM2-214ENST00000493387 C8orf49Q96NF6 230 aa8.41□□□□□ -1.06
LSM2-214ENST00000493387 LINC01587Q99440 93 aa8.41□□□□□ -1.06
LSM2-214ENST00000493387 NEU1Q99519 415 aa8.41□□□□□ -1.06
LSM2-214ENST00000493387 PYGO2Q9BRQ0 406 aa8.41□□□□□ -1.06
LSM2-214ENST00000493387 DERL1Q9BUN8 251 aa8.41□□□□□ -1.06
LSM2-214ENST00000493387 LY96Q9Y6Y9 160 aa8.41□□□□□ -1.06
LSM2-214ENST00000493387 FABP5P3A8MUU1 101 aa8.4□□□□□ -1.06
LSM2-214ENST00000493387 ZNF727A8MUV8 499 aa8.4□□□□□ -1.06
LSM2-214ENST00000493387 ZNF324O75467 553 aaPredicted RBP8.4□□□□□ -1.06
LSM2-214ENST00000493387 GCGP01275 180 aa8.4□□□□□ -1.06
LSM2-214ENST00000493387 PFN1P07737 140 aaKnown RBP8.4□□□□□ -1.06
LSM2-214ENST00000493387 SRSF3P84103 164 aaKnown RBP8.4□□□□□ -1.06
LSM2-214ENST00000493387 BTN1A1Q13410 526 aa8.4□□□□□ -1.06
LSM2-214ENST00000493387 KIR3DS1Q14943 382 aa8.4□□□□□ -1.06
LSM2-214ENST00000493387 SOHLH1Q5JUK2 328 aa8.4□□□□□ -1.06
LSM2-214ENST00000493387 FAM162BQ5T6X4 162 aa8.4□□□□□ -1.06
LSM2-214ENST00000493387 COMMD7Q86VX2 200 aa8.4□□□□□ -1.06
LSM2-214ENST00000493387 C1orf158Q8N1D5 194 aa8.4□□□□□ -1.06
LSM2-214ENST00000493387 OR11H2Q8NH07 326 aa8.4□□□□□ -1.06
LSM2-214ENST00000493387 SMIM7Q9BQ49 75 aa8.4□□□□□ -1.06
LSM2-214ENST00000493387 OVOL2Q9BRP0 275 aa8.4□□□□□ -1.06
LSM2-214ENST00000493387 LINC00467Q9BRT7 94 aa8.4□□□□□ -1.06
LSM2-214ENST00000493387 MLST8Q9BVC4 326 aa8.4□□□□□ -1.06
LSM2-214ENST00000493387 IGHV3OR16-12A0A075B7B8 117 aa8.39□□□□□ -1.07
LSM2-214ENST00000493387 C9JQL5 133 aa8.39□□□□□ -1.07
LSM2-214ENST00000493387 PRR9Q5T870 116 aa8.39□□□□□ -1.07
LSM2-214ENST00000493387 MGST1P10620 155 aaKnown RBP8.38□□□□□ -1.07
LSM2-214ENST00000493387 MIFP14174 115 aa8.38□□□□□ -1.07
LSM2-214ENST00000493387 TMEM241Q24JQ0 296 aa8.38□□□□□ -1.07
LSM2-214ENST00000493387 RRN3P1Q2M238 152 aa8.38□□□□□ -1.07
LSM2-214ENST00000493387 FAM159AQ6UWV7 190 aa8.38□□□□□ -1.07
LSM2-214ENST00000493387 ZC2HC1AQ96GY0 325 aa8.38□□□□□ -1.07
LSM2-214ENST00000493387 KCNS1Q96KK3 526 aa8.38□□□□□ -1.07
LSM2-214ENST00000493387 TRBV20OR9-2A0A075B6H5 130 aa8.37□□□□□ -1.07
LSM2-214ENST00000493387 IGHV1OR15-1A0A075B7D0 117 aa8.37□□□□□ -1.07
LSM2-214ENST00000493387 TMEM189A5PLL7 270 aa8.37□□□□□ -1.07
LSM2-214ENST00000493387 RBMY1A1P0DJD3 496 aaKnown RBP8.37□□□□□ -1.07
LSM2-214ENST00000493387 RBMY1CP0DJD4 496 aa8.37□□□□□ -1.07
LSM2-214ENST00000493387 ZNF80P51504 273 aaPredicted RBP8.37□□□□□ -1.07
LSM2-214ENST00000493387 RBMY1FQ15415 496 aaKnown RBP8.37□□□□□ -1.07
LSM2-214ENST00000493387 ANXA2RQ3ZCQ2 193 aa8.37□□□□□ -1.07
LSM2-214ENST00000493387 ZNF493Q6ZR52 646 aa8.37□□□□□ -1.07
LSM2-214ENST00000493387 NHLRC2Q8NBF2 726 aa8.37□□□□□ -1.07
LSM2-214ENST00000493387 DAZAP1Q96EP5 407 aaKnown RBP8.37□□□□□ -1.07
LSM2-214ENST00000493387 NAT8Q9UHE5 227 aa8.37□□□□□ -1.07
LSM2-214ENST00000493387 TRGV11A0A075B6L2 103 aa8.36□□□□□ -1.07
LSM2-214ENST00000493387 SH2D1AO60880 128 aa8.36□□□□□ -1.07
LSM2-214ENST00000493387 IGLV2-8P01709 118 aa8.36□□□□□ -1.07
LSM2-214ENST00000493387 SFTA3P0C7M3 94 aa8.36□□□□□ -1.07
LSM2-214ENST00000493387 NDUFA5Q16718 116 aa8.36□□□□□ -1.07
LSM2-214ENST00000493387 TDRG1Q3Y452 100 aa8.36□□□□□ -1.07
LSM2-214ENST00000493387 OCC1Q8TAD7 63 aa8.36□□□□□ -1.07
LSM2-214ENST00000493387 SDF2L1Q9HCN8 221 aa8.36□□□□□ -1.07
LSM2-214ENST00000493387 RETNQ9HD89 108 aa8.36□□□□□ -1.07
LSM2-214ENST00000493387 X6R8D5 127 aa8.36□□□□□ -1.07
LSM2-214ENST00000493387 FBN3Q75N90 2809 aa8.36□□□□□ -1.07
LSM2-214ENST00000493387 TMEM218A2RU14 115 aa8.35□□□□□ -1.07
LSM2-214ENST00000493387 CBY3A6NI87 242 aa8.35□□□□□ -1.07
LSM2-214ENST00000493387 ZNF705GA8MUZ8 300 aaPredicted RBP8.35□□□□□ -1.07
LSM2-214ENST00000493387 ORM1P02763 201 aa8.35□□□□□ -1.07
LSM2-214ENST00000493387 HTN1P15515 57 aa8.35□□□□□ -1.07
LSM2-214ENST00000493387 CRIP1P50238 77 aa8.35□□□□□ -1.07
LSM2-214ENST00000493387 PRR27Q6MZM9 219 aa8.35□□□□□ -1.07
LSM2-214ENST00000493387 TMEM263Q8WUH6 116 aaKnown RBP8.35□□□□□ -1.07
LSM2-214ENST00000493387 C16orf74Q96GX8 76 aa8.35□□□□□ -1.07
LSM2-214ENST00000493387 NAGKQ9UJ70 344 aa8.35□□□□□ -1.07
LSM2-214ENST00000493387 PGPEP1LA6NFU8 196 aa8.34□□□□□ -1.07
LSM2-214ENST00000493387 RPS20P60866 119 aaKnown RBP8.34□□□□□ -1.07
LSM2-214ENST00000493387 LINC01559Q495D7 138 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms