RNA–Protein interactions for RNA: ENST00000492840.1

SND1-216, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 5

Gene SND1, Length 472 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-216ENST00000492840 HMCN2Q8NDA2 5059 aa2.95□□□□□ -1.94
SND1-216ENST00000492840 GRIFINA4D1Z8 144 aa2.95□□□□□ -1.94
SND1-216ENST00000492840 HMGB3O15347 200 aaKnown RBP2.95□□□□□ -1.94
SND1-216ENST00000492840 IDO1P14902 403 aa2.95□□□□□ -1.94
SND1-216ENST00000492840 ZNF22P17026 224 aaPredicted RBP2.95□□□□□ -1.94
SND1-216ENST00000492840 S100A7P31151 101 aa2.95□□□□□ -1.94
SND1-216ENST00000492840 LPAR6P43657 344 aa2.95□□□□□ -1.94
SND1-216ENST00000492840 LINC00315P59091 139 aa2.95□□□□□ -1.94
SND1-216ENST00000492840 TAS2R20P59543 309 aa2.95□□□□□ -1.94
SND1-216ENST00000492840 DEFA3P59666 94 aa2.95□□□□□ -1.94
SND1-216ENST00000492840 STX19Q8N4C7 294 aa2.95□□□□□ -1.94
SND1-216ENST00000492840 ZNF563Q8TA94 476 aa2.95□□□□□ -1.94
SND1-216ENST00000492840 SLC7A6Q92536 515 aa2.95□□□□□ -1.94
SND1-216ENST00000492840 TOMM6Q96B49 74 aa2.95□□□□□ -1.94
SND1-216ENST00000492840 CYSLTR1Q9Y271 337 aa2.95□□□□□ -1.94
SND1-216ENST00000492840 KMT2AQ03164 3969 aa2.95□□□□□ -1.94
SND1-216ENST00000492840 IGLV2-18A0A075B6J9 118 aa2.94□□□□□ -1.94
SND1-216ENST00000492840 TRAV9-1A0A075B6T8 112 aa2.94□□□□□ -1.94
SND1-216ENST00000492840 IGKV1D-43A0A0B4J1Z2 117 aa2.94□□□□□ -1.94
SND1-216ENST00000492840 SMIM17P0DL12 118 aa2.94□□□□□ -1.94
SND1-216ENST00000492840 IFI30P13284 250 aa2.94□□□□□ -1.94
SND1-216ENST00000492840 PPIBP23284 216 aaKnown RBP2.94□□□□□ -1.94
SND1-216ENST00000492840 CSN1S1P47710 185 aa2.94□□□□□ -1.94
SND1-216ENST00000492840 GNG5P63218 68 aa2.94□□□□□ -1.94
SND1-216ENST00000492840 CCL20P78556 96 aa2.94□□□□□ -1.94
SND1-216ENST00000492840 SPANXN3Q5MJ09 141 aa2.94□□□□□ -1.94
SND1-216ENST00000492840 AKR1C8PQ5T2L2 129 aa2.94□□□□□ -1.94
SND1-216ENST00000492840 SLC25A40Q8TBP6 338 aa2.94□□□□□ -1.94
SND1-216ENST00000492840 GPR146Q96CH1 333 aa2.94□□□□□ -1.94
SND1-216ENST00000492840 IGF2BP2-AS1Q96M15 143 aa2.94□□□□□ -1.94
SND1-216ENST00000492840 TTTY13Q9BZ97 58 aa2.94□□□□□ -1.94
SND1-216ENST00000492840 MIXL1Q9H2W2 232 aa2.94□□□□□ -1.94
SND1-216ENST00000492840 C19orf12Q9NSK7 152 aa2.94□□□□□ -1.94
SND1-216ENST00000492840 TP73-AS1Q9UF72 201 aa2.94□□□□□ -1.94
SND1-216ENST00000492840 SLC35A3Q9Y2D2 325 aa2.94□□□□□ -1.94
SND1-216ENST00000492840 RNF11Q9Y3C5 154 aa2.94□□□□□ -1.94
SND1-216ENST00000492840 DNAH6Q9C0G6 4158 aa2.93□□□□□ -1.94
SND1-216ENST00000492840 DNAH17Q9UFH2 4485 aa2.93□□□□□ -1.94
SND1-216ENST00000492840 FAT2Q9NYQ8 4349 aa2.93□□□□□ -1.94
SND1-216ENST00000492840 MIF4GDA9UHW6 222 aaKnown RBP2.93□□□□□ -1.94
SND1-216ENST00000492840 GPR31O00270 319 aa2.93□□□□□ -1.94
SND1-216ENST00000492840 PRM2P04554 102 aa2.93□□□□□ -1.94
SND1-216ENST00000492840 LGALS1P09382 135 aaKnown RBP2.93□□□□□ -1.94
SND1-216ENST00000492840 SPI1P17947 270 aa2.93□□□□□ -1.94
SND1-216ENST00000492840 PHBP35232 272 aa2.93□□□□□ -1.94
SND1-216ENST00000492840 INSL3P51460 131 aa2.93□□□□□ -1.94
SND1-216ENST00000492840 POLR2HP52434 150 aaKnown RBP2.93□□□□□ -1.94
SND1-216ENST00000492840 FXYD7P58549 80 aa2.93□□□□□ -1.94
SND1-216ENST00000492840 NCALDP61601 193 aa2.93□□□□□ -1.94
SND1-216ENST00000492840 RPS11P62280 158 aaKnown RBP eCLIP2.93□□□□□ -1.94
SND1-216ENST00000492840 KLRD1Q13241 179 aa2.93□□□□□ -1.94
SND1-216ENST00000492840 ZNF181Q2M3W8 571 aa2.93□□□□□ -1.94
SND1-216ENST00000492840 AMMECR1LQ6DCA0 310 aa2.93□□□□□ -1.94
SND1-216ENST00000492840 Q6Q795 121 aa2.93□□□□□ -1.94
SND1-216ENST00000492840 STAG3L4Q8TBR4 150 aa2.93□□□□□ -1.94
SND1-216ENST00000492840 SMCR5Q8TEV8 140 aa2.93□□□□□ -1.94
SND1-216ENST00000492840 C1orf54Q8WWF1 131 aa2.93□□□□□ -1.94
SND1-216ENST00000492840 PYDC1Q8WXC3 89 aa2.93□□□□□ -1.94
SND1-216ENST00000492840 SH3BGRL3Q9H299 93 aa2.93□□□□□ -1.94
SND1-216ENST00000492840 DUSP21Q9H596 190 aa2.93□□□□□ -1.94
SND1-216ENST00000492840 FUT9Q9Y231 359 aa2.93□□□□□ -1.94
SND1-216ENST00000492840 NDUFAF1Q9Y375 327 aa2.93□□□□□ -1.94
SND1-216ENST00000492840 G3V2T6 193 aa2.92□□□□□ -1.94
SND1-216ENST00000492840 LEPROTO15243 131 aa2.92□□□□□ -1.94
SND1-216ENST00000492840 IGKV1-5P01602 117 aa2.92□□□□□ -1.94
SND1-216ENST00000492840 BLVRBP30043 206 aaPredicted RBP2.92□□□□□ -1.94
SND1-216ENST00000492840 CD200P41217 278 aa2.92□□□□□ -1.94
SND1-216ENST00000492840 SRP9P49458 86 aaKnown RBP2.92□□□□□ -1.94
SND1-216ENST00000492840 RHOBP62745 196 aa2.92□□□□□ -1.94
SND1-216ENST00000492840 ZNF141Q15928 474 aa2.92□□□□□ -1.94
SND1-216ENST00000492840 C2orf91Q6ZV80 131 aa2.92□□□□□ -1.94
SND1-216ENST00000492840 C1orf64Q8NEQ6 169 aa2.92□□□□□ -1.94
SND1-216ENST00000492840 LINC00167Q96N53 147 aa2.92□□□□□ -1.94
SND1-216ENST00000492840 ZNF2Q9BSG1 426 aaPredicted RBP2.92□□□□□ -1.94
SND1-216ENST00000492840 OR2J1Q9GZK6 312 aa2.92□□□□□ -1.94
SND1-216ENST00000492840 LYRM2Q9NU23 88 aaPredicted RBP2.92□□□□□ -1.94
SND1-216ENST00000492840 TAS2R7Q9NYW3 318 aa2.92□□□□□ -1.94
SND1-216ENST00000492840 TVP23BQ9NYZ1 205 aa2.92□□□□□ -1.94
SND1-216ENST00000492840 IL36BQ9NZH7 164 aa2.92□□□□□ -1.94
SND1-216ENST00000492840 MYCBP2O75592 4640 aa2.92□□□□□ -1.94
SND1-216ENST00000492840 VPS13DQ5THJ4 4388 aa2.91□□□□□ -1.94
SND1-216ENST00000492840 TRAV4A0A0B4J268 109 aa2.91□□□□□ -1.94
SND1-216ENST00000492840 CPSF4O95639 269 aaKnown RBP2.91□□□□□ -1.94
SND1-216ENST00000492840 NPYP01303 97 aa2.91□□□□□ -1.94
SND1-216ENST00000492840 NBEAP1P0C6P0 100 aa2.91□□□□□ -1.94
SND1-216ENST00000492840 HIST1H2BOP23527 126 aa2.91□□□□□ -1.94
SND1-216ENST00000492840 HIST1H2BBP33778 126 aa2.91□□□□□ -1.94
SND1-216ENST00000492840 HIST1H2BDP58876 126 aa2.91□□□□□ -1.94
SND1-216ENST00000492840 HIST1H2BCP62807 126 aa2.91□□□□□ -1.94
SND1-216ENST00000492840 FLI1Q01543 452 aaPredicted RBP2.91□□□□□ -1.94
SND1-216ENST00000492840 PRB3Q04118 309 aaPredicted RBP2.91□□□□□ -1.94
SND1-216ENST00000492840 HIST2H2BEQ16778 126 aa2.91□□□□□ -1.94
SND1-216ENST00000492840 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.91□□□□□ -1.94
SND1-216ENST00000492840 AADACL3Q5VUY0 350 aa2.91□□□□□ -1.94
SND1-216ENST00000492840 RPL22L1Q6P5R6 122 aaKnown RBP2.91□□□□□ -1.94
SND1-216ENST00000492840 SH2D6Q7Z4S9 175 aa2.91□□□□□ -1.94
SND1-216ENST00000492840 OR10K1Q8NGX5 313 aa2.91□□□□□ -1.94
SND1-216ENST00000492840 H1FXQ92522 213 aaKnown RBP2.91□□□□□ -1.94
SND1-216ENST00000492840 HIST1H2BHQ93079 126 aa2.91□□□□□ -1.94
SND1-216ENST00000492840 HIST1H2BNQ99877 126 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms