RNA–Protein interactions for RNA: ENST00000492626.5

SNX13-209, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,956 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-209ENST00000492626 TMEM75Q8N9X5 138 aa1.85□□□□□ -2.11
SNX13-209ENST00000492626 GPR119Q8TDV5 335 aa1.85□□□□□ -2.11
SNX13-209ENST00000492626 NAA38Q9BRA0 125 aaKnown RBP1.85□□□□□ -2.11
SNX13-209ENST00000492626 GINS3Q9BRX5 216 aa1.85□□□□□ -2.11
SNX13-209ENST00000492626 CHST6Q9GZX3 395 aa1.85□□□□□ -2.11
SNX13-209ENST00000492626 CTNNBIP1Q9NSA3 81 aaPredicted RBP1.85□□□□□ -2.11
SNX13-209ENST00000492626 NDUFB11Q9NX14 153 aa1.85□□□□□ -2.11
SNX13-209ENST00000492626 H3BQ85 93 aa1.84□□□□□ -2.11
SNX13-209ENST00000492626 IFNA21P01568 189 aa1.84□□□□□ -2.11
SNX13-209ENST00000492626 OR4X2Q8NGF9 303 aa1.84□□□□□ -2.11
SNX13-209ENST00000492626 CMTM2Q8TAZ6 248 aa1.84□□□□□ -2.11
SNX13-209ENST00000492626 ERMAPQ96PL5 475 aaPredicted RBP1.84□□□□□ -2.11
SNX13-209ENST00000492626 C11orf68Q9H3H3 251 aaKnown RBP1.84□□□□□ -2.11
SNX13-209ENST00000492626 LINC00574Q9H8X3 128 aa1.84□□□□□ -2.11
SNX13-209ENST00000492626 PROK2Q9HC23 129 aa1.84□□□□□ -2.11
SNX13-209ENST00000492626 OR52A1Q9UKL2 312 aa1.84□□□□□ -2.11
SNX13-209ENST00000492626 ADGRG4Q8IZF6 3080 aa1.84□□□□□ -2.11
SNX13-209ENST00000492626 AZU1P20160 251 aa1.84□□□□□ -2.11
SNX13-209ENST00000492626 OR10J1P30954 320 aa1.84□□□□□ -2.11
SNX13-209ENST00000492626 RHOGP84095 191 aa1.84□□□□□ -2.11
SNX13-209ENST00000492626 RPL19P84098 196 aaKnown RBP1.84□□□□□ -2.11
SNX13-209ENST00000492626 PRDX4Q13162 271 aa1.84□□□□□ -2.11
SNX13-209ENST00000492626 SPANXN3Q5MJ09 141 aa1.84□□□□□ -2.11
SNX13-209ENST00000492626 SLC36A1Q7Z2H8 476 aa1.84□□□□□ -2.11
SNX13-209ENST00000492626 CALHM3Q86XJ0 350 aa1.84□□□□□ -2.11
SNX13-209ENST00000492626 KRTAP11-1Q8IUC1 163 aa1.84□□□□□ -2.11
SNX13-209ENST00000492626 DEFB106AQ8N104 65 aa1.84□□□□□ -2.11
SNX13-209ENST00000492626 OSR2Q8N2R0 312 aa1.84□□□□□ -2.11
SNX13-209ENST00000492626 OR52L1Q8NGH7 329 aa1.84□□□□□ -2.11
SNX13-209ENST00000492626 THEM6Q8WUY1 208 aa1.84□□□□□ -2.11
SNX13-209ENST00000492626 TSSK6Q9BXA6 273 aa1.84□□□□□ -2.11
SNX13-209ENST00000492626 SMCO4Q9NRQ5 59 aa1.84□□□□□ -2.11
SNX13-209ENST00000492626 DNAJC15Q9Y5T4 150 aa1.84□□□□□ -2.11
SNX13-209ENST00000492626 C20orf202A1L168 122 aa1.84□□□□□ -2.12
SNX13-209ENST00000492626 HMSDA8MTL9 139 aa1.84□□□□□ -2.12
SNX13-209ENST00000492626 C16orf90A8MZG2 172 aa1.84□□□□□ -2.12
SNX13-209ENST00000492626 PSCAO43653 123 aa1.84□□□□□ -2.12
SNX13-209ENST00000492626 CTLA4P16410 223 aa1.84□□□□□ -2.12
SNX13-209ENST00000492626 TMEM69Q5SWH9 247 aa1.84□□□□□ -2.12
SNX13-209ENST00000492626 SBSNQ6UWP8 590 aa1.84□□□□□ -2.12
SNX13-209ENST00000492626 AMTNQ6UX39 209 aa1.84□□□□□ -2.12
SNX13-209ENST00000492626 LINC00322Q6ZN03 302 aaPredicted RBP1.84□□□□□ -2.12
SNX13-209ENST00000492626 Q6ZRU5 148 aa1.84□□□□□ -2.12
SNX13-209ENST00000492626 C11orf40Q8WZ69 217 aa1.84□□□□□ -2.12
SNX13-209ENST00000492626 COMMD5Q9GZQ3 224 aa1.84□□□□□ -2.12
SNX13-209ENST00000492626 OR2D2Q9H210 308 aa1.84□□□□□ -2.12
SNX13-209ENST00000492626 ANGPT4Q9Y264 503 aa1.84□□□□□ -2.12
SNX13-209ENST00000492626 TPRKBQ9Y3C4 175 aa1.84□□□□□ -2.12
SNX13-209ENST00000492626 RBM7Q9Y580 266 aaKnown RBP1.84□□□□□ -2.12
SNX13-209ENST00000492626 VPS13DQ5THJ4 4388 aa1.83□□□□□ -2.12
SNX13-209ENST00000492626 CSMD1Q96PZ7 3565 aa1.83□□□□□ -2.12
SNX13-209ENST00000492626 FXYD6-FXYD2A0A087WZ82 144 aa1.83□□□□□ -2.12
SNX13-209ENST00000492626 TRAPPC13A5PLN9 417 aa1.83□□□□□ -2.12
SNX13-209ENST00000492626 CORTO00230 105 aa1.83□□□□□ -2.12
SNX13-209ENST00000492626 IGKV1D-33P01593 117 aa1.83□□□□□ -2.12
SNX13-209ENST00000492626 IGKV1-33P01594 117 aa1.83□□□□□ -2.12
SNX13-209ENST00000492626 ROPN1LQ96C74 230 aa1.83□□□□□ -2.12
SNX13-209ENST00000492626 OR52E6Q96RD3 313 aa1.83□□□□□ -2.12
SNX13-209ENST00000492626 RTBDNQ9BSG5 229 aaPredicted RBP1.83□□□□□ -2.12
SNX13-209ENST00000492626 HIGD2AQ9BW72 106 aa1.83□□□□□ -2.12
SNX13-209ENST00000492626 FXYD6Q9H0Q3 95 aa1.83□□□□□ -2.12
SNX13-209ENST00000492626 GNG8Q9UK08 70 aa1.83□□□□□ -2.12
SNX13-209ENST00000492626 HHLA2Q9UM44 414 aa1.83□□□□□ -2.12
SNX13-209ENST00000492626 NOTCH1P46531 2555 aa1.83□□□□□ -2.12
SNX13-209ENST00000492626 IGHV1-69-2A0A0G2JMI3 117 aa1.83□□□□□ -2.12
SNX13-209ENST00000492626 F6UZH7 168 aa1.83□□□□□ -2.12
SNX13-209ENST00000492626 IGHV1-69P01742 117 aa1.83□□□□□ -2.12
SNX13-209ENST00000492626 PPP3R1P63098 170 aa1.83□□□□□ -2.12
SNX13-209ENST00000492626 MORN2Q502X0 79 aa1.83□□□□□ -2.12
SNX13-209ENST00000492626 SCXQ7RTU7 201 aa1.83□□□□□ -2.12
SNX13-209ENST00000492626 MAL2Q969L2 176 aa1.83□□□□□ -2.12
SNX13-209ENST00000492626 ZNF492Q9P255 531 aa1.83□□□□□ -2.12
SNX13-209ENST00000492626 NACAE9PAV3 2078 aa1.83□□□□□ -2.12
SNX13-209ENST00000492626 HSPG2P98160 4391 aa1.83□□□□□ -2.12
SNX13-209ENST00000492626 DOCK11Q5JSL3 2073 aa1.83□□□□□ -2.12
SNX13-209ENST00000492626 IGHV3OR16-8A0A075B7F1 116 aa1.83□□□□□ -2.12
SNX13-209ENST00000492626 C5orf58C9J3I9 102 aa1.83□□□□□ -2.12
SNX13-209ENST00000492626 H0YGG7 62 aa1.83□□□□□ -2.12
SNX13-209ENST00000492626 H3BMM0 161 aa1.83□□□□□ -2.12
SNX13-209ENST00000492626 OR5G3P0C626 314 aa1.83□□□□□ -2.12
SNX13-209ENST00000492626 FGF7P21781 194 aa1.83□□□□□ -2.12
SNX13-209ENST00000492626 ZNF705AQ6ZN79 300 aaPredicted RBP1.83□□□□□ -2.12
SNX13-209ENST00000492626 ZNF550Q7Z398 422 aa1.83□□□□□ -2.12
SNX13-209ENST00000492626 UBE2WQ96B02 151 aa1.83□□□□□ -2.12
SNX13-209ENST00000492626 SLC25A44Q96H78 314 aaPredicted RBP1.83□□□□□ -2.12
SNX13-209ENST00000492626 GNB1LQ9BYB4 327 aa1.83□□□□□ -2.12
SNX13-209ENST00000492626 LINC00470Q9BZP3 86 aa1.83□□□□□ -2.12
SNX13-209ENST00000492626 OR51I1Q9H343 314 aa1.83□□□□□ -2.12
SNX13-209ENST00000492626 GPR84Q9NQS5 396 aa1.83□□□□□ -2.12
SNX13-209ENST00000492626 PXMP4Q9Y6I8 212 aa1.83□□□□□ -2.12
SNX13-209ENST00000492626 FAT4Q6V0I7 4981 aa1.83□□□□□ -2.12
SNX13-209ENST00000492626 LAMA5O15230 3695 aa1.83□□□□□ -2.12
SNX13-209ENST00000492626 IGKV2-24A0A0C4DH68 120 aa1.83□□□□□ -2.12
SNX13-209ENST00000492626 OR2T8A6NH00 312 aa1.83□□□□□ -2.12
SNX13-209ENST00000492626 TAX1BP3O14907 124 aa1.83□□□□□ -2.12
SNX13-209ENST00000492626 CNIH1O95406 144 aa1.83□□□□□ -2.12
SNX13-209ENST00000492626 CDK2P24941 298 aa1.83□□□□□ -2.12
SNX13-209ENST00000492626 ZNF141Q15928 474 aa1.83□□□□□ -2.12
SNX13-209ENST00000492626 LRRC75BQ2VPJ9 315 aa1.83□□□□□ -2.12
SNX13-209ENST00000492626 PLPPR5Q32ZL2 321 aa1.83□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms