RNA–Protein interactions for RNA: ENST00000492466.2

SS18L1-205, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18L1, Length 899 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-205ENST00000492466 LYRM9A8MSI8 78 aa10.46□□□□□ -0.73
SS18L1-205ENST00000492466 IFNA7P01567 189 aa10.46□□□□□ -0.73
SS18L1-205ENST00000492466 DEFB130BP0DP73 79 aa10.46□□□□□ -0.73
SS18L1-205ENST00000492466 DEFB130AP0DP74 79 aa10.46□□□□□ -0.73
SS18L1-205ENST00000492466 AZU1P20160 251 aa10.46□□□□□ -0.73
SS18L1-205ENST00000492466 UBE2G2P60604 165 aa10.46□□□□□ -0.73
SS18L1-205ENST00000492466 ZNF493Q6ZR52 646 aa10.46□□□□□ -0.73
SS18L1-205ENST00000492466 TCTE3Q8IZS6 198 aa10.46□□□□□ -0.73
SS18L1-205ENST00000492466 FAM213BQ8TBF2 198 aa10.46□□□□□ -0.73
SS18L1-205ENST00000492466 ST6GAL2Q96JF0 529 aa10.46□□□□□ -0.73
SS18L1-205ENST00000492466 KLLNB2CW77 178 aa10.45□□□□□ -0.74
SS18L1-205ENST00000492466 CRISP2P16562 243 aa10.45□□□□□ -0.74
SS18L1-205ENST00000492466 CD300CQ08708 224 aa10.45□□□□□ -0.74
SS18L1-205ENST00000492466 TIMM8BQ9Y5J9 83 aaPredicted RBP10.45□□□□□ -0.74
SS18L1-205ENST00000492466 SERTM2A0A1B0GWG4 89 aa10.44□□□□□ -0.74
SS18L1-205ENST00000492466 UMAD1C9J7I0 102 aa10.44□□□□□ -0.74
SS18L1-205ENST00000492466 NMBP08949 121 aa10.44□□□□□ -0.74
SS18L1-205ENST00000492466 SEC11BP0C7V7 166 aa10.44□□□□□ -0.74
SS18L1-205ENST00000492466 SUMO1P63165 101 aaKnown RBP10.44□□□□□ -0.74
SS18L1-205ENST00000492466 ZNF726P1Q15940 193 aa10.44□□□□□ -0.74
SS18L1-205ENST00000492466 ZFAND2AQ8N6M9 145 aa10.44□□□□□ -0.74
SS18L1-205ENST00000492466 ZNF680Q8NEM1 530 aa10.44□□□□□ -0.74
SS18L1-205ENST00000492466 NOP10Q9NPE3 64 aaKnown RBP10.44□□□□□ -0.74
SS18L1-205ENST00000492466 NAGKQ9UJ70 344 aa10.44□□□□□ -0.74
SS18L1-205ENST00000492466 IGHV4-4A0A075B6R2 117 aa10.43□□□□□ -0.74
SS18L1-205ENST00000492466 TRAV8-1A0A0A6YYK1 113 aa10.43□□□□□ -0.74
SS18L1-205ENST00000492466 TRBV7-9A0A0J9YWB2 115 aa10.43□□□□□ -0.74
SS18L1-205ENST00000492466 A0A1B0GV50 99 aa10.43□□□□□ -0.74
SS18L1-205ENST00000492466 F6UZH7 168 aa10.43□□□□□ -0.74
SS18L1-205ENST00000492466 C1QBP02746 253 aa10.43□□□□□ -0.74
SS18L1-205ENST00000492466 ZFP69Q49AA0 526 aa10.43□□□□□ -0.74
SS18L1-205ENST00000492466 PRR9Q5T870 116 aa10.43□□□□□ -0.74
SS18L1-205ENST00000492466 EIF5AL1Q6IS14 154 aaKnown RBP10.43□□□□□ -0.74
SS18L1-205ENST00000492466 EIF4E3Q8N5X7 224 aaKnown RBP10.43□□□□□ -0.74
SS18L1-205ENST00000492466 ARL6IP6Q8N6S5 226 aa10.43□□□□□ -0.74
SS18L1-205ENST00000492466 RNASE8Q8TDE3 154 aaKnown RBP10.43□□□□□ -0.74
SS18L1-205ENST00000492466 TMED6Q8WW62 240 aa10.43□□□□□ -0.74
SS18L1-205ENST00000492466 FAM19A4Q96LR4 140 aa10.43□□□□□ -0.74
SS18L1-205ENST00000492466 TMPRSS5Q9H3S3 457 aa10.43□□□□□ -0.74
SS18L1-205ENST00000492466 PLA2G2EQ9NZK7 142 aa10.43□□□□□ -0.74
SS18L1-205ENST00000492466 LENEPQ9Y5L5 61 aa10.43□□□□□ -0.74
SS18L1-205ENST00000492466 A0A1W2PRE2 83 aa10.42□□□□□ -0.74
SS18L1-205ENST00000492466 GGTLC3B5MD39 225 aa10.42□□□□□ -0.74
SS18L1-205ENST00000492466 TCRAP04437 139 aa10.42□□□□□ -0.74
SS18L1-205ENST00000492466 PPT1P50897 306 aa10.42□□□□□ -0.74
SS18L1-205ENST00000492466 MUC21Q5SSG8 566 aa10.42□□□□□ -0.74
SS18L1-205ENST00000492466 CYB561D1Q8N8Q1 229 aa10.42□□□□□ -0.74
SS18L1-205ENST00000492466 SGK494Q96LW2 274 aa10.42□□□□□ -0.74
SS18L1-205ENST00000492466 NDUFAF3Q9BU61 184 aa10.42□□□□□ -0.74
SS18L1-205ENST00000492466 TREM1Q9NP99 234 aa10.42□□□□□ -0.74
SS18L1-205ENST00000492466 IGHV1OR15-1A0A075B7D0 117 aa10.41□□□□□ -0.74
SS18L1-205ENST00000492466 FHITP49789 147 aa10.41□□□□□ -0.74
SS18L1-205ENST00000492466 ZNF415Q09FC8 603 aa10.41□□□□□ -0.74
SS18L1-205ENST00000492466 CST9LP1Q5W188 147 aa10.41□□□□□ -0.74
SS18L1-205ENST00000492466 SFT2D1Q8WV19 159 aa10.41□□□□□ -0.74
SS18L1-205ENST00000492466 ATG101Q9BSB4 218 aa10.41□□□□□ -0.74
SS18L1-205ENST00000492466 EPDR1Q9UM22 224 aa10.41□□□□□ -0.74
SS18L1-205ENST00000492466 GAGE12BA1L429 117 aa10.4□□□□□ -0.74
SS18L1-205ENST00000492466 F5H768 121 aa10.4□□□□□ -0.74
SS18L1-205ENST00000492466 GAGE7O76087 117 aa10.4□□□□□ -0.74
SS18L1-205ENST00000492466 ATP5G1P05496 136 aa10.4□□□□□ -0.74
SS18L1-205ENST00000492466 GAGE12FP0CL80 117 aa10.4□□□□□ -0.74
SS18L1-205ENST00000492466 GAGE12GP0CL81 117 aa10.4□□□□□ -0.74
SS18L1-205ENST00000492466 GAGE12IP0CL82 117 aa10.4□□□□□ -0.74
SS18L1-205ENST00000492466 ATP5G3P48201 142 aa10.4□□□□□ -0.74
SS18L1-205ENST00000492466 FLI1Q01543 452 aaPredicted RBP10.4□□□□□ -0.74
SS18L1-205ENST00000492466 FAM159AQ6UWV7 190 aa10.4□□□□□ -0.74
SS18L1-205ENST00000492466 DPPA3Q6W0C5 159 aa10.4□□□□□ -0.74
SS18L1-205ENST00000492466 PRNTQ86SH4 94 aa10.4□□□□□ -0.74
SS18L1-205ENST00000492466 SUN5Q8TC36 379 aa10.4□□□□□ -0.74
SS18L1-205ENST00000492466 NKX6-2Q9C056 277 aaPredicted RBP10.4□□□□□ -0.74
SS18L1-205ENST00000492466 GSN-AS1Q9NRJ2 163 aa10.4□□□□□ -0.74
SS18L1-205ENST00000492466 PLAC8L1A1L4L8 177 aa10.39□□□□□ -0.75
SS18L1-205ENST00000492466 FAM74A7A6NL05 159 aa10.39□□□□□ -0.75
SS18L1-205ENST00000492466 PEX7O00628 323 aa10.39□□□□□ -0.75
SS18L1-205ENST00000492466 H2AFB1P0C5Y9 115 aa10.39□□□□□ -0.75
SS18L1-205ENST00000492466 TMEM75Q8N9X5 138 aa10.39□□□□□ -0.75
SS18L1-205ENST00000492466 TRGV11A0A075B6L2 103 aa10.38□□□□□ -0.75
SS18L1-205ENST00000492466 TRGV2A0A075B6R0 118 aa10.38□□□□□ -0.75
SS18L1-205ENST00000492466 TRGV1A0A0A0MS02 117 aa10.38□□□□□ -0.75
SS18L1-205ENST00000492466 TRAV21A0A0B4J279 112 aa10.38□□□□□ -0.75
SS18L1-205ENST00000492466 A0A1B0GVY2 172 aa10.38□□□□□ -0.75
SS18L1-205ENST00000492466 FBLL1A6NHQ2 334 aaKnown RBP10.38□□□□□ -0.75
SS18L1-205ENST00000492466 TEX46H3BTG2 121 aa10.38□□□□□ -0.75
SS18L1-205ENST00000492466 ZNF324O75467 553 aaPredicted RBP10.38□□□□□ -0.75
SS18L1-205ENST00000492466 UBE2G1P62253 170 aa10.38□□□□□ -0.75
SS18L1-205ENST00000492466 ANXA2RQ3ZCQ2 193 aa10.38□□□□□ -0.75
SS18L1-205ENST00000492466 LGALSLQ3ZCW2 172 aaPredicted RBP10.38□□□□□ -0.75
SS18L1-205ENST00000492466 UBE2DNLQ8IWF7 75 aa10.38□□□□□ -0.75
SS18L1-205ENST00000492466 LINC00467Q9BRT7 94 aa10.38□□□□□ -0.75
SS18L1-205ENST00000492466 PSG8Q9UQ74 426 aa10.38□□□□□ -0.75
SS18L1-205ENST00000492466 ABCA13Q86UQ4 5058 aa10.37□□□□□ -0.75
SS18L1-205ENST00000492466 TMEM183BQ1AE95 376 aa10.37□□□□□ -0.75
SS18L1-205ENST00000492466 IBA57Q5T440 356 aaKnown RBP10.37□□□□□ -0.75
SS18L1-205ENST00000492466 Q6AWC8 147 aa10.37□□□□□ -0.75
SS18L1-205ENST00000492466 TMEM88Q6PEY1 159 aa10.37□□□□□ -0.75
SS18L1-205ENST00000492466 SLC51BQ86UW2 128 aa10.37□□□□□ -0.75
SS18L1-205ENST00000492466 TMEM183AQ8IXX5 376 aa10.37□□□□□ -0.75
SS18L1-205ENST00000492466 TRAV34A0A0B4J273 112 aa10.36□□□□□ -0.75
SS18L1-205ENST00000492466 PAGE4O60829 102 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms