RNA–Protein interactions for RNA: ENST00000492357.1

USP54-214, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 3

Gene USP54, Length 353 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-214ENST00000492357 HIST2H2BDQ6DRA6 164 aa7.17□□□□□ -1.26
USP54-214ENST00000492357 MORN3Q6PF18 240 aaPredicted RBP7.17□□□□□ -1.26
USP54-214ENST00000492357 FAM24BQ8N5W8 94 aa7.17□□□□□ -1.26
USP54-214ENST00000492357 OR10G8Q8NGN5 311 aa7.17□□□□□ -1.26
USP54-214ENST00000492357 C1QTNF4Q9BXJ3 329 aa7.17□□□□□ -1.26
USP54-214ENST00000492357 SMCO4Q9NRQ5 59 aa7.17□□□□□ -1.26
USP54-214ENST00000492357 COL6A5A8TX70 2615 aa7.16□□□□□ -1.26
USP54-214ENST00000492357 TRAV21A0A0B4J279 112 aa7.16□□□□□ -1.26
USP54-214ENST00000492357 IZUMO1RA6ND01 250 aa7.16□□□□□ -1.26
USP54-214ENST00000492357 K7EN84 100 aa7.16□□□□□ -1.26
USP54-214ENST00000492357 P01737 135 aa7.16□□□□□ -1.26
USP54-214ENST00000492357 MGST1P10620 155 aaKnown RBP7.16□□□□□ -1.26
USP54-214ENST00000492357 ERVFC1-1P60608 527 aa7.16□□□□□ -1.26
USP54-214ENST00000492357 RNF212Q495C1 297 aa7.16□□□□□ -1.26
USP54-214ENST00000492357 KCNIP4Q6PIL6 250 aa7.16□□□□□ -1.26
USP54-214ENST00000492357 AMTNQ6UX39 209 aa7.16□□□□□ -1.26
USP54-214ENST00000492357 ZFAND2AQ8N6M9 145 aa7.16□□□□□ -1.26
USP54-214ENST00000492357 RPS10P5Q9NQ39 176 aa7.16□□□□□ -1.26
USP54-214ENST00000492357 C19orf73Q9NVV2 129 aa7.16□□□□□ -1.26
USP54-214ENST00000492357 FBN1P35555 2871 aaKnown RBP7.15□□□□□ -1.26
USP54-214ENST00000492357 A8MWL6 223 aa7.15□□□□□ -1.26
USP54-214ENST00000492357 GATCO43716 136 aaKnown RBP7.15□□□□□ -1.26
USP54-214ENST00000492357 GPX1P07203 203 aa7.15□□□□□ -1.26
USP54-214ENST00000492357 S100PP25815 95 aa7.15□□□□□ -1.26
USP54-214ENST00000492357 TRPT1Q86TN4 253 aaKnown RBP7.15□□□□□ -1.26
USP54-214ENST00000492357 STHQ8IWL8 128 aa7.15□□□□□ -1.26
USP54-214ENST00000492357 ZC2HC1AQ96GY0 325 aa7.15□□□□□ -1.26
USP54-214ENST00000492357 KCNS1Q96KK3 526 aa7.15□□□□□ -1.26
USP54-214ENST00000492357 LINC00467Q9BRT7 94 aa7.15□□□□□ -1.26
USP54-214ENST00000492357 RPP21Q9H633 154 aaKnown RBP7.15□□□□□ -1.26
USP54-214ENST00000492357 KIR2DL5BA0A0G2JN68 375 aa7.14□□□□□ -1.27
USP54-214ENST00000492357 KIR2DL5BA0A0G2JPC4 375 aa7.14□□□□□ -1.27
USP54-214ENST00000492357 A0A1W2PPQ1 181 aa7.14□□□□□ -1.27
USP54-214ENST00000492357 PGPEP1LA6NFU8 196 aa7.14□□□□□ -1.27
USP54-214ENST00000492357 A8MZ25 164 aa7.14□□□□□ -1.27
USP54-214ENST00000492357 FOXA3P55318 350 aaPredicted RBP7.14□□□□□ -1.27
USP54-214ENST00000492357 ERCC8Q13216 396 aa7.14□□□□□ -1.27
USP54-214ENST00000492357 TDRG1Q3Y452 100 aa7.14□□□□□ -1.27
USP54-214ENST00000492357 COX19Q49B96 90 aa7.14□□□□□ -1.27
USP54-214ENST00000492357 DNLZQ5SXM8 178 aa7.14□□□□□ -1.27
USP54-214ENST00000492357 ATRAIDQ6UW56 229 aa7.14□□□□□ -1.27
USP54-214ENST00000492357 KIR2DL5AQ8N109 375 aa7.14□□□□□ -1.27
USP54-214ENST00000492357 TMEM256Q8N2U0 113 aa7.14□□□□□ -1.27
USP54-214ENST00000492357 NUDT10Q8NFP7 164 aa7.14□□□□□ -1.27
USP54-214ENST00000492357 KIR2DL5BQ8NHK3 375 aa7.14□□□□□ -1.27
USP54-214ENST00000492357 Q8TAT8 98 aa7.14□□□□□ -1.27
USP54-214ENST00000492357 TSKUQ8WUA8 353 aa7.14□□□□□ -1.27
USP54-214ENST00000492357 NUDT11Q96G61 164 aa7.14□□□□□ -1.27
USP54-214ENST00000492357 STAB1Q9NY15 2570 aa7.14□□□□□ -1.27
USP54-214ENST00000492357 IL36BQ9NZH7 164 aa7.14□□□□□ -1.27
USP54-214ENST00000492357 V9GYV3 84 aa7.14□□□□□ -1.27
USP54-214ENST00000492357 TRBV24-1A0A075B6N3 115 aa7.13□□□□□ -1.27
USP54-214ENST00000492357 C7orf71A4D174 169 aa7.13□□□□□ -1.27
USP54-214ENST00000492357 ZNF705GA8MUZ8 300 aaPredicted RBP7.13□□□□□ -1.27
USP54-214ENST00000492357 F6UB75 175 aa7.13□□□□□ -1.27
USP54-214ENST00000492357 MED14OSP0DP75 135 aa7.13□□□□□ -1.27
USP54-214ENST00000492357 IGLL1P15814 213 aa7.13□□□□□ -1.27
USP54-214ENST00000492357 ACTL10Q5JWF8 245 aa7.13□□□□□ -1.27
USP54-214ENST00000492357 RASL11AQ6T310 242 aa7.13□□□□□ -1.27
USP54-214ENST00000492357 SGK494Q96LW2 274 aa7.13□□□□□ -1.27
USP54-214ENST00000492357 TP53TG3Q9ULZ0 132 aa7.13□□□□□ -1.27
USP54-214ENST00000492357 A0A1B0GW15 77 aa7.12□□□□□ -1.27
USP54-214ENST00000492357 SMIM27A0A1W2PRY6 76 aa7.12□□□□□ -1.27
USP54-214ENST00000492357 TMEM189A5PLL7 270 aa7.12□□□□□ -1.27
USP54-214ENST00000492357 SH2D1AO60880 128 aa7.12□□□□□ -1.27
USP54-214ENST00000492357 INSP01308 110 aa7.12□□□□□ -1.27
USP54-214ENST00000492357 CD7P09564 240 aa7.12□□□□□ -1.27
USP54-214ENST00000492357 CRIP1P50238 77 aa7.12□□□□□ -1.27
USP54-214ENST00000492357 OR5I1Q13606 314 aa7.12□□□□□ -1.27
USP54-214ENST00000492357 SAMD5Q5TGI4 173 aa7.12□□□□□ -1.27
USP54-214ENST00000492357 GDF5OSQ5U4N7 250 aa7.12□□□□□ -1.27
USP54-214ENST00000492357 PRR27Q6MZM9 219 aa7.12□□□□□ -1.27
USP54-214ENST00000492357 WDR73Q6P4I2 378 aa7.12□□□□□ -1.27
USP54-214ENST00000492357 ATP5L2Q7Z4Y8 100 aa7.12□□□□□ -1.27
USP54-214ENST00000492357 NHLRC2Q8NBF2 726 aa7.12□□□□□ -1.27
USP54-214ENST00000492357 C8orf49Q96NF6 230 aa7.12□□□□□ -1.27
USP54-214ENST00000492357 MDFIQ99750 246 aa7.12□□□□□ -1.27
USP54-214ENST00000492357 PYGO2Q9BRQ0 406 aa7.12□□□□□ -1.27
USP54-214ENST00000492357 NAT8BQ9UHF3 227 aa7.12□□□□□ -1.27
USP54-214ENST00000492357 SORL1Q92673 2214 aa7.12□□□□□ -1.27
USP54-214ENST00000492357 F2Z2F3 143 aa7.11□□□□□ -1.27
USP54-214ENST00000492357 UBE2CO00762 179 aa7.11□□□□□ -1.27
USP54-214ENST00000492357 SCO1O75880 301 aa7.11□□□□□ -1.27
USP54-214ENST00000492357 S100A8P05109 93 aa7.11□□□□□ -1.27
USP54-214ENST00000492357 KPRPQ5T749 579 aaPredicted RBP7.11□□□□□ -1.27
USP54-214ENST00000492357 FAM159AQ6UWV7 190 aa7.11□□□□□ -1.27
USP54-214ENST00000492357 OR2D3Q8NGH3 330 aa7.11□□□□□ -1.27
USP54-214ENST00000492357 NDUFAF3Q9BU61 184 aa7.11□□□□□ -1.27
USP54-214ENST00000492357 RNASE7Q9H1E1 156 aaKnown RBP7.11□□□□□ -1.27
USP54-214ENST00000492357 AURKAIP1Q9NWT8 199 aaPredicted RBP7.11□□□□□ -1.27
USP54-214ENST00000492357 TRGV11A0A075B6L2 103 aa7.1□□□□□ -1.27
USP54-214ENST00000492357 KNCNA6PVL3 124 aa7.1□□□□□ -1.27
USP54-214ENST00000492357 ZNF324O75467 553 aaPredicted RBP7.1□□□□□ -1.27
USP54-214ENST00000492357 TYMSP04818 313 aa7.1□□□□□ -1.27
USP54-214ENST00000492357 OR5AL1P0C617 328 aa7.1□□□□□ -1.27
USP54-214ENST00000492357 ZNF705DP0CH99 300 aaPredicted RBP7.1□□□□□ -1.27
USP54-214ENST00000492357 ZNF705BP0CI00 300 aaPredicted RBP7.1□□□□□ -1.27
USP54-214ENST00000492357 ZNF80P51504 273 aaPredicted RBP7.1□□□□□ -1.27
USP54-214ENST00000492357 APOC4P55056 127 aa7.1□□□□□ -1.27
USP54-214ENST00000492357 PIK3CD-AS1Q5SR53 167 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms