RNA–Protein interactions for RNA: ENST00000491433.1

CLCNKA-206, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 3

Gene CLCNKA, Length 824 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-206ENST00000491433 NDUFA5Q16718 116 aa7.69□□□□□ -1.18
CLCNKA-206ENST00000491433 ESRGQ1W209 222 aa7.69□□□□□ -1.18
CLCNKA-206ENST00000491433 PCNPQ8WW12 178 aaKnown RBP7.69□□□□□ -1.18
CLCNKA-206ENST00000491433 RAB24Q969Q5 203 aa7.69□□□□□ -1.18
CLCNKA-206ENST00000491433 FAM167A-AS1Q96KT0 104 aa7.69□□□□□ -1.18
CLCNKA-206ENST00000491433 ACTR3CQ9C0K3 210 aaPredicted RBP7.69□□□□□ -1.18
CLCNKA-206ENST00000491433 PPP1R14DQ9NXH3 145 aa7.69□□□□□ -1.18
CLCNKA-206ENST00000491433 H2AFB1P0C5Y9 115 aa7.68□□□□□ -1.18
CLCNKA-206ENST00000491433 AZU1P20160 251 aa7.68□□□□□ -1.18
CLCNKA-206ENST00000491433 Q6ZRN7 208 aaPredicted RBP7.68□□□□□ -1.18
CLCNKA-206ENST00000491433 OR1L4Q8NGR5 311 aa7.68□□□□□ -1.18
CLCNKA-206ENST00000491433 OR1B1Q8NGR6 318 aa7.68□□□□□ -1.18
CLCNKA-206ENST00000491433 FAM213BQ8TBF2 198 aa7.68□□□□□ -1.18
CLCNKA-206ENST00000491433 TMEM263Q8WUH6 116 aaKnown RBP7.68□□□□□ -1.18
CLCNKA-206ENST00000491433 UHRF2Q96PU4 802 aa7.68□□□□□ -1.18
CLCNKA-206ENST00000491433 PFDN5Q99471 154 aa7.68□□□□□ -1.18
CLCNKA-206ENST00000491433 MRPL32Q9BYC8 188 aaKnown RBP7.68□□□□□ -1.18
CLCNKA-206ENST00000491433 FUT9Q9Y231 359 aa7.68□□□□□ -1.18
CLCNKA-206ENST00000491433 RAB19A4D1S5 217 aa7.67□□□□□ -1.18
CLCNKA-206ENST00000491433 SIVA1O15304 175 aa7.67□□□□□ -1.18
CLCNKA-206ENST00000491433 NDUFS6O75380 124 aaKnown RBP7.67□□□□□ -1.18
CLCNKA-206ENST00000491433 PRM2P04554 102 aa7.67□□□□□ -1.18
CLCNKA-206ENST00000491433 CDC34P49427 236 aaPredicted RBP7.67□□□□□ -1.18
CLCNKA-206ENST00000491433 RHOBP62745 196 aa7.67□□□□□ -1.18
CLCNKA-206ENST00000491433 CCL20P78556 96 aa7.67□□□□□ -1.18
CLCNKA-206ENST00000491433 C20orf173Q96LM9 149 aa7.67□□□□□ -1.18
CLCNKA-206ENST00000491433 C20orf144Q9BQM9 153 aa7.67□□□□□ -1.18
CLCNKA-206ENST00000491433 NOP10Q9NPE3 64 aaKnown RBP7.67□□□□□ -1.18
CLCNKA-206ENST00000491433 A0A0J9YY99 117 aa7.66□□□□□ -1.18
CLCNKA-206ENST00000491433 ZNF98A6NK75 572 aa7.66□□□□□ -1.18
CLCNKA-206ENST00000491433 MRPS12O15235 138 aaKnown RBP7.66□□□□□ -1.18
CLCNKA-206ENST00000491433 HYPMO75409 117 aa7.66□□□□□ -1.18
CLCNKA-206ENST00000491433 SMR3BP02814 79 aaPredicted RBP7.66□□□□□ -1.18
CLCNKA-206ENST00000491433 HTN1P15515 57 aa7.66□□□□□ -1.18
CLCNKA-206ENST00000491433 GCSHP23434 173 aa7.66□□□□□ -1.18
CLCNKA-206ENST00000491433 MORN5Q5VZ52 161 aa7.66□□□□□ -1.18
CLCNKA-206ENST00000491433 C10orf113Q5VZT2 155 aa7.66□□□□□ -1.18
CLCNKA-206ENST00000491433 FAM122CQ6P4D5 195 aa7.66□□□□□ -1.18
CLCNKA-206ENST00000491433 MIR17HGQ75NE6 70 aa7.66□□□□□ -1.18
CLCNKA-206ENST00000491433 S100A7AQ86SG5 101 aa7.66□□□□□ -1.18
CLCNKA-206ENST00000491433 CCDC28AQ8IWP9 274 aa7.66□□□□□ -1.18
CLCNKA-206ENST00000491433 SFT2D1Q8WV19 159 aa7.66□□□□□ -1.18
CLCNKA-206ENST00000491433 TRAV12-2A0A075B6T6 113 aa7.65□□□□□ -1.18
CLCNKA-206ENST00000491433 TRAV9-2A0A087WT02 112 aa7.65□□□□□ -1.18
CLCNKA-206ENST00000491433 A0A1W2PPV4 95 aa7.65□□□□□ -1.18
CLCNKA-206ENST00000491433 MAP1LC3B2A6NCE7 125 aa7.65□□□□□ -1.18
CLCNKA-206ENST00000491433 H3BRN7 92 aa7.65□□□□□ -1.18
CLCNKA-206ENST00000491433 H7BYZ3 331 aa7.65□□□□□ -1.18
CLCNKA-206ENST00000491433 RNASE8Q8TDE3 154 aaKnown RBP7.65□□□□□ -1.18
CLCNKA-206ENST00000491433 FAM210AQ96ND0 272 aa7.65□□□□□ -1.18
CLCNKA-206ENST00000491433 SHANK2-AS3Q9BTD1 123 aa7.65□□□□□ -1.18
CLCNKA-206ENST00000491433 SLC25A2Q9BXI2 301 aa7.65□□□□□ -1.18
CLCNKA-206ENST00000491433 SLC25A39Q9BZJ4 359 aaPredicted RBP7.65□□□□□ -1.18
CLCNKA-206ENST00000491433 MAP1LC3BQ9GZQ8 125 aa7.65□□□□□ -1.18
CLCNKA-206ENST00000491433 SLC25A22Q9H936 323 aa7.65□□□□□ -1.18
CLCNKA-206ENST00000491433 TMEM14CQ9P0S9 112 aa7.65□□□□□ -1.18
CLCNKA-206ENST00000491433 RNF24Q9Y225 148 aa7.65□□□□□ -1.18
CLCNKA-206ENST00000491433 SNURFLB1AK76 121 aa7.64□□□□□ -1.19
CLCNKA-206ENST00000491433 K7EP13 123 aa7.64□□□□□ -1.19
CLCNKA-206ENST00000491433 COX7A2P2O60397 106 aa7.64□□□□□ -1.19
CLCNKA-206ENST00000491433 CXorf1O96002 111 aa7.64□□□□□ -1.19
CLCNKA-206ENST00000491433 CDKN1BP46527 198 aa7.64□□□□□ -1.19
CLCNKA-206ENST00000491433 KRTAP10-1P60331 282 aa7.64□□□□□ -1.19
CLCNKA-206ENST00000491433 LCN15Q6UWW0 184 aa7.64□□□□□ -1.19
CLCNKA-206ENST00000491433 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.64□□□□□ -1.19
CLCNKA-206ENST00000491433 PQLC2Q6ZP29 291 aa7.64□□□□□ -1.19
CLCNKA-206ENST00000491433 LINC00305Q7Z4B0 112 aa7.64□□□□□ -1.19
CLCNKA-206ENST00000491433 SLC7A5P1Q8MH63 180 aa7.64□□□□□ -1.19
CLCNKA-206ENST00000491433 LINC00612Q8N6U2 182 aa7.64□□□□□ -1.19
CLCNKA-206ENST00000491433 ZNF738Q8NE65 137 aa7.64□□□□□ -1.19
CLCNKA-206ENST00000491433 TMEM70Q9BUB7 260 aa7.64□□□□□ -1.19
CLCNKA-206ENST00000491433 SMDT1Q9H4I9 107 aa7.64□□□□□ -1.19
CLCNKA-206ENST00000491433 HIGD1AQ9Y241 93 aa7.64□□□□□ -1.19
CLCNKA-206ENST00000491433 ARL2-SNX15V9GYD0 113 aa7.64□□□□□ -1.19
CLCNKA-206ENST00000491433 A0A087WTM6 91 aa7.63□□□□□ -1.19
CLCNKA-206ENST00000491433 TRAV5A0A0B4J249 113 aa7.63□□□□□ -1.19
CLCNKA-206ENST00000491433 TEX46H3BTG2 121 aa7.63□□□□□ -1.19
CLCNKA-206ENST00000491433 ORM2P19652 201 aa7.63□□□□□ -1.19
CLCNKA-206ENST00000491433 HIST1H1AQ02539 215 aaPredicted RBP7.63□□□□□ -1.19
CLCNKA-206ENST00000491433 UQCC3Q6UW78 93 aa7.63□□□□□ -1.19
CLCNKA-206ENST00000491433 OR8A1Q8NGG7 326 aa7.63□□□□□ -1.19
CLCNKA-206ENST00000491433 TMPRSS5Q9H3S3 457 aa7.63□□□□□ -1.19
CLCNKA-206ENST00000491433 RBFOX3A6NFN3 312 aa7.62□□□□□ -1.19
CLCNKA-206ENST00000491433 EIF3GO75821 320 aaKnown RBP eCLIP7.62□□□□□ -1.19
CLCNKA-206ENST00000491433 PLA2G1BP04054 148 aaKnown RBP7.62□□□□□ -1.19
CLCNKA-206ENST00000491433 ARL14EPLP0DKL9 152 aa7.62□□□□□ -1.19
CLCNKA-206ENST00000491433 RPL7P18124 248 aaKnown RBP7.62□□□□□ -1.19
CLCNKA-206ENST00000491433 HOXA5P20719 270 aa7.62□□□□□ -1.19
CLCNKA-206ENST00000491433 GCHFRP30047 84 aa7.62□□□□□ -1.19
CLCNKA-206ENST00000491433 TAGLN2P37802 199 aaKnown RBP7.62□□□□□ -1.19
CLCNKA-206ENST00000491433 PPT1P50897 306 aa7.62□□□□□ -1.19
CLCNKA-206ENST00000491433 FGF8P55075 233 aaPredicted RBP7.62□□□□□ -1.19
CLCNKA-206ENST00000491433 TAS2R45P59539 299 aa7.62□□□□□ -1.19
CLCNKA-206ENST00000491433 SRSF3P84103 164 aaKnown RBP7.62□□□□□ -1.19
CLCNKA-206ENST00000491433 KHDC3LQ587J8 217 aa7.62□□□□□ -1.19
CLCNKA-206ENST00000491433 ZNF506Q5JVG8 444 aa7.62□□□□□ -1.19
CLCNKA-206ENST00000491433 FXYD5Q96DB9 178 aa7.62□□□□□ -1.19
CLCNKA-206ENST00000491433 OR51M1Q9H341 326 aa7.62□□□□□ -1.19
CLCNKA-206ENST00000491433 A0A096LPF7 62 aa7.61□□□□□ -1.19
CLCNKA-206ENST00000491433 GAGE12BA1L429 117 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms