RNA–Protein interactions for RNA: ENST00000490993.5

NPHP3-208, Transcript of nephrocystin 3, humanhuman

TSL 5

Gene NPHP3, Length 5,197 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-208ENST00000490993 SIGLEC8Q9NYZ4 499 aa5.67□□□□□ -1.5
NPHP3-208ENST00000490993 DSCAMO60469 2012 aa5.67□□□□□ -1.5
NPHP3-208ENST00000490993 TRBV7-9A0A0J9YWB2 115 aa5.67□□□□□ -1.5
NPHP3-208ENST00000490993 SMKR1H3BMG3 65 aa5.67□□□□□ -1.5
NPHP3-208ENST00000490993 J3QR89 54 aa5.67□□□□□ -1.5
NPHP3-208ENST00000490993 ZNF415Q09FC8 603 aa5.67□□□□□ -1.5
NPHP3-208ENST00000490993 PRR31Q5SQ13 230 aa5.67□□□□□ -1.5
NPHP3-208ENST00000490993 ZNF493Q6ZR52 646 aa5.67□□□□□ -1.5
NPHP3-208ENST00000490993 UBE2E2Q96LR5 201 aa5.67□□□□□ -1.5
NPHP3-208ENST00000490993 IGHV3OR16-12A0A075B7B8 117 aa5.66□□□□□ -1.5
NPHP3-208ENST00000490993 A0A1W2PRX2 142 aa5.66□□□□□ -1.5
NPHP3-208ENST00000490993 ANXA2RQ3ZCQ2 193 aa5.66□□□□□ -1.5
NPHP3-208ENST00000490993 TMEM86BQ8N661 226 aa5.66□□□□□ -1.5
NPHP3-208ENST00000490993 C14orf178Q8N769 122 aaPredicted RBP5.66□□□□□ -1.5
NPHP3-208ENST00000490993 MKI67P46013 3256 aaKnown RBP5.66□□□□□ -1.5
NPHP3-208ENST00000490993 K7EMI3 77 aa5.66□□□□□ -1.5
NPHP3-208ENST00000490993 NUPR1O60356 82 aa5.66□□□□□ -1.5
NPHP3-208ENST00000490993 PLNP26678 52 aa5.66□□□□□ -1.5
NPHP3-208ENST00000490993 TMEM158Q8WZ71 300 aa5.66□□□□□ -1.5
NPHP3-208ENST00000490993 ZFAND3Q9H8U3 227 aa5.66□□□□□ -1.5
NPHP3-208ENST00000490993 CHTOPQ9Y3Y2 248 aaKnown RBP5.66□□□□□ -1.5
NPHP3-208ENST00000490993 BDP1A6H8Y1 2624 aa5.66□□□□□ -1.5
NPHP3-208ENST00000490993 KIR2DL5BA0A0G2JN68 375 aa5.66□□□□□ -1.5
NPHP3-208ENST00000490993 KIR2DL5BA0A0G2JPC4 375 aa5.66□□□□□ -1.5
NPHP3-208ENST00000490993 MED14OSP0DP75 135 aa5.66□□□□□ -1.5
NPHP3-208ENST00000490993 LGALS3P17931 250 aaKnown RBP5.66□□□□□ -1.5
NPHP3-208ENST00000490993 CDKN1BP46527 198 aa5.66□□□□□ -1.5
NPHP3-208ENST00000490993 MRGPRG-AS1Q2M3A8 158 aa5.66□□□□□ -1.5
NPHP3-208ENST00000490993 LGALS9BQ3B8N2 356 aa5.66□□□□□ -1.5
NPHP3-208ENST00000490993 TCTEX1D4Q5JR98 221 aa5.66□□□□□ -1.5
NPHP3-208ENST00000490993 LGALS9CQ6DKI2 356 aa5.66□□□□□ -1.5
NPHP3-208ENST00000490993 FOXI2Q6ZQN5 318 aa5.66□□□□□ -1.5
NPHP3-208ENST00000490993 KIR2DL5AQ8N109 375 aa5.66□□□□□ -1.5
NPHP3-208ENST00000490993 C20orf78Q9BR46 151 aa5.66□□□□□ -1.5
NPHP3-208ENST00000490993 INSP01308 110 aa5.66□□□□□ -1.5
NPHP3-208ENST00000490993 PRSS57Q6UWY2 283 aa5.66□□□□□ -1.5
NPHP3-208ENST00000490993 HIST1H4GQ99525 98 aa5.66□□□□□ -1.5
NPHP3-208ENST00000490993 TANC2Q9HCD6 1990 aa5.65□□□□□ -1.5
NPHP3-208ENST00000490993 IGHV1OR15-1A0A075B7D0 117 aa5.65□□□□□ -1.5
NPHP3-208ENST00000490993 NPYP01303 97 aa5.65□□□□□ -1.5
NPHP3-208ENST00000490993 IGHG4P01861 327 aa5.65□□□□□ -1.5
NPHP3-208ENST00000490993 GCSHP23434 173 aa5.65□□□□□ -1.5
NPHP3-208ENST00000490993 TCTAP57738 103 aa5.65□□□□□ -1.5
NPHP3-208ENST00000490993 LINC01548A6NM66 108 aa5.65□□□□□ -1.51
NPHP3-208ENST00000490993 VWC2LB2RUY7 222 aa5.65□□□□□ -1.51
NPHP3-208ENST00000490993 HOXD3P31249 432 aaPredicted RBP5.65□□□□□ -1.51
NPHP3-208ENST00000490993 CRIP2P52943 208 aaPredicted RBP5.65□□□□□ -1.51
NPHP3-208ENST00000490993 SEC11AP67812 179 aa5.65□□□□□ -1.51
NPHP3-208ENST00000490993 UBE2L6O14933 153 aa5.65□□□□□ -1.51
NPHP3-208ENST00000490993 SMIM13P0DJ93 91 aa5.65□□□□□ -1.51
NPHP3-208ENST00000490993 IGLC3P0DOY3 106 aa5.65□□□□□ -1.51
NPHP3-208ENST00000490993 COTL1Q14019 142 aa5.65□□□□□ -1.51
NPHP3-208ENST00000490993 NRGNQ92686 78 aa5.65□□□□□ -1.51
NPHP3-208ENST00000490993 IGLV2-11P01706 119 aa5.64□□□□□ -1.51
NPHP3-208ENST00000490993 FABP2P12104 132 aa5.64□□□□□ -1.51
NPHP3-208ENST00000490993 DEFB131AP59861 70 aa5.64□□□□□ -1.51
NPHP3-208ENST00000490993 SUMO2P61956 95 aaKnown RBP5.64□□□□□ -1.51
NPHP3-208ENST00000490993 HSD52Q0P140 79 aa5.64□□□□□ -1.51
NPHP3-208ENST00000490993 LINC00322Q6ZN03 302 aaPredicted RBP5.64□□□□□ -1.51
NPHP3-208ENST00000490993 WFDC12Q8WWY7 111 aa5.64□□□□□ -1.51
NPHP3-208ENST00000490993 CSTL1Q9H114 145 aa5.64□□□□□ -1.51
NPHP3-208ENST00000490993 ZNF256Q9Y2P7 627 aaPredicted RBP5.64□□□□□ -1.51
NPHP3-208ENST00000490993 hDV102S1A0JD36 115 aa5.64□□□□□ -1.51
NPHP3-208ENST00000490993 PRAC2D3DTV9 90 aa5.64□□□□□ -1.51
NPHP3-208ENST00000490993 TRPT1Q86TN4 253 aaKnown RBP5.64□□□□□ -1.51
NPHP3-208ENST00000490993 NBASA2RRP1 2371 aa5.64□□□□□ -1.51
NPHP3-208ENST00000490993 TRAV8-6A0A0B4J262 113 aa5.64□□□□□ -1.51
NPHP3-208ENST00000490993 A0A1W2PPR1 153 aa5.64□□□□□ -1.51
NPHP3-208ENST00000490993 BRI3O95415 125 aa5.64□□□□□ -1.51
NPHP3-208ENST00000490993 LURAP1LQ8IV03 231 aa5.64□□□□□ -1.51
NPHP3-208ENST00000490993 ZNF843Q8N446 348 aa5.64□□□□□ -1.51
NPHP3-208ENST00000490993 CBY1Q9Y3M2 126 aa5.64□□□□□ -1.51
NPHP3-208ENST00000490993 GAGE10A6NGK3 116 aa5.64□□□□□ -1.51
NPHP3-208ENST00000490993 FRMD6-AS1P0C7T7 363 aa5.64□□□□□ -1.51
NPHP3-208ENST00000490993 AMMECR1LQ6DCA0 310 aa5.64□□□□□ -1.51
NPHP3-208ENST00000490993 Q6YL49 198 aa5.64□□□□□ -1.51
NPHP3-208ENST00000490993 ZNF747Q9BV97 191 aa5.64□□□□□ -1.51
NPHP3-208ENST00000490993 Q1RN00 199 aa5.63□□□□□ -1.51
NPHP3-208ENST00000490993 BCL6BQ8N143 479 aaPredicted RBP5.63□□□□□ -1.51
NPHP3-208ENST00000490993 C1QTNF4Q9BXJ3 329 aa5.63□□□□□ -1.51
NPHP3-208ENST00000490993 SAP30O75446 220 aa5.63□□□□□ -1.51
NPHP3-208ENST00000490993 SCGB1C2P0DMR2 95 aa5.63□□□□□ -1.51
NPHP3-208ENST00000490993 TMEM95Q3KNT9 176 aa5.63□□□□□ -1.51
NPHP3-208ENST00000490993 TMEM170BQ5T4T1 132 aa5.63□□□□□ -1.51
NPHP3-208ENST00000490993 CDPF1Q6NVV7 123 aa5.63□□□□□ -1.51
NPHP3-208ENST00000490993 SMAD5-AS1Q9Y6J3 95 aa5.63□□□□□ -1.51
NPHP3-208ENST00000490993 IGHV4-31P0DP07 118 aa5.63□□□□□ -1.51
NPHP3-208ENST00000490993 COPS9Q8WXC6 57 aa5.63□□□□□ -1.51
NPHP3-208ENST00000490993 SMIM2Q9BVW6 85 aa5.63□□□□□ -1.51
NPHP3-208ENST00000490993 VCX2Q9H322 139 aa5.63□□□□□ -1.51
NPHP3-208ENST00000490993 CACNA1BQ00975 2339 aa5.63□□□□□ -1.51
NPHP3-208ENST00000490993 RHODO00212 210 aa5.63□□□□□ -1.51
NPHP3-208ENST00000490993 MRPS12O15235 138 aaKnown RBP5.63□□□□□ -1.51
NPHP3-208ENST00000490993 ORAOV1Q8WV07 137 aa5.63□□□□□ -1.51
NPHP3-208ENST00000490993 TMEM141Q96I45 108 aa5.63□□□□□ -1.51
NPHP3-208ENST00000490993 SELENOKQ9Y6D0 94 aa5.63□□□□□ -1.51
NPHP3-208ENST00000490993 LGALS9O00182 355 aa5.62□□□□□ -1.51
NPHP3-208ENST00000490993 UNQ9165/PRO28630Q6UXU0 137 aa5.62□□□□□ -1.51
NPHP3-208ENST00000490993 GEMIN7Q9H840 131 aaKnown RBP5.62□□□□□ -1.51
NPHP3-208ENST00000490993 IGLC6P0CF74 106 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms