RNA–Protein interactions for RNA: ENST00000490663.1

C4A-256, Transcript of complement C4A (Rodgers blood group), human

TSL 2

Gene C4A, Length 524 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
C4A-256	ENST00000490663	RYR2	Q92736	4967 aa		13.19	□□□□□ -0.3
C4A-256	ENST00000490663	TCRA	P04437	139 aa		13.19	□□□□□ -0.3
C4A-256	ENST00000490663	MUC21	Q5SSG8	566 aa		13.19	□□□□□ -0.3
C4A-256	ENST00000490663	FAM74A7	A6NL05	159 aa		13.18	□□□□□ -0.3
C4A-256	ENST00000490663	C11orf94	C9JXX5	98 aa		13.18	□□□□□ -0.3
C4A-256	ENST00000490663	CCDC28A	Q8IWP9	274 aa		13.18	□□□□□ -0.3
C4A-256	ENST00000490663	C9orf62	Q8N4C0	152 aa		13.18	□□□□□ -0.3
C4A-256	ENST00000490663	STOML3	Q8TAV4	291 aa		13.18	□□□□□ -0.3
C4A-256	ENST00000490663	C8orf49	Q96NF6	230 aa		13.18	□□□□□ -0.3
C4A-256	ENST00000490663	PYGO2	Q9BRQ0	406 aa		13.18	□□□□□ -0.3
C4A-256	ENST00000490663	HYDIN	Q4G0P3	5121 aa		13.18	□□□□□ -0.3
C4A-256	ENST00000490663	IGHV4-4	A0A075B6R2	117 aa		13.17	□□□□□ -0.3
C4A-256	ENST00000490663	TRAV34	A0A0B4J273	112 aa		13.17	□□□□□ -0.3
C4A-256	ENST00000490663		A0A1W2PRE2	83 aa		13.17	□□□□□ -0.3
C4A-256	ENST00000490663	CBY3	A6NI87	242 aa		13.17	□□□□□ -0.3
C4A-256	ENST00000490663	RGS13	O14921	159 aa		13.17	□□□□□ -0.3
C4A-256	ENST00000490663	NKX2-5	P52952	324 aa	Predicted RBP	13.17	□□□□□ -0.3
C4A-256	ENST00000490663	SFT2D1	Q8WV19	159 aa		13.17	□□□□□ -0.3
C4A-256	ENST00000490663	LINC00476	Q8WZB0	136 aa		13.17	□□□□□ -0.3
C4A-256	ENST00000490663	LINC00479	Q96M42	142 aa		13.17	□□□□□ -0.3
C4A-256	ENST00000490663	GSN-AS1	Q9NRJ2	163 aa		13.17	□□□□□ -0.3
C4A-256	ENST00000490663	EPDR1	Q9UM22	224 aa		13.17	□□□□□ -0.3
C4A-256	ENST00000490663	TEX48	A0A1B0GUV7	120 aa		13.16	□□□□□ -0.3
C4A-256	ENST00000490663	LYRM9	A8MSI8	78 aa		13.16	□□□□□ -0.3
C4A-256	ENST00000490663	LY6G6C	O95867	125 aa		13.16	□□□□□ -0.3
C4A-256	ENST00000490663	IFNA7	P01567	189 aa		13.16	□□□□□ -0.3
C4A-256	ENST00000490663	ATP5G3	P48201	142 aa		13.16	□□□□□ -0.3
C4A-256	ENST00000490663	EIF5A	P63241	154 aa	Known RBP	13.16	□□□□□ -0.3
C4A-256	ENST00000490663	ZFP69	Q49AA0	526 aa		13.16	□□□□□ -0.3
C4A-256	ENST00000490663	PRNT	Q86SH4	94 aa		13.16	□□□□□ -0.3
C4A-256	ENST00000490663	EIF4E3	Q8N5X7	224 aa	Known RBP	13.16	□□□□□ -0.3
C4A-256	ENST00000490663	NAGK	Q9UJ70	344 aa		13.16	□□□□□ -0.3
C4A-256	ENST00000490663	APLN	Q9ULZ1	77 aa		13.16	□□□□□ -0.3
C4A-256	ENST00000490663	TIMM8B	Q9Y5J9	83 aa	Predicted RBP	13.16	□□□□□ -0.3
C4A-256	ENST00000490663	IGHV1OR15-1	A0A075B7D0	117 aa		13.15	□□□□□ -0.3
C4A-256	ENST00000490663	SNURFL	B1AK76	121 aa		13.15	□□□□□ -0.3
C4A-256	ENST00000490663	UMAD1	C9J7I0	102 aa		13.15	□□□□□ -0.3
C4A-256	ENST00000490663	IGLV2-11	P01706	119 aa		13.15	□□□□□ -0.3
C4A-256	ENST00000490663	NMB	P08949	121 aa		13.15	□□□□□ -0.3
C4A-256	ENST00000490663	ZNF493	Q6ZR52	646 aa		13.15	□□□□□ -0.3
C4A-256	ENST00000490663	CYB561D1	Q8N8Q1	229 aa		13.15	□□□□□ -0.3
C4A-256	ENST00000490663	C11orf72	Q8NBR9	251 aa		13.15	□□□□□ -0.3
C4A-256	ENST00000490663	TREM1	Q9NP99	234 aa		13.15	□□□□□ -0.3
C4A-256	ENST00000490663	PSG8	Q9UQ74	426 aa		13.15	□□□□□ -0.3
C4A-256	ENST00000490663	KLF12	Q9Y4X4	402 aa		13.15	□□□□□ -0.3
C4A-256	ENST00000490663	GAGE12B	A1L429	117 aa		13.14	□□□□□ -0.31
C4A-256	ENST00000490663	PEX7	O00628	323 aa		13.14	□□□□□ -0.31
C4A-256	ENST00000490663	PAGE4	O60829	102 aa		13.14	□□□□□ -0.31
C4A-256	ENST00000490663	GAGE7	O76087	117 aa		13.14	□□□□□ -0.31
C4A-256	ENST00000490663	GAGE12F	P0CL80	117 aa		13.14	□□□□□ -0.31
C4A-256	ENST00000490663	GAGE12G	P0CL81	117 aa		13.14	□□□□□ -0.31
C4A-256	ENST00000490663	GAGE12I	P0CL82	117 aa		13.14	□□□□□ -0.31
C4A-256	ENST00000490663	FLI1	Q01543	452 aa	Predicted RBP	13.14	□□□□□ -0.31
C4A-256	ENST00000490663	CST9LP1	Q5W188	147 aa		13.14	□□□□□ -0.31
C4A-256	ENST00000490663	ARL6IP6	Q8N6S5	226 aa		13.14	□□□□□ -0.31
C4A-256	ENST00000490663	MBD3L1	Q8WWY6	194 aa		13.14	□□□□□ -0.31
C4A-256	ENST00000490663	ATG101	Q9BSB4	218 aa		13.14	□□□□□ -0.31
C4A-256	ENST00000490663	LENEP	Q9Y5L5	61 aa		13.14	□□□□□ -0.31
C4A-256	ENST00000490663	TRBV7-9	A0A0J9YWB2	115 aa		13.13	□□□□□ -0.31
C4A-256	ENST00000490663	H2AFB1	P0C5Y9	115 aa		13.13	□□□□□ -0.31
C4A-256	ENST00000490663	ZNF80	P51504	273 aa	Predicted RBP	13.13	□□□□□ -0.31
C4A-256	ENST00000490663		Q6AWC8	147 aa		13.13	□□□□□ -0.31
C4A-256	ENST00000490663		Q6ZTI0	123 aa		13.13	□□□□□ -0.31
C4A-256	ENST00000490663		K7EQM0	130 aa		13.12	□□□□□ -0.31
C4A-256	ENST00000490663	SLC51B	Q86UW2	128 aa		13.12	□□□□□ -0.31
C4A-256	ENST00000490663	TMEM75	Q8N9X5	138 aa		13.12	□□□□□ -0.31
C4A-256	ENST00000490663	BOLA1	Q9Y3E2	137 aa		13.12	□□□□□ -0.31
C4A-256	ENST00000490663	SERTM2	A0A1B0GWG4	89 aa		13.11	□□□□□ -0.31
C4A-256	ENST00000490663	CCL20	P78556	96 aa		13.11	□□□□□ -0.31
C4A-256	ENST00000490663	TMEM183B	Q1AE95	376 aa		13.11	□□□□□ -0.31
C4A-256	ENST00000490663	ANXA2R	Q3ZCQ2	193 aa		13.11	□□□□□ -0.31
C4A-256	ENST00000490663	TMEM88	Q6PEY1	159 aa		13.11	□□□□□ -0.31
C4A-256	ENST00000490663	DPPA3	Q6W0C5	159 aa		13.11	□□□□□ -0.31
C4A-256	ENST00000490663		Q86TA4	180 aa		13.11	□□□□□ -0.31
C4A-256	ENST00000490663	TMEM183A	Q8IXX5	376 aa		13.11	□□□□□ -0.31
C4A-256	ENST00000490663	LINC00467	Q9BRT7	94 aa		13.11	□□□□□ -0.31
C4A-256	ENST00000490663	NDFIP1	Q9BT67	221 aa		13.11	□□□□□ -0.31
C4A-256	ENST00000490663	MRPL16	Q9NX20	251 aa	Known RBP	13.11	□□□□□ -0.31
C4A-256	ENST00000490663	VPS13D	Q5THJ4	4388 aa		13.1	□□□□□ -0.31
C4A-256	ENST00000490663		F5H768	121 aa		13.1	□□□□□ -0.31
C4A-256	ENST00000490663	GCG	P01275	180 aa		13.1	□□□□□ -0.31
C4A-256	ENST00000490663	SULT1A2	P50226	295 aa		13.1	□□□□□ -0.31
C4A-256	ENST00000490663	TCL1A	P56279	114 aa		13.1	□□□□□ -0.31
C4A-256	ENST00000490663	ZNF680	Q8NEM1	530 aa		13.1	□□□□□ -0.31
C4A-256	ENST00000490663	MDFIC	Q9P1T7	246 aa		13.1	□□□□□ -0.31
C4A-256	ENST00000490663	C11orf21	Q9P2W6	132 aa		13.1	□□□□□ -0.31
C4A-256	ENST00000490663	ARL2-SNX15	V9GYD0	113 aa		13.1	□□□□□ -0.31
C4A-256	ENST00000490663	TRGV1	A0A0A0MS02	117 aa		13.09	□□□□□ -0.31
C4A-256	ENST00000490663	GNRH2	O43555	120 aa		13.09	□□□□□ -0.31
C4A-256	ENST00000490663	FAM159A	Q6UWV7	190 aa		13.09	□□□□□ -0.31
C4A-256	ENST00000490663	TRAV21	A0A0B4J279	112 aa		13.08	□□□□□ -0.32
C4A-256	ENST00000490663	SCO2	A0A1W2PP80	73 aa		13.08	□□□□□ -0.32
C4A-256	ENST00000490663	ATP5G1	P05496	136 aa		13.08	□□□□□ -0.32
C4A-256	ENST00000490663	ZNF415	Q09FC8	603 aa		13.08	□□□□□ -0.32
C4A-256	ENST00000490663	LINC00612	Q8N6U2	182 aa		13.08	□□□□□ -0.32
C4A-256	ENST00000490663	NDUFAF3	Q9BU61	184 aa		13.08	□□□□□ -0.32
C4A-256	ENST00000490663	TYMS	P04818	313 aa		13.07	□□□□□ -0.32
C4A-256	ENST00000490663	DAZ2	Q13117	558 aa	Known RBP	13.07	□□□□□ -0.32
C4A-256	ENST00000490663	EIF5AL1	Q6IS14	154 aa	Known RBP	13.07	□□□□□ -0.32
C4A-256	ENST00000490663	ALKAL2	Q6UX46	152 aa		13.07	□□□□□ -0.32

Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms