RNA–Protein interactions for RNA: ENST00000490557.1

HMGB1P38-201, Transcript of high mobility group box 1 pseudogene 38, humanhuman

BASIC

Gene HMGB1P38, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P38-201ENST00000490557 ANAPC1Q9H1A4 1944 aa2.2□□□□□ -2.06
HMGB1P38-201ENST00000490557 CCDC88AQ3V6T2 1871 aa2.2□□□□□ -2.06
HMGB1P38-201ENST00000490557 IGLV10-54A0A075B6I4 117 aa2.19□□□□□ -2.06
HMGB1P38-201ENST00000490557 ODF3BA8MYP8 253 aa2.19□□□□□ -2.06
HMGB1P38-201ENST00000490557 B4DSR2 109 aa2.19□□□□□ -2.06
HMGB1P38-201ENST00000490557 J3QRE1 110 aa2.19□□□□□ -2.06
HMGB1P38-201ENST00000490557 EDF1O60869 148 aaKnown RBP2.19□□□□□ -2.06
HMGB1P38-201ENST00000490557 SPINK8P0C7L1 97 aa2.19□□□□□ -2.06
HMGB1P38-201ENST00000490557 IFITM1P13164 125 aa2.19□□□□□ -2.06
HMGB1P38-201ENST00000490557 ZNF791Q3KP31 576 aaPredicted RBP2.19□□□□□ -2.06
HMGB1P38-201ENST00000490557 C9orf153Q5TBE3 101 aa2.19□□□□□ -2.06
HMGB1P38-201ENST00000490557 PLPP5Q8NEB5 264 aa2.19□□□□□ -2.06
HMGB1P38-201ENST00000490557 Q9H521 79 aa2.19□□□□□ -2.06
HMGB1P38-201ENST00000490557 ABCC10Q5T3U5 1492 aa2.19□□□□□ -2.06
HMGB1P38-201ENST00000490557 CECR2Q9BXF3 1484 aa2.19□□□□□ -2.06
HMGB1P38-201ENST00000490557 GREB1Q4ZG55 1949 aa2.19□□□□□ -2.06
HMGB1P38-201ENST00000490557 WDR97A6NE52 1622 aa2.18□□□□□ -2.06
HMGB1P38-201ENST00000490557 PRR14LQ5THK1 2151 aa2.18□□□□□ -2.06
HMGB1P38-201ENST00000490557 MCRIP1C9JLW8 97 aa2.18□□□□□ -2.06
HMGB1P38-201ENST00000490557 J3QLW9 94 aa2.18□□□□□ -2.06
HMGB1P38-201ENST00000490557 PITX3O75364 302 aa2.18□□□□□ -2.06
HMGB1P38-201ENST00000490557 MIFP14174 115 aa2.18□□□□□ -2.06
HMGB1P38-201ENST00000490557 SSR2P43308 183 aa2.18□□□□□ -2.06
HMGB1P38-201ENST00000490557 DSCR4P56555 118 aaPredicted RBP2.18□□□□□ -2.06
HMGB1P38-201ENST00000490557 ARPINQ7Z6K5 226 aa2.18□□□□□ -2.06
HMGB1P38-201ENST00000490557 C5orf17Q8NAS9 161 aa2.18□□□□□ -2.06
HMGB1P38-201ENST00000490557 SNHG12Q9BXW3 62 aa2.18□□□□□ -2.06
HMGB1P38-201ENST00000490557 PTPRSQ13332 1948 aa2.18□□□□□ -2.06
HMGB1P38-201ENST00000490557 TRPM6Q9BX84 2022 aa2.18□□□□□ -2.06
HMGB1P38-201ENST00000490557 CFTRP13569 1480 aa2.18□□□□□ -2.06
HMGB1P38-201ENST00000490557 RB1CC1Q8TDY2 1594 aa2.18□□□□□ -2.06
HMGB1P38-201ENST00000490557 DIDO1Q9BTC0 2240 aaKnown RBP2.18□□□□□ -2.06
HMGB1P38-201ENST00000490557 MYO5AQ9Y4I1 1855 aaKnown RBP2.18□□□□□ -2.06
HMGB1P38-201ENST00000490557 MALRD1Q5VYJ5 2156 aa2.17□□□□□ -2.06
HMGB1P38-201ENST00000490557 MUC21A0A0G2JKD1 596 aa2.17□□□□□ -2.06
HMGB1P38-201ENST00000490557 MUC21A0A140T8X8 626 aa2.17□□□□□ -2.06
HMGB1P38-201ENST00000490557 A0A1W2PNM2 257 aa2.17□□□□□ -2.06
HMGB1P38-201ENST00000490557 A6NN06 94 aa2.17□□□□□ -2.06
HMGB1P38-201ENST00000490557 E7EUB6 86 aa2.17□□□□□ -2.06
HMGB1P38-201ENST00000490557 C5orf67F2Z3F1 127 aa2.17□□□□□ -2.06
HMGB1P38-201ENST00000490557 ASAH2BP0C7U1 165 aa2.17□□□□□ -2.06
HMGB1P38-201ENST00000490557 OR2T2Q6IF00 324 aa2.17□□□□□ -2.06
HMGB1P38-201ENST00000490557 CASC2Q6XLA1 102 aa2.17□□□□□ -2.06
HMGB1P38-201ENST00000490557 TTC9CQ8N5M4 171 aa2.17□□□□□ -2.06
HMGB1P38-201ENST00000490557 VSTM2AQ8TAG5 236 aa2.17□□□□□ -2.06
HMGB1P38-201ENST00000490557 ZCCHC13Q8WW36 166 aaKnown RBP2.17□□□□□ -2.06
HMGB1P38-201ENST00000490557 SPTSSAQ969W0 71 aa2.17□□□□□ -2.06
HMGB1P38-201ENST00000490557 LINC00526Q96FQ7 95 aa2.17□□□□□ -2.06
HMGB1P38-201ENST00000490557 Q9BRP9 147 aa2.17□□□□□ -2.06
HMGB1P38-201ENST00000490557 ZFYVE16Q7Z3T8 1539 aa2.17□□□□□ -2.06
HMGB1P38-201ENST00000490557 PPIP5K1Q6PFW1 1433 aa2.17□□□□□ -2.06
HMGB1P38-201ENST00000490557 TTC37Q6PGP7 1564 aa2.16□□□□□ -2.06
HMGB1P38-201ENST00000490557 CUL9Q8IWT3 2517 aa2.16□□□□□ -2.06
HMGB1P38-201ENST00000490557 TCRBV4S1A1TA0A5B7 111 aa2.16□□□□□ -2.06
HMGB1P38-201ENST00000490557 IBA57-AS1B1ANH7 110 aa2.16□□□□□ -2.06
HMGB1P38-201ENST00000490557 ERC2-IT1O76042 136 aa2.16□□□□□ -2.06
HMGB1P38-201ENST00000490557 SNCGO76070 127 aa2.16□□□□□ -2.06
HMGB1P38-201ENST00000490557 MPC2O95563 127 aa2.16□□□□□ -2.06
HMGB1P38-201ENST00000490557 IL5P05113 134 aa2.16□□□□□ -2.06
HMGB1P38-201ENST00000490557 CTSGP08311 255 aa2.16□□□□□ -2.06
HMGB1P38-201ENST00000490557 RPL26P61254 145 aaKnown RBP2.16□□□□□ -2.06
HMGB1P38-201ENST00000490557 Q6AWC8 147 aa2.16□□□□□ -2.06
HMGB1P38-201ENST00000490557 C2orf82Q6UX34 121 aa2.16□□□□□ -2.06
HMGB1P38-201ENST00000490557 TMEM242Q9NWH2 141 aa2.16□□□□□ -2.06
HMGB1P38-201ENST00000490557 SHANK3Q9BYB0 1731 aa2.16□□□□□ -2.06
HMGB1P38-201ENST00000490557 MAPKBP1O60336 1514 aa2.16□□□□□ -2.06
HMGB1P38-201ENST00000490557 WDR90Q96KV7 1748 aa2.15□□□□□ -2.07
HMGB1P38-201ENST00000490557 A0A087WSZ3 146 aa2.15□□□□□ -2.07
HMGB1P38-201ENST00000490557 TRAV10A0A0B4J240 114 aa2.15□□□□□ -2.07
HMGB1P38-201ENST00000490557 A0A1W2PRS3 328 aa2.15□□□□□ -2.07
HMGB1P38-201ENST00000490557 E7EQL1 145 aa2.15□□□□□ -2.07
HMGB1P38-201ENST00000490557 PIPP12273 146 aaPredicted RBP2.15□□□□□ -2.07
HMGB1P38-201ENST00000490557 BRS3P32247 399 aa2.15□□□□□ -2.07
HMGB1P38-201ENST00000490557 NPC2P61916 151 aa2.15□□□□□ -2.07
HMGB1P38-201ENST00000490557 DEFB113Q30KQ7 82 aa2.15□□□□□ -2.07
HMGB1P38-201ENST00000490557 KRTAP5-7Q6L8G8 165 aa2.15□□□□□ -2.07
HMGB1P38-201ENST00000490557 Q6ZTI0 123 aa2.15□□□□□ -2.07
HMGB1P38-201ENST00000490557 LINC00269Q8N2A0 174 aa2.15□□□□□ -2.07
HMGB1P38-201ENST00000490557 FAM19A2Q8N3H0 131 aa2.15□□□□□ -2.07
HMGB1P38-201ENST00000490557 LSM10Q969L4 123 aaKnown RBP2.15□□□□□ -2.07
HMGB1P38-201ENST00000490557 AQP10Q96PS8 301 aa2.15□□□□□ -2.07
HMGB1P38-201ENST00000490557 FAIMQ9NVQ4 179 aa2.15□□□□□ -2.07
HMGB1P38-201ENST00000490557 LHFPL6Q9Y693 200 aa2.15□□□□□ -2.07
HMGB1P38-201ENST00000490557 V9GYS6 101 aa2.15□□□□□ -2.07
HMGB1P38-201ENST00000490557 ZFC3H1O60293 1989 aaKnown RBP2.15□□□□□ -2.07
HMGB1P38-201ENST00000490557 KIAA2026Q5HYC2 2103 aa2.15□□□□□ -2.07
HMGB1P38-201ENST00000490557 RAPGEF2Q9Y4G8 1499 aa2.14□□□□□ -2.07
HMGB1P38-201ENST00000490557 TANC2Q9HCD6 1990 aa2.14□□□□□ -2.07
HMGB1P38-201ENST00000490557 SBF1O95248 1867 aa2.14□□□□□ -2.07
HMGB1P38-201ENST00000490557 CITO14578 2027 aa2.14□□□□□ -2.07
HMGB1P38-201ENST00000490557 TCRBV3S1A0A5B6 114 aa2.14□□□□□ -2.07
HMGB1P38-201ENST00000490557 FAM24AA6NFZ4 105 aa2.14□□□□□ -2.07
HMGB1P38-201ENST00000490557 OOSP1A8MZH6 123 aa2.14□□□□□ -2.07
HMGB1P38-201ENST00000490557 NDUFB6O95139 128 aa2.14□□□□□ -2.07
HMGB1P38-201ENST00000490557 FOXI2Q6ZQN5 318 aa2.14□□□□□ -2.07
HMGB1P38-201ENST00000490557 Q6ZS92 163 aa2.14□□□□□ -2.07
HMGB1P38-201ENST00000490557 SLC25A26Q70HW3 274 aa2.14□□□□□ -2.07
HMGB1P38-201ENST00000490557 CLECL1Q8IZS7 167 aa2.14□□□□□ -2.07
HMGB1P38-201ENST00000490557 ZNF431Q8TF32 576 aaPredicted RBP2.14□□□□□ -2.07
HMGB1P38-201ENST00000490557 PRO2289Q9P1D8 64 aa2.14□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 615.1 ms