RNA–Protein interactions for RNA: ENST00000490398.5

COL9A3-214, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 4

Gene COL9A3, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-214ENST00000490398 FAM231CP0DMU5 169 aa12.71□□□□□ -0.37
COL9A3-214ENST00000490398 HOXA5P20719 270 aa12.71□□□□□ -0.37
COL9A3-214ENST00000490398 GCHFRP30047 84 aa12.71□□□□□ -0.37
COL9A3-214ENST00000490398 SERF2P84101 59 aa12.71□□□□□ -0.37
COL9A3-214ENST00000490398 GOLT1AQ6ZVE7 132 aa12.71□□□□□ -0.37
COL9A3-214ENST00000490398 OR11H4Q8NGC9 324 aa12.71□□□□□ -0.37
COL9A3-214ENST00000490398 RXFP4Q8TDU9 374 aa12.71□□□□□ -0.37
COL9A3-214ENST00000490398 TVP23CQ96ET8 276 aa12.71□□□□□ -0.37
COL9A3-214ENST00000490398 DAZ2Q13117 558 aaKnown RBP12.7□□□□□ -0.38
COL9A3-214ENST00000490398 ANXA2RQ3ZCQ2 193 aa12.7□□□□□ -0.38
COL9A3-214ENST00000490398 MUC21Q5SSG8 566 aa12.7□□□□□ -0.38
COL9A3-214ENST00000490398 SGK494Q96LW2 274 aa12.7□□□□□ -0.38
COL9A3-214ENST00000490398 IGHV1OR15-1A0A075B7D0 117 aa12.69□□□□□ -0.38
COL9A3-214ENST00000490398 BORCS7-ASMTA0A0B4J1R7 106 aa12.69□□□□□ -0.38
COL9A3-214ENST00000490398 CMTM2Q8TAZ6 248 aa12.69□□□□□ -0.38
COL9A3-214ENST00000490398 ACTR3CQ9C0K3 210 aaPredicted RBP12.69□□□□□ -0.38
COL9A3-214ENST00000490398 HERC2O95714 4834 aa12.68□□□□□ -0.38
COL9A3-214ENST00000490398 TRBV7-9A0A0J9YWB2 115 aa12.68□□□□□ -0.38
COL9A3-214ENST00000490398 GGTLC3B5MD39 225 aa12.68□□□□□ -0.38
COL9A3-214ENST00000490398 MBP02144 154 aa12.68□□□□□ -0.38
COL9A3-214ENST00000490398 GNPNAT1Q96EK6 184 aaPredicted RBP12.68□□□□□ -0.38
COL9A3-214ENST00000490398 TMPRSS5Q9H3S3 457 aa12.68□□□□□ -0.38
COL9A3-214ENST00000490398 M0R2N4 97 aa12.67□□□□□ -0.38
COL9A3-214ENST00000490398 RGS13O14921 159 aa12.67□□□□□ -0.38
COL9A3-214ENST00000490398 NUDT3O95989 172 aa12.67□□□□□ -0.38
COL9A3-214ENST00000490398 ZNF680Q8NEM1 530 aa12.67□□□□□ -0.38
COL9A3-214ENST00000490398 ST6GAL2Q96JF0 529 aa12.67□□□□□ -0.38
COL9A3-214ENST00000490398 IGLV2-18A0A075B6J9 118 aa12.66□□□□□ -0.38
COL9A3-214ENST00000490398 TRGV1A0A0A0MS02 117 aa12.66□□□□□ -0.38
COL9A3-214ENST00000490398 F6UZH7 168 aa12.66□□□□□ -0.38
COL9A3-214ENST00000490398 SPINK4O60575 86 aa12.66□□□□□ -0.38
COL9A3-214ENST00000490398 FGF8P55075 233 aaPredicted RBP12.66□□□□□ -0.38
COL9A3-214ENST00000490398 TCL1AP56279 114 aa12.66□□□□□ -0.38
COL9A3-214ENST00000490398 OR5I1Q13606 314 aa12.66□□□□□ -0.38
COL9A3-214ENST00000490398 FAM74A1Q5RGS3 127 aa12.66□□□□□ -0.38
COL9A3-214ENST00000490398 Q6AWC8 147 aa12.66□□□□□ -0.38
COL9A3-214ENST00000490398 UBE2DNLQ8IWF7 75 aa12.66□□□□□ -0.38
COL9A3-214ENST00000490398 MDFICQ9P1T7 246 aa12.66□□□□□ -0.38
COL9A3-214ENST00000490398 TRAV26-1A0A087WT03 109 aa12.65□□□□□ -0.38
COL9A3-214ENST00000490398 A0A0J9YY99 117 aa12.65□□□□□ -0.38
COL9A3-214ENST00000490398 CXorf1O96002 111 aa12.65□□□□□ -0.38
COL9A3-214ENST00000490398 TCRAP04437 139 aa12.65□□□□□ -0.38
COL9A3-214ENST00000490398 SUMO1P63165 101 aaKnown RBP12.65□□□□□ -0.38
COL9A3-214ENST00000490398 IQCF2Q8IXL9 164 aa12.65□□□□□ -0.38
COL9A3-214ENST00000490398 KCNRGQ8N5I3 272 aa12.65□□□□□ -0.38
COL9A3-214ENST00000490398 C15orf53Q8NAA6 179 aa12.65□□□□□ -0.38
COL9A3-214ENST00000490398 TMED6Q8WW62 240 aa12.65□□□□□ -0.38
COL9A3-214ENST00000490398 MRPL16Q9NX20 251 aaKnown RBP12.65□□□□□ -0.38
COL9A3-214ENST00000490398 LENEPQ9Y5L5 61 aa12.65□□□□□ -0.38
COL9A3-214ENST00000490398 CTXND1A0A1B0GTU2 59 aa12.64□□□□□ -0.39
COL9A3-214ENST00000490398 IBA57Q5T440 356 aaKnown RBP12.64□□□□□ -0.39
COL9A3-214ENST00000490398 ARL6IP6Q8N6S5 226 aa12.64□□□□□ -0.39
COL9A3-214ENST00000490398 TMEM167BQ9NRX6 74 aa12.64□□□□□ -0.39
COL9A3-214ENST00000490398 TAAR5O14804 337 aa12.63□□□□□ -0.39
COL9A3-214ENST00000490398 IGLV2-11P01706 119 aa12.63□□□□□ -0.39
COL9A3-214ENST00000490398 FHITP49789 147 aa12.63□□□□□ -0.39
COL9A3-214ENST00000490398 ZNF80P51504 273 aaPredicted RBP12.63□□□□□ -0.39
COL9A3-214ENST00000490398 RNF212Q495C1 297 aa12.63□□□□□ -0.39
COL9A3-214ENST00000490398 C5orf17Q8NAS9 161 aa12.63□□□□□ -0.39
COL9A3-214ENST00000490398 C8orf49Q96NF6 230 aa12.63□□□□□ -0.39
COL9A3-214ENST00000490398 ARPC5LQ9BPX5 153 aa12.63□□□□□ -0.39
COL9A3-214ENST00000490398 TREM1Q9NP99 234 aa12.63□□□□□ -0.39
COL9A3-214ENST00000490398 EPDR1Q9UM22 224 aa12.63□□□□□ -0.39
COL9A3-214ENST00000490398 DNAH5Q8TE73 4624 aa12.63□□□□□ -0.39
COL9A3-214ENST00000490398 TRGV2A0A075B6R0 118 aa12.62□□□□□ -0.39
COL9A3-214ENST00000490398 GNRH2O43555 120 aa12.62□□□□□ -0.39
COL9A3-214ENST00000490398 UBE2G2P60604 165 aa12.62□□□□□ -0.39
COL9A3-214ENST00000490398 TMEM183BQ1AE95 376 aa12.62□□□□□ -0.39
COL9A3-214ENST00000490398 AKR1C8PQ5T2L2 129 aa12.62□□□□□ -0.39
COL9A3-214ENST00000490398 TMEM183AQ8IXX5 376 aa12.62□□□□□ -0.39
COL9A3-214ENST00000490398 LINC00479Q96M42 142 aa12.62□□□□□ -0.39
COL9A3-214ENST00000490398 NAGKQ9UJ70 344 aa12.62□□□□□ -0.39
COL9A3-214ENST00000490398 KIAA1109Q2LD37 5005 aa12.62□□□□□ -0.39
COL9A3-214ENST00000490398 HMSDA8MTL9 139 aa12.61□□□□□ -0.39
COL9A3-214ENST00000490398 IGHV3-53P01767 116 aa12.61□□□□□ -0.39
COL9A3-214ENST00000490398 VSIG2Q96IQ7 327 aa12.61□□□□□ -0.39
COL9A3-214ENST00000490398 C18orf15Q96N68 181 aa12.61□□□□□ -0.39
COL9A3-214ENST00000490398 C11orf21Q9P2W6 132 aa12.61□□□□□ -0.39
COL9A3-214ENST00000490398 PSG8Q9UQ74 426 aa12.61□□□□□ -0.39
COL9A3-214ENST00000490398 LINC00588Q9Y4M8 146 aa12.61□□□□□ -0.39
COL9A3-214ENST00000490398 NACAE9PAV3 2078 aa12.61□□□□□ -0.39
COL9A3-214ENST00000490398 ZNF415Q09FC8 603 aa12.6□□□□□ -0.39
COL9A3-214ENST00000490398 ZNF345Q14585 488 aa12.6□□□□□ -0.39
COL9A3-214ENST00000490398 Q6ZR54 194 aa12.6□□□□□ -0.39
COL9A3-214ENST00000490398 LRP1BQ9NZR2 4599 aa12.6□□□□□ -0.39
COL9A3-214ENST00000490398 TRAV34A0A0B4J273 112 aa12.59□□□□□ -0.39
COL9A3-214ENST00000490398 A0A1W2PRE2 83 aa12.59□□□□□ -0.39
COL9A3-214ENST00000490398 MAP1LC3B2A6NCE7 125 aa12.59□□□□□ -0.39
COL9A3-214ENST00000490398 RTL8CO15255 209 aa12.59□□□□□ -0.39
COL9A3-214ENST00000490398 FAM159AQ6UWV7 190 aa12.59□□□□□ -0.39
COL9A3-214ENST00000490398 PRNTQ86SH4 94 aa12.59□□□□□ -0.39
COL9A3-214ENST00000490398 ZNRF2Q8NHG8 242 aa12.59□□□□□ -0.39
COL9A3-214ENST00000490398 MAP1LC3BQ9GZQ8 125 aa12.59□□□□□ -0.39
COL9A3-214ENST00000490398 TRAV21A0A0B4J279 112 aa12.58□□□□□ -0.4
COL9A3-214ENST00000490398 IGHV3-16A0A0C4DH30 117 aa12.58□□□□□ -0.4
COL9A3-214ENST00000490398 FAM74A7A6NL05 159 aa12.58□□□□□ -0.4
COL9A3-214ENST00000490398 TYMSP04818 313 aa12.58□□□□□ -0.4
COL9A3-214ENST00000490398 FLI1Q01543 452 aaPredicted RBP12.58□□□□□ -0.4
COL9A3-214ENST00000490398 LGALS9BQ3B8N2 356 aa12.58□□□□□ -0.4
COL9A3-214ENST00000490398 TDRG1Q3Y452 100 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 713.6 ms