RNA–Protein interactions for RNA: ENST00000490062.1

ERCC3-207, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 4

Gene ERCC3, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-207ENST00000490062 C2CD4CQ8TF44 421 aa12.54□□□□□ -0.4
ERCC3-207ENST00000490062 C11orf52Q96A22 123 aa12.54□□□□□ -0.4
ERCC3-207ENST00000490062 LINC01587Q99440 93 aa12.54□□□□□ -0.4
ERCC3-207ENST00000490062 NDFIP1Q9BT67 221 aa12.54□□□□□ -0.4
ERCC3-207ENST00000490062 GNG13Q9P2W3 67 aa12.54□□□□□ -0.4
ERCC3-207ENST00000490062 IGHV3OR16-12A0A075B7B8 117 aa12.53□□□□□ -0.4
ERCC3-207ENST00000490062 TRAV12-3A0A0B4J271 114 aa12.53□□□□□ -0.4
ERCC3-207ENST00000490062 C11orf94C9JXX5 98 aa12.53□□□□□ -0.4
ERCC3-207ENST00000490062 IFNA1P01562 189 aa12.53□□□□□ -0.4
ERCC3-207ENST00000490062 S100A9P06702 114 aaKnown RBP12.53□□□□□ -0.4
ERCC3-207ENST00000490062 BTN1A1Q13410 526 aa12.53□□□□□ -0.4
ERCC3-207ENST00000490062 FMC1Q96HJ9 113 aa12.53□□□□□ -0.4
ERCC3-207ENST00000490062 TREM1Q9NP99 234 aa12.53□□□□□ -0.4
ERCC3-207ENST00000490062 TEX48A0A1B0GUV7 120 aa12.52□□□□□ -0.41
ERCC3-207ENST00000490062 LOC102723971A0A1B0GUV8 181 aa12.52□□□□□ -0.41
ERCC3-207ENST00000490062 NDUFS6O75380 124 aaKnown RBP12.52□□□□□ -0.41
ERCC3-207ENST00000490062 BCL2P10415 239 aa12.52□□□□□ -0.41
ERCC3-207ENST00000490062 TMEM183BQ1AE95 376 aa12.52□□□□□ -0.41
ERCC3-207ENST00000490062 ANXA2RQ3ZCQ2 193 aa12.52□□□□□ -0.41
ERCC3-207ENST00000490062 ZNF680Q8NEM1 530 aa12.52□□□□□ -0.41
ERCC3-207ENST00000490062 MUC7Q8TAX7 377 aa12.52□□□□□ -0.41
ERCC3-207ENST00000490062 RNASE8Q8TDE3 154 aaKnown RBP12.52□□□□□ -0.41
ERCC3-207ENST00000490062 TMEM263Q8WUH6 116 aaKnown RBP12.52□□□□□ -0.41
ERCC3-207ENST00000490062 LINC00479Q96M42 142 aa12.52□□□□□ -0.41
ERCC3-207ENST00000490062 ZFP30Q9Y2G7 519 aa12.52□□□□□ -0.41
ERCC3-207ENST00000490062 PLAC8L1A1L4L8 177 aa12.51□□□□□ -0.41
ERCC3-207ENST00000490062 RNASE4P34096 147 aaKnown RBP12.51□□□□□ -0.41
ERCC3-207ENST00000490062 MEF2BQ02080 365 aaPredicted RBP12.51□□□□□ -0.41
ERCC3-207ENST00000490062 Q86TA4 180 aa12.51□□□□□ -0.41
ERCC3-207ENST00000490062 C16orf74Q96GX8 76 aa12.51□□□□□ -0.41
ERCC3-207ENST00000490062 VAX2Q9UIW0 290 aa12.51□□□□□ -0.41
ERCC3-207ENST00000490062 ZNF705GA8MUZ8 300 aaPredicted RBP12.5□□□□□ -0.41
ERCC3-207ENST00000490062 C3orf84H3BNL1 204 aa12.5□□□□□ -0.41
ERCC3-207ENST00000490062 J3KRW8 73 aa12.5□□□□□ -0.41
ERCC3-207ENST00000490062 TDRG1Q3Y452 100 aa12.5□□□□□ -0.41
ERCC3-207ENST00000490062 SGK494Q96LW2 274 aa12.5□□□□□ -0.41
ERCC3-207ENST00000490062 TRAV34A0A0B4J273 112 aa12.49□□□□□ -0.41
ERCC3-207ENST00000490062 TRAV21A0A0B4J279 112 aa12.49□□□□□ -0.41
ERCC3-207ENST00000490062 SCO2A0A1W2PP80 73 aa12.49□□□□□ -0.41
ERCC3-207ENST00000490062 DEFB4AO15263 64 aa12.49□□□□□ -0.41
ERCC3-207ENST00000490062 PDE6DO43924 150 aa12.49□□□□□ -0.41
ERCC3-207ENST00000490062 LTAP01374 205 aa12.49□□□□□ -0.41
ERCC3-207ENST00000490062 AZU1P20160 251 aa12.49□□□□□ -0.41
ERCC3-207ENST00000490062 AKR1C3P42330 323 aa12.49□□□□□ -0.41
ERCC3-207ENST00000490062 SMUG1Q53HV7 270 aa12.49□□□□□ -0.41
ERCC3-207ENST00000490062 PRNTQ86SH4 94 aa12.49□□□□□ -0.41
ERCC3-207ENST00000490062 EIF4E3Q8N5X7 224 aaKnown RBP12.49□□□□□ -0.41
ERCC3-207ENST00000490062 C11orf45Q8TAV5 145 aa12.49□□□□□ -0.41
ERCC3-207ENST00000490062 DKK2Q9UBU2 259 aa12.49□□□□□ -0.41
ERCC3-207ENST00000490062 TP53TG3Q9ULZ0 132 aa12.49□□□□□ -0.41
ERCC3-207ENST00000490062 IGHV1OR15-1A0A075B7D0 117 aa12.48□□□□□ -0.41
ERCC3-207ENST00000490062 UBE2G1P62253 170 aa12.48□□□□□ -0.41
ERCC3-207ENST00000490062 IBA57Q5T440 356 aaKnown RBP12.48□□□□□ -0.41
ERCC3-207ENST00000490062 LYRM9A8MSI8 78 aa12.47□□□□□ -0.41
ERCC3-207ENST00000490062 PFN1P07737 140 aaKnown RBP12.47□□□□□ -0.41
ERCC3-207ENST00000490062 SPART-AS1P0CW21 52 aa12.47□□□□□ -0.41
ERCC3-207ENST00000490062 Q6ZQT7 251 aa12.47□□□□□ -0.41
ERCC3-207ENST00000490062 C11orf72Q8NBR9 251 aa12.47□□□□□ -0.41
ERCC3-207ENST00000490062 C8orf49Q96NF6 230 aa12.47□□□□□ -0.41
ERCC3-207ENST00000490062 MLST8Q9BVC4 326 aa12.47□□□□□ -0.41
ERCC3-207ENST00000490062 CXorf65A6NEN9 183 aa12.46□□□□□ -0.41
ERCC3-207ENST00000490062 RGS13O14921 159 aa12.46□□□□□ -0.41
ERCC3-207ENST00000490062 GCGP01275 180 aa12.46□□□□□ -0.41
ERCC3-207ENST00000490062 PRM2P04554 102 aa12.46□□□□□ -0.41
ERCC3-207ENST00000490062 ZNF80P51504 273 aaPredicted RBP12.46□□□□□ -0.41
ERCC3-207ENST00000490062 DAZ2Q13117 558 aaKnown RBP12.46□□□□□ -0.41
ERCC3-207ENST00000490062 ZNF506Q5JVG8 444 aa12.46□□□□□ -0.41
ERCC3-207ENST00000490062 TMEM183AQ8IXX5 376 aa12.46□□□□□ -0.41
ERCC3-207ENST00000490062 CELA1Q9UNI1 258 aa12.46□□□□□ -0.41
ERCC3-207ENST00000490062 TIMM8BQ9Y5J9 83 aaPredicted RBP12.46□□□□□ -0.41
ERCC3-207ENST00000490062 RBFOX3A6NFN3 312 aa12.45□□□□□ -0.42
ERCC3-207ENST00000490062 FAM222AQ5U5X8 452 aa12.45□□□□□ -0.42
ERCC3-207ENST00000490062 LINC00612Q8N6U2 182 aa12.45□□□□□ -0.42
ERCC3-207ENST00000490062 SMIM12Q96EX1 92 aa12.45□□□□□ -0.42
ERCC3-207ENST00000490062 STARD9Q9P2P6 4700 aa12.45□□□□□ -0.42
ERCC3-207ENST00000490062 TMEM250H0YL14 139 aa12.44□□□□□ -0.42
ERCC3-207ENST00000490062 RPL35P42766 123 aaKnown RBP12.44□□□□□ -0.42
ERCC3-207ENST00000490062 TCL1AP56279 114 aa12.44□□□□□ -0.42
ERCC3-207ENST00000490062 C12orf74Q32Q52 190 aa12.44□□□□□ -0.42
ERCC3-207ENST00000490062 FAM159AQ6UWV7 190 aa12.44□□□□□ -0.42
ERCC3-207ENST00000490062 KCNS1Q96KK3 526 aa12.44□□□□□ -0.42
ERCC3-207ENST00000490062 FAM210AQ96ND0 272 aa12.44□□□□□ -0.42
ERCC3-207ENST00000490062 CBY3A6NI87 242 aa12.43□□□□□ -0.42
ERCC3-207ENST00000490062 FABP5P3A8MUU1 101 aa12.43□□□□□ -0.42
ERCC3-207ENST00000490062 HTN1P15515 57 aa12.43□□□□□ -0.42
ERCC3-207ENST00000490062 NANOS2P60321 138 aaKnown RBP12.43□□□□□ -0.42
ERCC3-207ENST00000490062 ZNF674Q2M3X9 581 aa12.43□□□□□ -0.42
ERCC3-207ENST00000490062 ZC2HC1AQ96GY0 325 aa12.43□□□□□ -0.42
ERCC3-207ENST00000490062 CSMD3Q7Z407 3707 aa12.42□□□□□ -0.42
ERCC3-207ENST00000490062 TRGV11A0A075B6L2 103 aa12.42□□□□□ -0.42
ERCC3-207ENST00000490062 CRIP1P50238 77 aa12.42□□□□□ -0.42
ERCC3-207ENST00000490062 EMP1P54849 157 aa12.42□□□□□ -0.42
ERCC3-207ENST00000490062 CASC10Q5T4H9 136 aa12.42□□□□□ -0.42
ERCC3-207ENST00000490062 BAGE2Q86Y30 109 aa12.42□□□□□ -0.42
ERCC3-207ENST00000490062 C18orf15Q96N68 181 aa12.42□□□□□ -0.42
ERCC3-207ENST00000490062 C11orf21Q9P2W6 132 aa12.42□□□□□ -0.42
ERCC3-207ENST00000490062 NUPR2A6NF83 97 aa12.41□□□□□ -0.42
ERCC3-207ENST00000490062 SNURFLB1AK76 121 aa12.41□□□□□ -0.42
ERCC3-207ENST00000490062 ZNF767PQ75MW2 155 aa12.41□□□□□ -0.42
ERCC3-207ENST00000490062 DERL1Q9BUN8 251 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms