RNA–Protein interactions for RNA: ENST00000490032.5

HMGN1-218, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 405 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-218ENST00000490032 H3BVH4 76 aa1.42□□□□□ -2.18
HMGN1-218ENST00000490032 J3QRE1 110 aa1.42□□□□□ -2.18
HMGN1-218ENST00000490032 K7EMI3 77 aa1.42□□□□□ -2.18
HMGN1-218ENST00000490032 LGALS9O00182 355 aa1.42□□□□□ -2.18
HMGN1-218ENST00000490032 ATOX1O00244 68 aa1.42□□□□□ -2.18
HMGN1-218ENST00000490032 PLPP1O14494 284 aa1.42□□□□□ -2.18
HMGN1-218ENST00000490032 NDUFC1O43677 76 aa1.42□□□□□ -2.18
HMGN1-218ENST00000490032 SYNGR2O43760 224 aa1.42□□□□□ -2.18
HMGN1-218ENST00000490032 NAPSAO96009 420 aa1.42□□□□□ -2.18
HMGN1-218ENST00000490032 MGST1P10620 155 aaKnown RBP1.42□□□□□ -2.18
HMGN1-218ENST00000490032 GZMHP20718 246 aa1.42□□□□□ -2.18
HMGN1-218ENST00000490032 CBLN1P23435 193 aa1.42□□□□□ -2.18
HMGN1-218ENST00000490032 PSMB2P49721 201 aa1.42□□□□□ -2.18
HMGN1-218ENST00000490032 FOXA1P55317 472 aa1.42□□□□□ -2.18
HMGN1-218ENST00000490032 CCL23P55773 120 aa1.42□□□□□ -2.18
HMGN1-218ENST00000490032 ATP5EP56381 51 aaPredicted RBP1.42□□□□□ -2.18
HMGN1-218ENST00000490032 ZNF121P58317 390 aaPredicted RBP1.42□□□□□ -2.18
HMGN1-218ENST00000490032 PCBD1P61457 104 aa1.42□□□□□ -2.18
HMGN1-218ENST00000490032 RPL23P62829 140 aaKnown RBP1.42□□□□□ -2.18
HMGN1-218ENST00000490032 RPL30P62888 115 aaKnown RBP1.42□□□□□ -2.18
HMGN1-218ENST00000490032 CCL20P78556 96 aa1.42□□□□□ -2.18
HMGN1-218ENST00000490032 TNFAIP6P98066 277 aaPredicted RBP1.42□□□□□ -2.18
HMGN1-218ENST00000490032 PDGFRLQ15198 375 aa1.42□□□□□ -2.18
HMGN1-218ENST00000490032 TMEM170BQ5T4T1 132 aa1.42□□□□□ -2.18
HMGN1-218ENST00000490032 CEMP1Q6PRD7 247 aaPredicted RBP1.42□□□□□ -2.18
HMGN1-218ENST00000490032 UNQ5815/PRO19632Q6UWF5 114 aa1.42□□□□□ -2.18
HMGN1-218ENST00000490032 Q6ZSR6 202 aa1.42□□□□□ -2.18
HMGN1-218ENST00000490032 GOLT1AQ6ZVE7 132 aa1.42□□□□□ -2.18
HMGN1-218ENST00000490032 RPRMLQ8N4K4 120 aa1.42□□□□□ -2.18
HMGN1-218ENST00000490032 OR1L4Q8NGR5 311 aa1.42□□□□□ -2.18
HMGN1-218ENST00000490032 OR2A1Q8NGT9 310 aa1.42□□□□□ -2.18
HMGN1-218ENST00000490032 ZNF563Q8TA94 476 aa1.42□□□□□ -2.18
HMGN1-218ENST00000490032 PIFOQ8TCI5 191 aa1.42□□□□□ -2.18
HMGN1-218ENST00000490032 SLC37A2Q8TED4 501 aa1.42□□□□□ -2.18
HMGN1-218ENST00000490032 CT55Q8WUE5 264 aa1.42□□□□□ -2.18
HMGN1-218ENST00000490032 LRRC29Q8WV35 223 aa1.42□□□□□ -2.18
HMGN1-218ENST00000490032 FGF13Q92913 245 aa1.42□□□□□ -2.18
HMGN1-218ENST00000490032 SPTSSAQ969W0 71 aa1.42□□□□□ -2.18
HMGN1-218ENST00000490032 RPEQ96AT9 228 aa1.42□□□□□ -2.18
HMGN1-218ENST00000490032 ZNF707Q96C28 371 aaPredicted RBP1.42□□□□□ -2.18
HMGN1-218ENST00000490032 COQ2Q96H96 371 aa1.42□□□□□ -2.18
HMGN1-218ENST00000490032 YPEL4Q96NS1 127 aa1.42□□□□□ -2.18
HMGN1-218ENST00000490032 YPEL2Q96QA6 119 aa1.42□□□□□ -2.18
HMGN1-218ENST00000490032 OR8B2Q96RD0 313 aa1.42□□□□□ -2.18
HMGN1-218ENST00000490032 CAMK2N2Q96S95 79 aa1.42□□□□□ -2.18
HMGN1-218ENST00000490032 WFDC6Q9BQY6 131 aa1.42□□□□□ -2.18
HMGN1-218ENST00000490032 PARP12Q9H0J9 701 aaKnown RBP1.42□□□□□ -2.18
HMGN1-218ENST00000490032 CXCL16Q9H2A7 254 aa1.42□□□□□ -2.18
HMGN1-218ENST00000490032 PRORYQ9H606 182 aa1.42□□□□□ -2.18
HMGN1-218ENST00000490032 EDA2RQ9HAV5 297 aa1.42□□□□□ -2.18
HMGN1-218ENST00000490032 TAAR3PQ9P1P4 343 aa1.42□□□□□ -2.18
HMGN1-218ENST00000490032 SS18L2Q9UHA2 77 aa1.42□□□□□ -2.18
HMGN1-218ENST00000490032 PRNDQ9UKY0 176 aa1.42□□□□□ -2.18
HMGN1-218ENST00000490032 KLF13Q9Y2Y9 288 aaPredicted RBP1.42□□□□□ -2.18
HMGN1-218ENST00000490032 Q9Y3F1 56 aa1.42□□□□□ -2.18
HMGN1-218ENST00000490032 FAM208BQ5VWN6 2430 aa1.42□□□□□ -2.18
HMGN1-218ENST00000490032 COL11A1P12107 1806 aaPredicted RBP1.42□□□□□ -2.18
HMGN1-218ENST00000490032 ANAPC1Q9H1A4 1944 aa1.42□□□□□ -2.18
HMGN1-218ENST00000490032 ZNF106Q9H2Y7 1883 aaKnown RBP1.41□□□□□ -2.18
HMGN1-218ENST00000490032 NYNRINQ9P2P1 1898 aaKnown RBP1.41□□□□□ -2.18
HMGN1-218ENST00000490032 KMT2BQ9UMN6 2715 aaPredicted RBP1.41□□□□□ -2.18
HMGN1-218ENST00000490032 VCANP13611 3396 aa1.41□□□□□ -2.18
HMGN1-218ENST00000490032 TECTAO75443 2155 aa1.41□□□□□ -2.18
HMGN1-218ENST00000490032 A0A0G2JMZ2 1700 aa1.41□□□□□ -2.18
HMGN1-218ENST00000490032 PLXNB2O15031 1838 aa1.41□□□□□ -2.18
HMGN1-218ENST00000490032 ZNF236Q9UL36 1845 aa1.41□□□□□ -2.18
HMGN1-218ENST00000490032 TMED7-TICAM2A0A0A6YYA0 188 aa1.41□□□□□ -2.18
HMGN1-218ENST00000490032 TRAV13-1A0A0B4J241 112 aa1.41□□□□□ -2.18
HMGN1-218ENST00000490032 MUC21A0A0G2JKD1 596 aa1.41□□□□□ -2.18
HMGN1-218ENST00000490032 LOC107984156A0A0G2JMH3 177 aa1.41□□□□□ -2.18
HMGN1-218ENST00000490032 A0A0U1RQV1 116 aa1.41□□□□□ -2.18
HMGN1-218ENST00000490032 MUC21A0A140T8X8 626 aa1.41□□□□□ -2.18
HMGN1-218ENST00000490032 A0A1B0GWA3 101 aa1.41□□□□□ -2.18
HMGN1-218ENST00000490032 C5orf67F2Z3F1 127 aa1.41□□□□□ -2.18
HMGN1-218ENST00000490032 H3BQ85 93 aa1.41□□□□□ -2.18
HMGN1-218ENST00000490032 H7C1H1 209 aa1.41□□□□□ -2.18
HMGN1-218ENST00000490032 HMGN4O00479 90 aa1.41□□□□□ -2.18
HMGN1-218ENST00000490032 TAX1BP3O14907 124 aa1.41□□□□□ -2.18
HMGN1-218ENST00000490032 UBE2L6O14933 153 aa1.41□□□□□ -2.18
HMGN1-218ENST00000490032 NPFFO15130 113 aa1.41□□□□□ -2.18
HMGN1-218ENST00000490032 NDUFB3O43676 98 aa1.41□□□□□ -2.18
HMGN1-218ENST00000490032 BCE1O60756 84 aa1.41□□□□□ -2.18
HMGN1-218ENST00000490032 PDCD6O75340 191 aa1.41□□□□□ -2.18
HMGN1-218ENST00000490032 NPYP01303 97 aa1.41□□□□□ -2.18
HMGN1-218ENST00000490032 RBP4P02753 201 aa1.41□□□□□ -2.18
HMGN1-218ENST00000490032 HMGN2P05204 90 aaKnown RBP1.41□□□□□ -2.18
HMGN1-218ENST00000490032 C3orf79P0CE67 100 aa1.41□□□□□ -2.18
HMGN1-218ENST00000490032 INAFM2P0DMQ5 153 aa1.41□□□□□ -2.18
HMGN1-218ENST00000490032 HLA-DRB4P13762 266 aa1.41□□□□□ -2.18
HMGN1-218ENST00000490032 ZNF708P17019 499 aa1.41□□□□□ -2.18
HMGN1-218ENST00000490032 PLNP26678 52 aa1.41□□□□□ -2.18
HMGN1-218ENST00000490032 CNTFRP26992 372 aa1.41□□□□□ -2.18
HMGN1-218ENST00000490032 PEBP1P30086 187 aaKnown RBP1.41□□□□□ -2.18
HMGN1-218ENST00000490032 FCER1GP30273 86 aa1.41□□□□□ -2.18
HMGN1-218ENST00000490032 CKS2P33552 79 aa1.41□□□□□ -2.18
HMGN1-218ENST00000490032 GLRXP35754 106 aa1.41□□□□□ -2.18
HMGN1-218ENST00000490032 MPV17P39210 176 aa1.41□□□□□ -2.18
HMGN1-218ENST00000490032 SSR2P43308 183 aa1.41□□□□□ -2.18
HMGN1-218ENST00000490032 CXCL12P48061 93 aa1.41□□□□□ -2.18
HMGN1-218ENST00000490032 DYNLT3P51808 116 aa1.41□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms