RNA–Protein interactions for RNA: ENST00000489378.5

SSBP1-212, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 1,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-212ENST00000489378 C7orf71A4D174 169 aa5.92□□□□□ -1.46
SSBP1-212ENST00000489378 H3BTX0 84 aa5.92□□□□□ -1.46
SSBP1-212ENST00000489378 S100A7P31151 101 aa5.92□□□□□ -1.46
SSBP1-212ENST00000489378 PPT1P50897 306 aa5.92□□□□□ -1.46
SSBP1-212ENST00000489378 CD300CQ08708 224 aa5.92□□□□□ -1.46
SSBP1-212ENST00000489378 BTN1A1Q13410 526 aa5.92□□□□□ -1.46
SSBP1-212ENST00000489378 LAGE3Q14657 143 aa5.92□□□□□ -1.46
SSBP1-212ENST00000489378 ZNF846Q147U1 533 aa5.92□□□□□ -1.46
SSBP1-212ENST00000489378 CLVS1Q8IUQ0 354 aaPredicted RBP5.92□□□□□ -1.46
SSBP1-212ENST00000489378 ZFAND1Q8TCF1 268 aa5.92□□□□□ -1.46
SSBP1-212ENST00000489378 MARCH1Q8TCQ1 289 aa5.92□□□□□ -1.46
SSBP1-212ENST00000489378 NUDT11Q96G61 164 aa5.92□□□□□ -1.46
SSBP1-212ENST00000489378 ODF3Q96PU9 254 aa5.92□□□□□ -1.46
SSBP1-212ENST00000489378 SLC25A31Q9H0C2 315 aa5.92□□□□□ -1.46
SSBP1-212ENST00000489378 NAA60Q9H7X0 242 aa5.92□□□□□ -1.46
SSBP1-212ENST00000489378 PAIP2BQ9ULR5 123 aaKnown RBP5.92□□□□□ -1.46
SSBP1-212ENST00000489378 GPR132Q9UNW8 380 aa5.92□□□□□ -1.46
SSBP1-212ENST00000489378 TRAV8-6A0A0B4J262 113 aa5.91□□□□□ -1.46
SSBP1-212ENST00000489378 CRYM-AS1A6NIL9 109 aa5.91□□□□□ -1.46
SSBP1-212ENST00000489378 C9JCJ5 164 aa5.91□□□□□ -1.46
SSBP1-212ENST00000489378 SLC17A3O00476 420 aa5.91□□□□□ -1.46
SSBP1-212ENST00000489378 HYPMO75409 117 aa5.91□□□□□ -1.46
SSBP1-212ENST00000489378 SLC25A5P05141 298 aaKnown RBP5.91□□□□□ -1.46
SSBP1-212ENST00000489378 OR5G3P0C626 314 aa5.91□□□□□ -1.46
SSBP1-212ENST00000489378 RAB14P61106 215 aa5.91□□□□□ -1.46
SSBP1-212ENST00000489378 RAP2BP61225 183 aa5.91□□□□□ -1.46
SSBP1-212ENST00000489378 RNASE10Q5GAN6 216 aaKnown RBP5.91□□□□□ -1.46
SSBP1-212ENST00000489378 OR10J3Q5JRS4 329 aa5.91□□□□□ -1.46
SSBP1-212ENST00000489378 IBA57Q5T440 356 aaKnown RBP5.91□□□□□ -1.46
SSBP1-212ENST00000489378 Q6ZQT7 251 aa5.91□□□□□ -1.46
SSBP1-212ENST00000489378 OR4D10Q8NGI6 311 aa5.91□□□□□ -1.46
SSBP1-212ENST00000489378 RTBDNQ9BSG5 229 aaPredicted RBP5.91□□□□□ -1.46
SSBP1-212ENST00000489378 CACFD1Q9UGQ2 172 aa5.91□□□□□ -1.46
SSBP1-212ENST00000489378 RNF222A6NCQ9 220 aa5.91□□□□□ -1.46
SSBP1-212ENST00000489378 PRSS46E5RG02 174 aa5.91□□□□□ -1.46
SSBP1-212ENST00000489378 CD3DP04234 171 aa5.91□□□□□ -1.46
SSBP1-212ENST00000489378 HOXB5P09067 269 aa5.91□□□□□ -1.46
SSBP1-212ENST00000489378 IAPPP10997 89 aa5.91□□□□□ -1.46
SSBP1-212ENST00000489378 CXCL2P19875 107 aa5.91□□□□□ -1.46
SSBP1-212ENST00000489378 ANXA7P20073 488 aaKnown RBP5.91□□□□□ -1.46
SSBP1-212ENST00000489378 SMCO1Q147U7 214 aa5.91□□□□□ -1.46
SSBP1-212ENST00000489378 LBHQ53QV2 105 aaPredicted RBP5.91□□□□□ -1.46
SSBP1-212ENST00000489378 LCN15Q6UWW0 184 aa5.91□□□□□ -1.46
SSBP1-212ENST00000489378 ACOT7LQ6ZUV0 252 aa5.91□□□□□ -1.46
SSBP1-212ENST00000489378 ERASQ7Z444 233 aa5.91□□□□□ -1.46
SSBP1-212ENST00000489378 Q8N976 141 aa5.91□□□□□ -1.46
SSBP1-212ENST00000489378 TERB2Q8NHR7 220 aa5.91□□□□□ -1.46
SSBP1-212ENST00000489378 SLC50A1Q9BRV3 221 aa5.91□□□□□ -1.46
SSBP1-212ENST00000489378 GEMIN7Q9H840 131 aaKnown RBP5.91□□□□□ -1.46
SSBP1-212ENST00000489378 RPH3ALQ9UNE2 315 aa5.91□□□□□ -1.46
SSBP1-212ENST00000489378 KLLNB2CW77 178 aa5.9□□□□□ -1.47
SSBP1-212ENST00000489378 RNASE4P34096 147 aaKnown RBP5.9□□□□□ -1.47
SSBP1-212ENST00000489378 RPS19P39019 145 aaKnown RBP5.9□□□□□ -1.47
SSBP1-212ENST00000489378 CCR6P51684 374 aa5.9□□□□□ -1.47
SSBP1-212ENST00000489378 PTTG1IPP53801 180 aa5.9□□□□□ -1.47
SSBP1-212ENST00000489378 TMBIM6P55061 237 aa5.9□□□□□ -1.47
SSBP1-212ENST00000489378 RAB11AP62491 216 aa5.9□□□□□ -1.47
SSBP1-212ENST00000489378 AKR1C1Q04828 323 aa5.9□□□□□ -1.47
SSBP1-212ENST00000489378 ERCC8Q13216 396 aa5.9□□□□□ -1.47
SSBP1-212ENST00000489378 CNPY1Q3B7I2 92 aa5.9□□□□□ -1.47
SSBP1-212ENST00000489378 SCGB2B2Q4G0G5 96 aa5.9□□□□□ -1.47
SSBP1-212ENST00000489378 PATE2Q6UY27 113 aa5.9□□□□□ -1.47
SSBP1-212ENST00000489378 CYP2G1PQ6ZSU1 146 aa5.9□□□□□ -1.47
SSBP1-212ENST00000489378 NUDT10Q8NFP7 164 aa5.9□□□□□ -1.47
SSBP1-212ENST00000489378 OR10P1Q8NGE3 313 aa5.9□□□□□ -1.47
SSBP1-212ENST00000489378 OR10G4Q8NGN3 311 aa5.9□□□□□ -1.47
SSBP1-212ENST00000489378 DYNC2LI1Q8TCX1 351 aa5.9□□□□□ -1.47
SSBP1-212ENST00000489378 TRAV8-3A0A0A6YYJ7 113 aa5.89□□□□□ -1.47
SSBP1-212ENST00000489378 SMIM31A0A1B0GVY4 71 aa5.89□□□□□ -1.47
SSBP1-212ENST00000489378 MPDU1O75352 247 aa5.89□□□□□ -1.47
SSBP1-212ENST00000489378 IL5P05113 134 aa5.89□□□□□ -1.47
SSBP1-212ENST00000489378 LINC00869P0C866 280 aa5.89□□□□□ -1.47
SSBP1-212ENST00000489378 PLP1P60201 277 aa5.89□□□□□ -1.47
SSBP1-212ENST00000489378 SH2D6Q7Z4S9 175 aa5.89□□□□□ -1.47
SSBP1-212ENST00000489378 FAM19A4Q96LR4 140 aa5.89□□□□□ -1.47
SSBP1-212ENST00000489378 LINC01600Q96MT4 127 aa5.89□□□□□ -1.47
SSBP1-212ENST00000489378 SLIRPQ9GZT3 109 aaKnown RBP5.89□□□□□ -1.47
SSBP1-212ENST00000489378 DPH3P1Q9H4G8 78 aa5.89□□□□□ -1.47
SSBP1-212ENST00000489378 VCX3AQ9NNX9 186 aa5.89□□□□□ -1.47
SSBP1-212ENST00000489378 RSL24D1Q9UHA3 163 aaKnown RBP5.89□□□□□ -1.47
SSBP1-212ENST00000489378 IGHV1OR15-1A0A075B7D0 117 aa5.88□□□□□ -1.47
SSBP1-212ENST00000489378 PANO1I0J062 215 aa5.88□□□□□ -1.47
SSBP1-212ENST00000489378 PRR9Q5T870 116 aa5.88□□□□□ -1.47
SSBP1-212ENST00000489378 LYZL2Q7Z4W2 148 aa5.88□□□□□ -1.47
SSBP1-212ENST00000489378 ATP6V0E2Q8NHE4 81 aa5.88□□□□□ -1.47
SSBP1-212ENST00000489378 RAB2BQ8WUD1 216 aa5.88□□□□□ -1.47
SSBP1-212ENST00000489378 DNAJC30Q96LL9 226 aa5.88□□□□□ -1.47
SSBP1-212ENST00000489378 C14orf166Q9Y224 244 aaKnown RBP5.88□□□□□ -1.47
SSBP1-212ENST00000489378 FSIP2Q5CZC0 6907 aa5.87□□□□□ -1.47
SSBP1-212ENST00000489378 A0A0U1RRA0 63 aa5.87□□□□□ -1.47
SSBP1-212ENST00000489378 H3BQ15 152 aa5.87□□□□□ -1.47
SSBP1-212ENST00000489378 NDUFS6O75380 124 aaKnown RBP5.87□□□□□ -1.47
SSBP1-212ENST00000489378 OR4E1P0C645 316 aa5.87□□□□□ -1.47
SSBP1-212ENST00000489378 OPCMLQ14982 345 aa5.87□□□□□ -1.47
SSBP1-212ENST00000489378 DAZ4Q86SG3 579 aaKnown RBP5.87□□□□□ -1.47
SSBP1-212ENST00000489378 RASL10AQ92737 203 aa5.87□□□□□ -1.47
SSBP1-212ENST00000489378 ARL6Q9H0F7 186 aa5.87□□□□□ -1.47
SSBP1-212ENST00000489378 ARV1Q9H2C2 271 aa5.87□□□□□ -1.47
SSBP1-212ENST00000489378 MIXL1Q9H2W2 232 aa5.87□□□□□ -1.47
SSBP1-212ENST00000489378 DAZ3Q9NR90 486 aaKnown RBP5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms