RNA–Protein interactions for RNA: ENST00000489352.5

HDAC6-233, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-233ENST00000489352 IGHV3-73A0A0B4J1V6 119 aa7.18□□□□□ -1.26
HDAC6-233ENST00000489352 KRTAP9-7A8MTY7 169 aa7.18□□□□□ -1.26
HDAC6-233ENST00000489352 CCSO14618 274 aa7.18□□□□□ -1.26
HDAC6-233ENST00000489352 ZNF253O75346 499 aa7.18□□□□□ -1.26
HDAC6-233ENST00000489352 HIST1H1EP10412 219 aaKnown RBP7.18□□□□□ -1.26
HDAC6-233ENST00000489352 SNX29P2Q8IUI4 249 aa7.18□□□□□ -1.26
HDAC6-233ENST00000489352 SAMD12Q8N8I0 201 aa7.18□□□□□ -1.26
HDAC6-233ENST00000489352 CYB561D1Q8N8Q1 229 aa7.18□□□□□ -1.26
HDAC6-233ENST00000489352 OR51S1Q8NGJ8 323 aa7.18□□□□□ -1.26
HDAC6-233ENST00000489352 LYPD6BQ8NI32 183 aa7.18□□□□□ -1.26
HDAC6-233ENST00000489352 MRPL53Q96EL3 112 aaKnown RBP7.18□□□□□ -1.26
HDAC6-233ENST00000489352 SAT2Q96F10 170 aaPredicted RBP7.18□□□□□ -1.26
HDAC6-233ENST00000489352 KCNIP3Q9Y2W7 256 aa7.18□□□□□ -1.26
HDAC6-233ENST00000489352 H3BQ15 152 aa7.17□□□□□ -1.26
HDAC6-233ENST00000489352 TMEM127O75204 238 aa7.17□□□□□ -1.26
HDAC6-233ENST00000489352 MED6O75586 246 aa7.17□□□□□ -1.26
HDAC6-233ENST00000489352 PRR9Q5T870 116 aa7.17□□□□□ -1.26
HDAC6-233ENST00000489352 PXDC1Q5TGL8 231 aa7.17□□□□□ -1.26
HDAC6-233ENST00000489352 PATE2Q6UY27 113 aa7.17□□□□□ -1.26
HDAC6-233ENST00000489352 ZFAND2AQ8N6M9 145 aa7.17□□□□□ -1.26
HDAC6-233ENST00000489352 LINC00479Q96M42 142 aa7.17□□□□□ -1.26
HDAC6-233ENST00000489352 CIB3Q96Q77 187 aaPredicted RBP7.17□□□□□ -1.26
HDAC6-233ENST00000489352 ATP5SQ99766 215 aa7.17□□□□□ -1.26
HDAC6-233ENST00000489352 BLOC1S6Q9UL45 172 aa7.17□□□□□ -1.26
HDAC6-233ENST00000489352 GAGE12JA6NER3 117 aa7.16□□□□□ -1.26
HDAC6-233ENST00000489352 M0R3E3 92 aa7.16□□□□□ -1.26
HDAC6-233ENST00000489352 GOSR2O14653 212 aa7.16□□□□□ -1.26
HDAC6-233ENST00000489352 COX7A2P2O60397 106 aa7.16□□□□□ -1.26
HDAC6-233ENST00000489352 IGLC2P0DOY2 106 aa7.16□□□□□ -1.26
HDAC6-233ENST00000489352 GAGE1Q13065 139 aa7.16□□□□□ -1.26
HDAC6-233ENST00000489352 GAGE4Q13068 117 aa7.16□□□□□ -1.26
HDAC6-233ENST00000489352 GAGE5Q13069 117 aa7.16□□□□□ -1.26
HDAC6-233ENST00000489352 GAGE13Q4V321 117 aa7.16□□□□□ -1.26
HDAC6-233ENST00000489352 SPANXN5Q5MJ07 72 aa7.16□□□□□ -1.26
HDAC6-233ENST00000489352 CLRN3Q8NCR9 226 aa7.16□□□□□ -1.26
HDAC6-233ENST00000489352 AP5S1Q9NUS5 200 aa7.16□□□□□ -1.26
HDAC6-233ENST00000489352 NAGKQ9UJ70 344 aa7.16□□□□□ -1.26
HDAC6-233ENST00000489352 PRELID1Q9Y255 219 aa7.16□□□□□ -1.26
HDAC6-233ENST00000489352 CD3DP04234 171 aa7.15□□□□□ -1.26
HDAC6-233ENST00000489352 MGST1P10620 155 aaKnown RBP7.15□□□□□ -1.26
HDAC6-233ENST00000489352 VAMP1P23763 118 aa7.15□□□□□ -1.26
HDAC6-233ENST00000489352 SRSF9Q13242 221 aaKnown RBP eCLIP7.15□□□□□ -1.26
HDAC6-233ENST00000489352 DMRTA1Q5VZB9 504 aa7.15□□□□□ -1.26
HDAC6-233ENST00000489352 ZNF546Q86UE3 836 aa7.15□□□□□ -1.26
HDAC6-233ENST00000489352 CHCHD7Q9BUK0 85 aa7.15□□□□□ -1.26
HDAC6-233ENST00000489352 A0A0B4J2A0 478 aa7.14□□□□□ -1.27
HDAC6-233ENST00000489352 LOC100506127A0A0U1RQW1 187 aa7.14□□□□□ -1.27
HDAC6-233ENST00000489352 hDV102S1A0JD36 115 aa7.14□□□□□ -1.27
HDAC6-233ENST00000489352 PRSS46E5RG02 174 aa7.14□□□□□ -1.27
HDAC6-233ENST00000489352 TMEM262E9PQX1 116 aa7.14□□□□□ -1.27
HDAC6-233ENST00000489352 WRBO00258 174 aa7.14□□□□□ -1.27
HDAC6-233ENST00000489352 INPP1P49441 399 aa7.14□□□□□ -1.27
HDAC6-233ENST00000489352 LINC01547P58512 204 aaPredicted RBP7.14□□□□□ -1.27
HDAC6-233ENST00000489352 SRSF3P84103 164 aaKnown RBP7.14□□□□□ -1.27
HDAC6-233ENST00000489352 MAJINQ3KP22 176 aa7.14□□□□□ -1.27
HDAC6-233ENST00000489352 C10orf113Q5VZT2 155 aa7.14□□□□□ -1.27
HDAC6-233ENST00000489352 LYZL2Q7Z4W2 148 aa7.14□□□□□ -1.27
HDAC6-233ENST00000489352 CROCCP3Q8IVE0 287 aa7.14□□□□□ -1.27
HDAC6-233ENST00000489352 TMEM75Q8N9X5 138 aa7.14□□□□□ -1.27
HDAC6-233ENST00000489352 CHAC2Q8WUX2 184 aa7.14□□□□□ -1.27
HDAC6-233ENST00000489352 AAMDCQ9H7C9 122 aa7.14□□□□□ -1.27
HDAC6-233ENST00000489352 ZNF492Q9P255 531 aa7.14□□□□□ -1.27
HDAC6-233ENST00000489352 SHPKQ9UHJ6 478 aa7.14□□□□□ -1.27
HDAC6-233ENST00000489352 STRAPQ9Y3F4 350 aaKnown RBP7.14□□□□□ -1.27
HDAC6-233ENST00000489352 TIMM9Q9Y5J7 89 aa7.14□□□□□ -1.27
HDAC6-233ENST00000489352 IGKV2-40A0A087WW87 121 aaPredicted RBP7.13□□□□□ -1.27
HDAC6-233ENST00000489352 A0A087WXM4 84 aa7.13□□□□□ -1.27
HDAC6-233ENST00000489352 IGKV2D-40P01614 121 aaPredicted RBP7.13□□□□□ -1.27
HDAC6-233ENST00000489352 TBPP20226 339 aa7.13□□□□□ -1.27
HDAC6-233ENST00000489352 GABARAPL2P60520 117 aa7.13□□□□□ -1.27
HDAC6-233ENST00000489352 SURF2Q15527 256 aaPredicted RBP7.13□□□□□ -1.27
HDAC6-233ENST00000489352 ZNF876PQ49A33 203 aa7.13□□□□□ -1.27
HDAC6-233ENST00000489352 CFAP126Q5VTH2 177 aa7.13□□□□□ -1.27
HDAC6-233ENST00000489352 Q6ZRP5 223 aa7.13□□□□□ -1.27
HDAC6-233ENST00000489352 RTBDNQ9BSG5 229 aaPredicted RBP7.13□□□□□ -1.27
HDAC6-233ENST00000489352 MRPS26Q9BYN8 205 aaKnown RBP7.13□□□□□ -1.27
HDAC6-233ENST00000489352 BATF3Q9NR55 127 aa7.13□□□□□ -1.27
HDAC6-233ENST00000489352 PRR13Q9NZ81 148 aa7.13□□□□□ -1.27
HDAC6-233ENST00000489352 AGPAT2O15120 278 aa7.12□□□□□ -1.27
HDAC6-233ENST00000489352 GNRH2O43555 120 aa7.12□□□□□ -1.27
HDAC6-233ENST00000489352 IFNA7P01567 189 aa7.12□□□□□ -1.27
HDAC6-233ENST00000489352 ZNF138P52744 262 aa7.12□□□□□ -1.27
HDAC6-233ENST00000489352 CNBPP62633 177 aaKnown RBP7.12□□□□□ -1.27
HDAC6-233ENST00000489352 STPG4Q8N801 248 aa7.12□□□□□ -1.27
HDAC6-233ENST00000489352 C15orf54Q8N8G6 183 aa7.12□□□□□ -1.27
HDAC6-233ENST00000489352 RAB2BQ8WUD1 216 aa7.12□□□□□ -1.27
HDAC6-233ENST00000489352 NPVFQ9HCQ7 196 aa7.12□□□□□ -1.27
HDAC6-233ENST00000489352 VCX3AQ9NNX9 186 aa7.12□□□□□ -1.27
HDAC6-233ENST00000489352 PIGBOS1A0A0B4J2F0 54 aa7.11□□□□□ -1.27
HDAC6-233ENST00000489352 H3BP45 60 aa7.11□□□□□ -1.27
HDAC6-233ENST00000489352 SYNGR2O43760 224 aa7.11□□□□□ -1.27
HDAC6-233ENST00000489352 TCRBP04435 133 aa7.11□□□□□ -1.27
HDAC6-233ENST00000489352 FGF8P55075 233 aaPredicted RBP7.11□□□□□ -1.27
HDAC6-233ENST00000489352 RRAS2P62070 204 aaPredicted RBP7.11□□□□□ -1.27
HDAC6-233ENST00000489352 SLC38A11Q08AI6 406 aa7.11□□□□□ -1.27
HDAC6-233ENST00000489352 ENHOQ6UWT2 76 aa7.11□□□□□ -1.27
HDAC6-233ENST00000489352 C20orf85Q9H1P6 137 aa7.11□□□□□ -1.27
HDAC6-233ENST00000489352 TRBV19A0A075B6N1 114 aa7.1□□□□□ -1.27
HDAC6-233ENST00000489352 IGKV2-24A0A0C4DH68 120 aa7.1□□□□□ -1.27
HDAC6-233ENST00000489352 TRBV7-9A0A0J9YWB2 115 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms