RNA–Protein interactions for RNA: ENST00000489108.1

USP48-210, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-210ENST00000489108 ZNF846Q147U1 533 aa10.64□□□□□ -0.71
USP48-210ENST00000489108 OR4C5Q8NGB2 326 aa10.64□□□□□ -0.71
USP48-210ENST00000489108 PYYP10082 97 aa10.63□□□□□ -0.71
USP48-210ENST00000489108 RAB31Q13636 194 aa10.63□□□□□ -0.71
USP48-210ENST00000489108 TMEM183BQ1AE95 376 aa10.63□□□□□ -0.71
USP48-210ENST00000489108 FAM122CQ6P4D5 195 aa10.63□□□□□ -0.71
USP48-210ENST00000489108 TMEM183AQ8IXX5 376 aa10.63□□□□□ -0.71
USP48-210ENST00000489108 TOMM5Q8N4H5 51 aa10.63□□□□□ -0.71
USP48-210ENST00000489108 C12orf45Q8N5I9 185 aaPredicted RBP10.63□□□□□ -0.71
USP48-210ENST00000489108 PFDN5Q99471 154 aa10.63□□□□□ -0.71
USP48-210ENST00000489108 TMEM14CQ9P0S9 112 aa10.63□□□□□ -0.71
USP48-210ENST00000489108 PDE6HQ13956 83 aa10.62□□□□□ -0.71
USP48-210ENST00000489108 TDRG1Q3Y452 100 aa10.62□□□□□ -0.71
USP48-210ENST00000489108 Q8TAT8 98 aa10.62□□□□□ -0.71
USP48-210ENST00000489108 BAALCQ8WXS3 180 aa10.62□□□□□ -0.71
USP48-210ENST00000489108 TRIM63Q969Q1 353 aa10.62□□□□□ -0.71
USP48-210ENST00000489108 AAMDCQ9H7C9 122 aa10.62□□□□□ -0.71
USP48-210ENST00000489108 BOLA1Q9Y3E2 137 aa10.62□□□□□ -0.71
USP48-210ENST00000489108 C7orf66A4D0T2 115 aa10.61□□□□□ -0.71
USP48-210ENST00000489108 PFN1P07737 140 aaKnown RBP10.61□□□□□ -0.71
USP48-210ENST00000489108 GATA1P15976 413 aaPredicted RBP10.61□□□□□ -0.71
USP48-210ENST00000489108 ZNF138P52744 262 aa10.61□□□□□ -0.71
USP48-210ENST00000489108 AP3S2P59780 193 aa10.61□□□□□ -0.71
USP48-210ENST00000489108 LAGE3Q14657 143 aa10.61□□□□□ -0.71
USP48-210ENST00000489108 Q8N3U1 123 aa10.61□□□□□ -0.71
USP48-210ENST00000489108 RNF213Q63HN8 5207 aa10.6□□□□□ -0.71
USP48-210ENST00000489108 RBFOX3A6NFN3 312 aa10.6□□□□□ -0.71
USP48-210ENST00000489108 RS1O15537 224 aa10.6□□□□□ -0.71
USP48-210ENST00000489108 SMIM18P0DKX4 95 aa10.6□□□□□ -0.71
USP48-210ENST00000489108 HNRNPA3P51991 378 aaKnown RBP10.6□□□□□ -0.71
USP48-210ENST00000489108 UBE2MP61081 183 aaKnown RBP10.6□□□□□ -0.71
USP48-210ENST00000489108 ZNF266Q14584 549 aa10.6□□□□□ -0.71
USP48-210ENST00000489108 IAH1Q2TAA2 248 aaPredicted RBP10.6□□□□□ -0.71
USP48-210ENST00000489108 LELP1Q5T871 98 aa10.6□□□□□ -0.71
USP48-210ENST00000489108 DYNC2LI1Q8TCX1 351 aa10.6□□□□□ -0.71
USP48-210ENST00000489108 SLC39A9Q9NUM3 307 aa10.6□□□□□ -0.71
USP48-210ENST00000489108 GSKIPQ9P0R6 139 aa10.6□□□□□ -0.71
USP48-210ENST00000489108 TRGV11A0A075B6L2 103 aa10.59□□□□□ -0.71
USP48-210ENST00000489108 IGLV2-8P01709 118 aa10.59□□□□□ -0.71
USP48-210ENST00000489108 RPL29P47914 159 aaKnown RBP10.59□□□□□ -0.71
USP48-210ENST00000489108 ASAH1Q13510 395 aa10.59□□□□□ -0.71
USP48-210ENST00000489108 FAM159AQ6UWV7 190 aa10.59□□□□□ -0.71
USP48-210ENST00000489108 DAZAP1Q96EP5 407 aaKnown RBP10.59□□□□□ -0.71
USP48-210ENST00000489108 WDR83OSQ9Y284 106 aa10.59□□□□□ -0.71
USP48-210ENST00000489108 TRBV7-9A0A0J9YWB2 115 aa10.58□□□□□ -0.72
USP48-210ENST00000489108 M0R2P5 195 aa10.58□□□□□ -0.72
USP48-210ENST00000489108 GNRH2O43555 120 aa10.58□□□□□ -0.72
USP48-210ENST00000489108 MBPP02686 304 aaPredicted RBP10.58□□□□□ -0.72
USP48-210ENST00000489108 MT1HL1P0DM35 61 aa10.58□□□□□ -0.72
USP48-210ENST00000489108 ACOT6Q3I5F7 207 aaPredicted RBP10.58□□□□□ -0.72
USP48-210ENST00000489108 PYDC2Q56P42 97 aa10.58□□□□□ -0.72
USP48-210ENST00000489108 SLC25A29Q8N8R3 303 aa10.58□□□□□ -0.72
USP48-210ENST00000489108 GPN1Q9HCN4 374 aaPredicted RBP10.58□□□□□ -0.72
USP48-210ENST00000489108 LRP2P98164 4655 aa10.58□□□□□ -0.72
USP48-210ENST00000489108 TRAV8-3A0A0A6YYJ7 113 aa10.57□□□□□ -0.72
USP48-210ENST00000489108 CST7O76096 145 aa10.57□□□□□ -0.72
USP48-210ENST00000489108 RPL37AP61513 92 aaKnown RBP10.57□□□□□ -0.72
USP48-210ENST00000489108 BAK1Q16611 211 aa10.57□□□□□ -0.72
USP48-210ENST00000489108 Q6AWC8 147 aa10.57□□□□□ -0.72
USP48-210ENST00000489108 C20orf85Q9H1P6 137 aa10.57□□□□□ -0.72
USP48-210ENST00000489108 UQCC1Q9NVA1 299 aa10.57□□□□□ -0.72
USP48-210ENST00000489108 FLVCR2Q9UPI3 526 aa10.57□□□□□ -0.72
USP48-210ENST00000489108 L7N2F9 121 aa10.56□□□□□ -0.72
USP48-210ENST00000489108 NBEAP1P0C6P0 100 aa10.56□□□□□ -0.72
USP48-210ENST00000489108 BCAP31P51572 246 aa10.56□□□□□ -0.72
USP48-210ENST00000489108 VAMP2P63027 116 aa10.56□□□□□ -0.72
USP48-210ENST00000489108 DAZ4Q86SG3 579 aaKnown RBP10.56□□□□□ -0.72
USP48-210ENST00000489108 PRADC1Q9BSG0 188 aa10.56□□□□□ -0.72
USP48-210ENST00000489108 SLC25A2Q9BXI2 301 aa10.56□□□□□ -0.72
USP48-210ENST00000489108 GTSF1LQ9H1H1 148 aa10.56□□□□□ -0.72
USP48-210ENST00000489108 DAZ3Q9NR90 486 aaKnown RBP10.56□□□□□ -0.72
USP48-210ENST00000489108 NAGKQ9UJ70 344 aa10.56□□□□□ -0.72
USP48-210ENST00000489108 RNF222A6NCQ9 220 aa10.55□□□□□ -0.72
USP48-210ENST00000489108 FBLL1A6NHQ2 334 aaKnown RBP10.55□□□□□ -0.72
USP48-210ENST00000489108 GCSAMLQ5JQS6 135 aa10.55□□□□□ -0.72
USP48-210ENST00000489108 Q8N976 141 aa10.55□□□□□ -0.72
USP48-210ENST00000489108 SLIRPQ9GZT3 109 aaKnown RBP10.55□□□□□ -0.72
USP48-210ENST00000489108 FAM24AA6NFZ4 105 aa10.54□□□□□ -0.72
USP48-210ENST00000489108 BAXQ07812 192 aa10.54□□□□□ -0.72
USP48-210ENST00000489108 VWC2Q2TAL6 325 aa10.54□□□□□ -0.72
USP48-210ENST00000489108 ATP6V0E2Q8NHE4 81 aa10.54□□□□□ -0.72
USP48-210ENST00000489108 DEDD2Q8WXF8 326 aa10.54□□□□□ -0.72
USP48-210ENST00000489108 FAM167A-AS1Q96KT0 104 aa10.54□□□□□ -0.72
USP48-210ENST00000489108 IGHV3-73A0A0B4J1V6 119 aa10.53□□□□□ -0.72
USP48-210ENST00000489108 UBE2L5PA0A1B0GUS4 154 aa10.53□□□□□ -0.72
USP48-210ENST00000489108 CAV2P51636 162 aa10.53□□□□□ -0.72
USP48-210ENST00000489108 RHOHQ15669 191 aa10.53□□□□□ -0.72
USP48-210ENST00000489108 MIR17HGQ75NE6 70 aa10.53□□□□□ -0.72
USP48-210ENST00000489108 CHAC2Q8WUX2 184 aa10.53□□□□□ -0.72
USP48-210ENST00000489108 LSM5Q9Y4Y9 91 aaKnown RBP10.53□□□□□ -0.72
USP48-210ENST00000489108 TRBV6-4A0A1B0GX49 114 aa10.52□□□□□ -0.73
USP48-210ENST00000489108 RBAKDNA6NC62 111 aa10.52□□□□□ -0.73
USP48-210ENST00000489108 NDUFB6O95139 128 aa10.52□□□□□ -0.73
USP48-210ENST00000489108 IGLV2-11P01706 119 aa10.52□□□□□ -0.73
USP48-210ENST00000489108 PHYHIPLQ96FC7 376 aa10.52□□□□□ -0.73
USP48-210ENST00000489108 DNAJC30Q96LL9 226 aa10.52□□□□□ -0.73
USP48-210ENST00000489108 OR51M1Q9H341 326 aa10.52□□□□□ -0.73
USP48-210ENST00000489108 COX11Q9Y6N1 276 aa10.52□□□□□ -0.73
USP48-210ENST00000489108 V9GYH0 126 aa10.52□□□□□ -0.73
USP48-210ENST00000489108 GGTLC3B5MD39 225 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms