RNA–Protein interactions for RNA: ENST00000489037.1

BRCA1-218, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 4

Gene BRCA1, Length 455 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-218ENST00000489037 NDFIP1Q9BT67 221 aa10.11□□□□□ -0.79
BRCA1-218ENST00000489037 KANTRA0A1W2PQU2 76 aa10.1□□□□□ -0.79
BRCA1-218ENST00000489037 GAGE12BA1L429 117 aa10.1□□□□□ -0.79
BRCA1-218ENST00000489037 GAGE7O76087 117 aa10.1□□□□□ -0.79
BRCA1-218ENST00000489037 GAGE12FP0CL80 117 aa10.1□□□□□ -0.79
BRCA1-218ENST00000489037 GAGE12GP0CL81 117 aa10.1□□□□□ -0.79
BRCA1-218ENST00000489037 GAGE12IP0CL82 117 aa10.1□□□□□ -0.79
BRCA1-218ENST00000489037 DAZ2Q13117 558 aaKnown RBP10.1□□□□□ -0.79
BRCA1-218ENST00000489037 C5orf17Q8NAS9 161 aa10.1□□□□□ -0.79
BRCA1-218ENST00000489037 SUN5Q8TC36 379 aa10.1□□□□□ -0.79
BRCA1-218ENST00000489037 SUMO1P63165 101 aaKnown RBP10.09□□□□□ -0.79
BRCA1-218ENST00000489037 GNG5P63218 68 aa10.09□□□□□ -0.79
BRCA1-218ENST00000489037 EIF5AP63241 154 aaKnown RBP10.09□□□□□ -0.79
BRCA1-218ENST00000489037 IBA57Q5T440 356 aaKnown RBP10.09□□□□□ -0.79
BRCA1-218ENST00000489037 PRR9Q5T870 116 aa10.09□□□□□ -0.79
BRCA1-218ENST00000489037 FAM159AQ6UWV7 190 aa10.09□□□□□ -0.79
BRCA1-218ENST00000489037 STOML3Q8TAV4 291 aa10.09□□□□□ -0.79
BRCA1-218ENST00000489037 TREM1Q9NP99 234 aa10.09□□□□□ -0.79
BRCA1-218ENST00000489037 GSN-AS1Q9NRJ2 163 aa10.09□□□□□ -0.79
BRCA1-218ENST00000489037 CYTL1Q9NRR1 136 aa10.09□□□□□ -0.79
BRCA1-218ENST00000489037 TRGV2A0A075B6R0 118 aa10.08□□□□□ -0.8
BRCA1-218ENST00000489037 A0A1W2PRE2 83 aa10.08□□□□□ -0.8
BRCA1-218ENST00000489037 PFDN1O60925 122 aa10.08□□□□□ -0.8
BRCA1-218ENST00000489037 ZNF415Q09FC8 603 aa10.08□□□□□ -0.8
BRCA1-218ENST00000489037 POM121L12Q8N7R1 296 aa10.08□□□□□ -0.8
BRCA1-218ENST00000489037 ZNF471Q9BX82 626 aaPredicted RBP10.08□□□□□ -0.8
BRCA1-218ENST00000489037 TRGV1A0A0A0MS02 117 aa10.07□□□□□ -0.8
BRCA1-218ENST00000489037 FBLL1A6NHQ2 334 aaKnown RBP10.07□□□□□ -0.8
BRCA1-218ENST00000489037 IFNA7P01567 189 aa10.07□□□□□ -0.8
BRCA1-218ENST00000489037 TCRAP04437 139 aa10.07□□□□□ -0.8
BRCA1-218ENST00000489037 TCL1AP56279 114 aa10.07□□□□□ -0.8
BRCA1-218ENST00000489037 OR5I1Q13606 314 aa10.07□□□□□ -0.8
BRCA1-218ENST00000489037 MUC21Q5SSG8 566 aa10.07□□□□□ -0.8
BRCA1-218ENST00000489037 Q6AWC8 147 aa10.07□□□□□ -0.8
BRCA1-218ENST00000489037 SSX7Q7RTT5 188 aa10.07□□□□□ -0.8
BRCA1-218ENST00000489037 LINC00612Q8N6U2 182 aa10.07□□□□□ -0.8
BRCA1-218ENST00000489037 C11orf72Q8NBR9 251 aa10.07□□□□□ -0.8
BRCA1-218ENST00000489037 NKX6-2Q9C056 277 aaPredicted RBP10.07□□□□□ -0.8
BRCA1-218ENST00000489037 EPDR1Q9UM22 224 aa10.07□□□□□ -0.8
BRCA1-218ENST00000489037 TRGV11A0A075B6L2 103 aa10.06□□□□□ -0.8
BRCA1-218ENST00000489037 TRAV21A0A0B4J279 112 aa10.06□□□□□ -0.8
BRCA1-218ENST00000489037 MAP1LC3B2A6NCE7 125 aa10.06□□□□□ -0.8
BRCA1-218ENST00000489037 BCL2L11O43521 198 aa10.06□□□□□ -0.8
BRCA1-218ENST00000489037 NUDT3O95989 172 aa10.06□□□□□ -0.8
BRCA1-218ENST00000489037 SEC11BP0C7V7 166 aa10.06□□□□□ -0.8
BRCA1-218ENST00000489037 FGF8P55075 233 aaPredicted RBP10.06□□□□□ -0.8
BRCA1-218ENST00000489037 ZNF726P1Q15940 193 aa10.06□□□□□ -0.8
BRCA1-218ENST00000489037 Q6ZTI0 123 aa10.06□□□□□ -0.8
BRCA1-218ENST00000489037 CYB561D1Q8N8Q1 229 aa10.06□□□□□ -0.8
BRCA1-218ENST00000489037 OR11H4Q8NGC9 324 aa10.06□□□□□ -0.8
BRCA1-218ENST00000489037 ATG101Q9BSB4 218 aa10.06□□□□□ -0.8
BRCA1-218ENST00000489037 MAP1LC3BQ9GZQ8 125 aa10.06□□□□□ -0.8
BRCA1-218ENST00000489037 NAGKQ9UJ70 344 aa10.06□□□□□ -0.8
BRCA1-218ENST00000489037 NACAE9PAV3 2078 aa10.06□□□□□ -0.8
BRCA1-218ENST00000489037 MUC4Q99102 2169 aa10.05□□□□□ -0.8
BRCA1-218ENST00000489037 TRAV8-1A0A0A6YYK1 113 aa10.05□□□□□ -0.8
BRCA1-218ENST00000489037 GGTLC3B5MD39 225 aa10.05□□□□□ -0.8
BRCA1-218ENST00000489037 UMAD1C9J7I0 102 aa10.05□□□□□ -0.8
BRCA1-218ENST00000489037 PPT1P50897 306 aa10.05□□□□□ -0.8
BRCA1-218ENST00000489037 UBE2G2P60604 165 aa10.05□□□□□ -0.8
BRCA1-218ENST00000489037 RNF212Q495C1 297 aa10.05□□□□□ -0.8
BRCA1-218ENST00000489037 ZFP69Q49AA0 526 aa10.05□□□□□ -0.8
BRCA1-218ENST00000489037 SGK494Q96LW2 274 aa10.05□□□□□ -0.8
BRCA1-218ENST00000489037 TMPRSS5Q9H3S3 457 aa10.05□□□□□ -0.8
BRCA1-218ENST00000489037 TP53TG3Q9ULZ0 132 aa10.05□□□□□ -0.8
BRCA1-218ENST00000489037 PSG8Q9UQ74 426 aa10.05□□□□□ -0.8
BRCA1-218ENST00000489037 KLF12Q9Y4X4 402 aa10.05□□□□□ -0.8
BRCA1-218ENST00000489037 F6UZH7 168 aa10.04□□□□□ -0.8
BRCA1-218ENST00000489037 SPINK4O60575 86 aa10.04□□□□□ -0.8
BRCA1-218ENST00000489037 FLI1Q01543 452 aaPredicted RBP10.04□□□□□ -0.8
BRCA1-218ENST00000489037 TMEM183BQ1AE95 376 aa10.04□□□□□ -0.8
BRCA1-218ENST00000489037 LGALS9BQ3B8N2 356 aa10.04□□□□□ -0.8
BRCA1-218ENST00000489037 SAPCD1Q5SSQ6 148 aa10.04□□□□□ -0.8
BRCA1-218ENST00000489037 Q6ZQT7 251 aa10.04□□□□□ -0.8
BRCA1-218ENST00000489037 TMUB2Q71RG4 321 aa10.04□□□□□ -0.8
BRCA1-218ENST00000489037 PRNTQ86SH4 94 aa10.04□□□□□ -0.8
BRCA1-218ENST00000489037 TMEM183AQ8IXX5 376 aa10.04□□□□□ -0.8
BRCA1-218ENST00000489037 TMEM75Q8N9X5 138 aa10.04□□□□□ -0.8
BRCA1-218ENST00000489037 KCNS1Q96KK3 526 aa10.04□□□□□ -0.8
BRCA1-218ENST00000489037 KMT2AQ03164 3969 aa10.04□□□□□ -0.8
BRCA1-218ENST00000489037 VPS13DQ5THJ4 4388 aa10.03□□□□□ -0.8
BRCA1-218ENST00000489037 TPT1P13693 172 aaKnown RBP10.03□□□□□ -0.8
BRCA1-218ENST00000489037 SMUG1Q53HV7 270 aa10.03□□□□□ -0.8
BRCA1-218ENST00000489037 C18orf15Q96N68 181 aa10.03□□□□□ -0.8
BRCA1-218ENST00000489037 SPXQ9BT56 116 aa10.03□□□□□ -0.8
BRCA1-218ENST00000489037 SDF2L1Q9HCN8 221 aa10.03□□□□□ -0.8
BRCA1-218ENST00000489037 TRAV26-1A0A087WT03 109 aa10.02□□□□□ -0.81
BRCA1-218ENST00000489037 FAM74A7A6NL05 159 aa10.02□□□□□ -0.81
BRCA1-218ENST00000489037 CCL18P55774 89 aa10.02□□□□□ -0.81
BRCA1-218ENST00000489037 FAM3BP58499 235 aaPredicted RBP10.02□□□□□ -0.81
BRCA1-218ENST00000489037 EIF5AL1Q6IS14 154 aaKnown RBP10.02□□□□□ -0.81
BRCA1-218ENST00000489037 DPPA3Q6W0C5 159 aa10.02□□□□□ -0.81
BRCA1-218ENST00000489037 FAM213BQ8TBF2 198 aa10.02□□□□□ -0.81
BRCA1-218ENST00000489037 HIST1H2BAQ96A08 127 aa10.02□□□□□ -0.81
BRCA1-218ENST00000489037 TVP23CQ96ET8 276 aa10.02□□□□□ -0.81
BRCA1-218ENST00000489037 MRPL16Q9NX20 251 aaKnown RBP10.02□□□□□ -0.81
BRCA1-218ENST00000489037 DNAH6Q9C0G6 4158 aa10.01□□□□□ -0.81
BRCA1-218ENST00000489037 A0A0J9YY99 117 aa10.01□□□□□ -0.81
BRCA1-218ENST00000489037 PEX7O00628 323 aa10.01□□□□□ -0.81
BRCA1-218ENST00000489037 GCGP01275 180 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 96.4 ms