RNA–Protein interactions for RNA: ENST00000488809.2

PTCH1-211, Transcript of patched 1, humanhuman

TSL 3

Gene PTCH1, Length 301 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-211ENST00000488809 CSN1S1P47710 185 aa4.33□□□□□ -1.72
PTCH1-211ENST00000488809 SCXQ7RTU7 201 aa4.33□□□□□ -1.72
PTCH1-211ENST00000488809 NRARPQ7Z6K4 114 aa4.33□□□□□ -1.72
PTCH1-211ENST00000488809 ZFAND2AQ8N6M9 145 aa4.33□□□□□ -1.72
PTCH1-211ENST00000488809 RAB2BQ8WUD1 216 aa4.33□□□□□ -1.72
PTCH1-211ENST00000488809 ATP5SQ99766 215 aa4.33□□□□□ -1.72
PTCH1-211ENST00000488809 PRADC1Q9BSG0 188 aa4.33□□□□□ -1.72
PTCH1-211ENST00000488809 C20orf85Q9H1P6 137 aa4.33□□□□□ -1.72
PTCH1-211ENST00000488809 GPN1Q9HCN4 374 aaPredicted RBP4.33□□□□□ -1.72
PTCH1-211ENST00000488809 ZNF492Q9P255 531 aa4.33□□□□□ -1.72
PTCH1-211ENST00000488809 PKHD1L1Q86WI1 4243 aa4.32□□□□□ -1.72
PTCH1-211ENST00000488809 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.32□□□□□ -1.72
PTCH1-211ENST00000488809 IGKV2-40A0A087WW87 121 aaPredicted RBP4.32□□□□□ -1.72
PTCH1-211ENST00000488809 RBFOX3A6NFN3 312 aa4.32□□□□□ -1.72
PTCH1-211ENST00000488809 CIDEAO60543 219 aa4.32□□□□□ -1.72
PTCH1-211ENST00000488809 NOL3O60936 208 aaKnown RBP4.32□□□□□ -1.72
PTCH1-211ENST00000488809 IGKV2D-40P01614 121 aaPredicted RBP4.32□□□□□ -1.72
PTCH1-211ENST00000488809 IGHV3-30P01768 117 aa4.32□□□□□ -1.72
PTCH1-211ENST00000488809 IGHV3-33P01772 117 aa4.32□□□□□ -1.72
PTCH1-211ENST00000488809 SEC11BP0C7V7 166 aa4.32□□□□□ -1.72
PTCH1-211ENST00000488809 IGHV3-30-3P0DP02 117 aa4.32□□□□□ -1.72
PTCH1-211ENST00000488809 IGHV3-30-5P0DP03 117 aa4.32□□□□□ -1.72
PTCH1-211ENST00000488809 RPL29P47914 159 aaKnown RBP4.32□□□□□ -1.72
PTCH1-211ENST00000488809 BCAP31P51572 246 aa4.32□□□□□ -1.72
PTCH1-211ENST00000488809 ZNF138P52744 262 aa4.32□□□□□ -1.72
PTCH1-211ENST00000488809 RHOHQ15669 191 aa4.32□□□□□ -1.72
PTCH1-211ENST00000488809 BAK1Q16611 211 aa4.32□□□□□ -1.72
PTCH1-211ENST00000488809 TMEM183BQ1AE95 376 aa4.32□□□□□ -1.72
PTCH1-211ENST00000488809 IAH1Q2TAA2 248 aaPredicted RBP4.32□□□□□ -1.72
PTCH1-211ENST00000488809 PYDC2Q56P42 97 aa4.32□□□□□ -1.72
PTCH1-211ENST00000488809 MUC21Q5SSG8 566 aa4.32□□□□□ -1.72
PTCH1-211ENST00000488809 LELP1Q5T871 98 aa4.32□□□□□ -1.72
PTCH1-211ENST00000488809 MIC13Q5XKP0 118 aa4.32□□□□□ -1.72
PTCH1-211ENST00000488809 FAM122CQ6P4D5 195 aa4.32□□□□□ -1.72
PTCH1-211ENST00000488809 TMEM183AQ8IXX5 376 aa4.32□□□□□ -1.72
PTCH1-211ENST00000488809 EXOC3-AS1Q8N2X6 119 aa4.32□□□□□ -1.72
PTCH1-211ENST00000488809 RMI2Q96E14 147 aa4.32□□□□□ -1.72
PTCH1-211ENST00000488809 SOSTQ9BQB4 213 aa4.32□□□□□ -1.72
PTCH1-211ENST00000488809 BCL7BQ9BQE9 202 aa4.32□□□□□ -1.72
PTCH1-211ENST00000488809 CHAC1Q9BUX1 264 aa4.32□□□□□ -1.72
PTCH1-211ENST00000488809 UQCC1Q9NVA1 299 aa4.32□□□□□ -1.72
PTCH1-211ENST00000488809 C7orf66A4D0T2 115 aa4.31□□□□□ -1.72
PTCH1-211ENST00000488809 RBAKDNA6NC62 111 aa4.31□□□□□ -1.72
PTCH1-211ENST00000488809 FBLL1A6NHQ2 334 aaKnown RBP4.31□□□□□ -1.72
PTCH1-211ENST00000488809 GGTLC3B5MD39 225 aa4.31□□□□□ -1.72
PTCH1-211ENST00000488809 M0R2P5 195 aa4.31□□□□□ -1.72
PTCH1-211ENST00000488809 NDUFB4O95168 129 aa4.31□□□□□ -1.72
PTCH1-211ENST00000488809 IGLV2-8P01709 118 aa4.31□□□□□ -1.72
PTCH1-211ENST00000488809 PYYP10082 97 aa4.31□□□□□ -1.72
PTCH1-211ENST00000488809 PVALBP20472 110 aaPredicted RBP4.31□□□□□ -1.72
PTCH1-211ENST00000488809 INPP1P49441 399 aa4.31□□□□□ -1.72
PTCH1-211ENST00000488809 CAV2P51636 162 aa4.31□□□□□ -1.72
PTCH1-211ENST00000488809 HBG1P69891 147 aa4.31□□□□□ -1.72
PTCH1-211ENST00000488809 HBG2P69892 147 aa4.31□□□□□ -1.72
PTCH1-211ENST00000488809 BAXQ07812 192 aa4.31□□□□□ -1.72
PTCH1-211ENST00000488809 ZNF266Q14584 549 aa4.31□□□□□ -1.72
PTCH1-211ENST00000488809 SPCS2Q15005 226 aa4.31□□□□□ -1.72
PTCH1-211ENST00000488809 PRR9Q5T870 116 aa4.31□□□□□ -1.72
PTCH1-211ENST00000488809 Q8N976 141 aa4.31□□□□□ -1.72
PTCH1-211ENST00000488809 ATP6V0E2Q8NHE4 81 aa4.31□□□□□ -1.72
PTCH1-211ENST00000488809 TRIM63Q969Q1 353 aa4.31□□□□□ -1.72
PTCH1-211ENST00000488809 GSKIPQ9P0R6 139 aa4.31□□□□□ -1.72
PTCH1-211ENST00000488809 WDR83OSQ9Y284 106 aa4.31□□□□□ -1.72
PTCH1-211ENST00000488809 LENEPQ9Y5L5 61 aa4.31□□□□□ -1.72
PTCH1-211ENST00000488809 LOC100131303A0A0U1RQF7 123 aa4.3□□□□□ -1.72
PTCH1-211ENST00000488809 UBE2L5PA0A1B0GUS4 154 aa4.3□□□□□ -1.72
PTCH1-211ENST00000488809 NAP1L6A6NFF2 107 aa4.3□□□□□ -1.72
PTCH1-211ENST00000488809 NBEAP1P0C6P0 100 aa4.3□□□□□ -1.72
PTCH1-211ENST00000488809 GATA1P15976 413 aaPredicted RBP4.3□□□□□ -1.72
PTCH1-211ENST00000488809 S100A11P31949 105 aa4.3□□□□□ -1.72
PTCH1-211ENST00000488809 ARL16Q0P5N6 197 aa4.3□□□□□ -1.72
PTCH1-211ENST00000488809 Q6AWC8 147 aa4.3□□□□□ -1.72
PTCH1-211ENST00000488809 STX12Q86Y82 276 aa4.3□□□□□ -1.72
PTCH1-211ENST00000488809 Q8TAT8 98 aa4.3□□□□□ -1.72
PTCH1-211ENST00000488809 MRPS26Q9BYN8 205 aaKnown RBP4.3□□□□□ -1.72
PTCH1-211ENST00000488809 GTSF1LQ9H1H1 148 aa4.3□□□□□ -1.72
PTCH1-211ENST00000488809 OR51M1Q9H341 326 aa4.3□□□□□ -1.72
PTCH1-211ENST00000488809 NAGKQ9UJ70 344 aa4.3□□□□□ -1.72
PTCH1-211ENST00000488809 URGCP-MRPS24S4R325 110 aa4.3□□□□□ -1.72
PTCH1-211ENST00000488809 RNF213Q63HN8 5207 aa4.3□□□□□ -1.72
PTCH1-211ENST00000488809 TRAV8-1A0A0A6YYK1 113 aa4.29□□□□□ -1.72
PTCH1-211ENST00000488809 TRAV21A0A0B4J279 112 aa4.29□□□□□ -1.72
PTCH1-211ENST00000488809 IGHV3-16A0A0C4DH30 117 aa4.29□□□□□ -1.72
PTCH1-211ENST00000488809 TRBV6-4A0A1B0GX49 114 aa4.29□□□□□ -1.72
PTCH1-211ENST00000488809 C5orf51A6NDU8 294 aa4.29□□□□□ -1.72
PTCH1-211ENST00000488809 CENPXA8MT69 81 aa4.29□□□□□ -1.72
PTCH1-211ENST00000488809 LECT2O14960 151 aa4.29□□□□□ -1.72
PTCH1-211ENST00000488809 CST7O76096 145 aa4.29□□□□□ -1.72
PTCH1-211ENST00000488809 NDUFB6O95139 128 aa4.29□□□□□ -1.72
PTCH1-211ENST00000488809 IGLV2-11P01706 119 aa4.29□□□□□ -1.72
PTCH1-211ENST00000488809 MBPP02686 304 aaPredicted RBP4.29□□□□□ -1.72
PTCH1-211ENST00000488809 OR10J4P0C629 311 aa4.29□□□□□ -1.72
PTCH1-211ENST00000488809 FGF7P21781 194 aa4.29□□□□□ -1.72
PTCH1-211ENST00000488809 S100A5P33763 92 aa4.29□□□□□ -1.72
PTCH1-211ENST00000488809 TMBIM6P55061 237 aa4.29□□□□□ -1.72
PTCH1-211ENST00000488809 RPL37AP61513 92 aaKnown RBP4.29□□□□□ -1.72
PTCH1-211ENST00000488809 WFDC2Q14508 124 aa4.29□□□□□ -1.72
PTCH1-211ENST00000488809 ATP6V1FQ16864 119 aa4.29□□□□□ -1.72
PTCH1-211ENST00000488809 VWC2Q2TAL6 325 aa4.29□□□□□ -1.72
PTCH1-211ENST00000488809 C14orf177Q52M58 125 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms