RNA–Protein interactions for RNA: ENST00000488384.1

ERGIC3-216, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 766 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-216ENST00000488384 DEFB131BA0A096LNP1 70 aa11.37□□□□□ -0.59
ERGIC3-216ENST00000488384 A0A1W2PRE2 83 aa11.37□□□□□ -0.59
ERGIC3-216ENST00000488384 UMAD1C9J7I0 102 aa11.37□□□□□ -0.59
ERGIC3-216ENST00000488384 UBE2G2P60604 165 aa11.37□□□□□ -0.59
ERGIC3-216ENST00000488384 LINC00476Q8WZB0 136 aa11.37□□□□□ -0.59
ERGIC3-216ENST00000488384 LINC00467Q9BRT7 94 aa11.37□□□□□ -0.59
ERGIC3-216ENST00000488384 SERTM2A0A1B0GWG4 89 aa11.36□□□□□ -0.59
ERGIC3-216ENST00000488384 IGLL5B9A064 214 aa11.36□□□□□ -0.59
ERGIC3-216ENST00000488384 DAD1P61803 113 aa11.36□□□□□ -0.59
ERGIC3-216ENST00000488384 SUMO1P63165 101 aaKnown RBP11.36□□□□□ -0.59
ERGIC3-216ENST00000488384 CCDC28AQ8IWP9 274 aa11.36□□□□□ -0.59
ERGIC3-216ENST00000488384 FAM213BQ8TBF2 198 aa11.36□□□□□ -0.59
ERGIC3-216ENST00000488384 TVP23CQ96ET8 276 aa11.36□□□□□ -0.59
ERGIC3-216ENST00000488384 DNAH6Q9C0G6 4158 aa11.35□□□□□ -0.59
ERGIC3-216ENST00000488384 Q6AWC8 147 aa11.35□□□□□ -0.59
ERGIC3-216ENST00000488384 SGK494Q96LW2 274 aa11.35□□□□□ -0.59
ERGIC3-216ENST00000488384 NOP10Q9NPE3 64 aaKnown RBP11.35□□□□□ -0.59
ERGIC3-216ENST00000488384 EPDR1Q9UM22 224 aa11.35□□□□□ -0.59
ERGIC3-216ENST00000488384 TIMM8BQ9Y5J9 83 aaPredicted RBP11.35□□□□□ -0.59
ERGIC3-216ENST00000488384 IGHV4-4A0A075B6R2 117 aa11.34□□□□□ -0.59
ERGIC3-216ENST00000488384 FAM74A7A6NL05 159 aa11.34□□□□□ -0.59
ERGIC3-216ENST00000488384 IGLV2-11P01706 119 aa11.34□□□□□ -0.59
ERGIC3-216ENST00000488384 DEFB130BP0DP73 79 aa11.34□□□□□ -0.59
ERGIC3-216ENST00000488384 DEFB130AP0DP74 79 aa11.34□□□□□ -0.59
ERGIC3-216ENST00000488384 TCTAP57738 103 aa11.34□□□□□ -0.59
ERGIC3-216ENST00000488384 ANXA2RQ3ZCQ2 193 aa11.34□□□□□ -0.59
ERGIC3-216ENST00000488384 DPPA3Q6W0C5 159 aa11.34□□□□□ -0.59
ERGIC3-216ENST00000488384 C9orf62Q8N4C0 152 aa11.34□□□□□ -0.59
ERGIC3-216ENST00000488384 EIF4E3Q8N5X7 224 aaKnown RBP11.34□□□□□ -0.59
ERGIC3-216ENST00000488384 CYB561D1Q8N8Q1 229 aa11.34□□□□□ -0.59
ERGIC3-216ENST00000488384 C11orf72Q8NBR9 251 aa11.34□□□□□ -0.59
ERGIC3-216ENST00000488384 MBD3L1Q8WWY6 194 aa11.34□□□□□ -0.59
ERGIC3-216ENST00000488384 ATG101Q9BSB4 218 aa11.34□□□□□ -0.59
ERGIC3-216ENST00000488384 APLNQ9ULZ1 77 aa11.34□□□□□ -0.59
ERGIC3-216ENST00000488384 IGHV1OR15-1A0A075B7D0 117 aa11.33□□□□□ -0.6
ERGIC3-216ENST00000488384 CBY3A6NI87 242 aa11.33□□□□□ -0.6
ERGIC3-216ENST00000488384 F6UZH7 168 aa11.33□□□□□ -0.6
ERGIC3-216ENST00000488384 RGS13O14921 159 aa11.33□□□□□ -0.6
ERGIC3-216ENST00000488384 HTN3P15516 51 aa11.33□□□□□ -0.6
ERGIC3-216ENST00000488384 LINC00612Q8N6U2 182 aa11.33□□□□□ -0.6
ERGIC3-216ENST00000488384 ZNF680Q8NEM1 530 aa11.33□□□□□ -0.6
ERGIC3-216ENST00000488384 SFT2D1Q8WV19 159 aa11.33□□□□□ -0.6
ERGIC3-216ENST00000488384 TP53TG3Q9ULZ0 132 aa11.33□□□□□ -0.6
ERGIC3-216ENST00000488384 SNURFLB1AK76 121 aa11.32□□□□□ -0.6
ERGIC3-216ENST00000488384 K7EQM0 130 aa11.32□□□□□ -0.6
ERGIC3-216ENST00000488384 MUC21Q5SSG8 566 aa11.32□□□□□ -0.6
ERGIC3-216ENST00000488384 TMEM75Q8N9X5 138 aa11.32□□□□□ -0.6
ERGIC3-216ENST00000488384 TREM1Q9NP99 234 aa11.32□□□□□ -0.6
ERGIC3-216ENST00000488384 PSG8Q9UQ74 426 aa11.32□□□□□ -0.6
ERGIC3-216ENST00000488384 A0A1B0GV50 99 aa11.31□□□□□ -0.6
ERGIC3-216ENST00000488384 PEX7O00628 323 aa11.31□□□□□ -0.6
ERGIC3-216ENST00000488384 IFNA7P01567 189 aa11.31□□□□□ -0.6
ERGIC3-216ENST00000488384 FLI1Q01543 452 aaPredicted RBP11.31□□□□□ -0.6
ERGIC3-216ENST00000488384 DAZ2Q13117 558 aaKnown RBP11.31□□□□□ -0.6
ERGIC3-216ENST00000488384 ZFP69Q49AA0 526 aa11.31□□□□□ -0.6
ERGIC3-216ENST00000488384 SLC51BQ86UW2 128 aa11.31□□□□□ -0.6
ERGIC3-216ENST00000488384 C8orf49Q96NF6 230 aa11.31□□□□□ -0.6
ERGIC3-216ENST00000488384 NKX6-2Q9C056 277 aaPredicted RBP11.31□□□□□ -0.6
ERGIC3-216ENST00000488384 GSN-AS1Q9NRJ2 163 aa11.31□□□□□ -0.6
ERGIC3-216ENST00000488384 ARL2-SNX15V9GYD0 113 aa11.31□□□□□ -0.6
ERGIC3-216ENST00000488384 LY6G6CO95867 125 aa11.3□□□□□ -0.6
ERGIC3-216ENST00000488384 H2AFB1P0C5Y9 115 aa11.3□□□□□ -0.6
ERGIC3-216ENST00000488384 TCL1AP56279 114 aa11.3□□□□□ -0.6
ERGIC3-216ENST00000488384 IBA57Q5T440 356 aaKnown RBP11.3□□□□□ -0.6
ERGIC3-216ENST00000488384 EIF5AL1Q6IS14 154 aaKnown RBP11.3□□□□□ -0.6
ERGIC3-216ENST00000488384 LINC00479Q96M42 142 aa11.3□□□□□ -0.6
ERGIC3-216ENST00000488384 NDFIP1Q9BT67 221 aa11.3□□□□□ -0.6
ERGIC3-216ENST00000488384 TRAV34A0A0B4J273 112 aa11.29□□□□□ -0.6
ERGIC3-216ENST00000488384 FBLL1A6NHQ2 334 aaKnown RBP11.29□□□□□ -0.6
ERGIC3-216ENST00000488384 ATP5G3P48201 142 aa11.29□□□□□ -0.6
ERGIC3-216ENST00000488384 RAB5CP51148 216 aa11.29□□□□□ -0.6
ERGIC3-216ENST00000488384 LGALS9CQ6DKI2 356 aa11.29□□□□□ -0.6
ERGIC3-216ENST00000488384 Q6ZTI0 123 aa11.29□□□□□ -0.6
ERGIC3-216ENST00000488384 PRNTQ86SH4 94 aa11.29□□□□□ -0.6
ERGIC3-216ENST00000488384 Q86TA4 180 aa11.29□□□□□ -0.6
ERGIC3-216ENST00000488384 HIST1H2BAQ96A08 127 aa11.29□□□□□ -0.6
ERGIC3-216ENST00000488384 NDUFAF3Q9BU61 184 aa11.29□□□□□ -0.6
ERGIC3-216ENST00000488384 KLF12Q9Y4X4 402 aa11.29□□□□□ -0.6
ERGIC3-216ENST00000488384 TRAV21A0A0B4J279 112 aa11.28□□□□□ -0.6
ERGIC3-216ENST00000488384 GAGE12BA1L429 117 aa11.28□□□□□ -0.6
ERGIC3-216ENST00000488384 PAGE4O60829 102 aa11.28□□□□□ -0.6
ERGIC3-216ENST00000488384 GAGE7O76087 117 aa11.28□□□□□ -0.6
ERGIC3-216ENST00000488384 ATP5G1P05496 136 aa11.28□□□□□ -0.6
ERGIC3-216ENST00000488384 GAGE12FP0CL80 117 aa11.28□□□□□ -0.6
ERGIC3-216ENST00000488384 GAGE12GP0CL81 117 aa11.28□□□□□ -0.6
ERGIC3-216ENST00000488384 GAGE12IP0CL82 117 aa11.28□□□□□ -0.6
ERGIC3-216ENST00000488384 SULT1A2P50226 295 aa11.28□□□□□ -0.6
ERGIC3-216ENST00000488384 ZNF80P51504 273 aaPredicted RBP11.28□□□□□ -0.6
ERGIC3-216ENST00000488384 TDRG1Q3Y452 100 aa11.28□□□□□ -0.6
ERGIC3-216ENST00000488384 CST9LP1Q5W188 147 aa11.28□□□□□ -0.6
ERGIC3-216ENST00000488384 TMEM88Q6PEY1 159 aa11.28□□□□□ -0.6
ERGIC3-216ENST00000488384 FAM210BQ96KR6 192 aa11.28□□□□□ -0.6
ERGIC3-216ENST00000488384 TCEAL7Q9BRU2 100 aa11.28□□□□□ -0.6
ERGIC3-216ENST00000488384 NAGKQ9UJ70 344 aa11.28□□□□□ -0.6
ERGIC3-216ENST00000488384 KMT2AQ03164 3969 aa11.27□□□□□ -0.6
ERGIC3-216ENST00000488384 GCGP01275 180 aa11.27□□□□□ -0.61
ERGIC3-216ENST00000488384 PPT1P50897 306 aa11.27□□□□□ -0.61
ERGIC3-216ENST00000488384 ZNF415Q09FC8 603 aa11.27□□□□□ -0.61
ERGIC3-216ENST00000488384 TMEM183BQ1AE95 376 aa11.27□□□□□ -0.61
ERGIC3-216ENST00000488384 FAM159AQ6UWV7 190 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms