RNA–Protein interactions for RNA: ENST00000488058.1

RNF38-208, Transcript of ring finger protein 38, humanhuman

TSL 3

Gene RNF38, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-208ENST00000488058 GOLT1AQ6ZVE7 132 aa16.64■□□□□ 0.25
RNF38-208ENST00000488058 DNAH6Q9C0G6 4158 aa16.64■□□□□ 0.25
RNF38-208ENST00000488058 BIRC6Q9NR09 4857 aa16.63■□□□□ 0.25
RNF38-208ENST00000488058 TRGV1A0A0A0MS02 117 aa16.63■□□□□ 0.25
RNF38-208ENST00000488058 GNG5P63218 68 aa16.63■□□□□ 0.25
RNF38-208ENST00000488058 MUC21Q5SSG8 566 aa16.63■□□□□ 0.25
RNF38-208ENST00000488058 TMPRSS5Q9H3S3 457 aa16.63■□□□□ 0.25
RNF38-208ENST00000488058 KLF12Q9Y4X4 402 aa16.63■□□□□ 0.25
RNF38-208ENST00000488058 TRGV2A0A075B6R0 118 aa16.62■□□□□ 0.25
RNF38-208ENST00000488058 GCHFRP30047 84 aa16.62■□□□□ 0.25
RNF38-208ENST00000488058 GNPNAT1Q96EK6 184 aaPredicted RBP16.62■□□□□ 0.25
RNF38-208ENST00000488058 ACTR3CQ9C0K3 210 aaPredicted RBP16.62■□□□□ 0.25
RNF38-208ENST00000488058 TRAV26-1A0A087WT03 109 aa16.61■□□□□ 0.25
RNF38-208ENST00000488058 A0A0J9YY99 117 aa16.61■□□□□ 0.25
RNF38-208ENST00000488058 G3V3Q6 166 aa16.61■□□□□ 0.25
RNF38-208ENST00000488058 ARPC5O15511 151 aa16.61■□□□□ 0.25
RNF38-208ENST00000488058 HOXA5P20719 270 aa16.61■□□□□ 0.25
RNF38-208ENST00000488058 TCL1AP56279 114 aa16.61■□□□□ 0.25
RNF38-208ENST00000488058 IQCF2Q8IXL9 164 aa16.61■□□□□ 0.25
RNF38-208ENST00000488058 LENEPQ9Y5L5 61 aa16.61■□□□□ 0.25
RNF38-208ENST00000488058 NACAE9PAV3 2078 aa16.6■□□□□ 0.25
RNF38-208ENST00000488058 SMLR1H3BR10 107 aa16.6■□□□□ 0.25
RNF38-208ENST00000488058 IBA57Q5T440 356 aaKnown RBP16.6■□□□□ 0.25
RNF38-208ENST00000488058 TRAV8-1A0A0A6YYK1 113 aa16.59■□□□□ 0.25
RNF38-208ENST00000488058 CXorf1O96002 111 aa16.59■□□□□ 0.25
RNF38-208ENST00000488058 ZNF415Q09FC8 603 aa16.59■□□□□ 0.25
RNF38-208ENST00000488058 TMED6Q8WW62 240 aa16.59■□□□□ 0.25
RNF38-208ENST00000488058 MRPL16Q9NX20 251 aaKnown RBP16.59■□□□□ 0.25
RNF38-208ENST00000488058 NAGKQ9UJ70 344 aa16.59■□□□□ 0.25
RNF38-208ENST00000488058 SSX7Q7RTT5 188 aa16.58■□□□□ 0.24
RNF38-208ENST00000488058 ST6GAL2Q96JF0 529 aa16.58■□□□□ 0.24
RNF38-208ENST00000488058 SGK494Q96LW2 274 aa16.58■□□□□ 0.24
RNF38-208ENST00000488058 F6UZH7 168 aa16.57■□□□□ 0.24
RNF38-208ENST00000488058 SPINK4O60575 86 aa16.57■□□□□ 0.24
RNF38-208ENST00000488058 CCL18P55774 89 aa16.57■□□□□ 0.24
RNF38-208ENST00000488058 LGALS9BQ3B8N2 356 aa16.57■□□□□ 0.24
RNF38-208ENST00000488058 Q6AWC8 147 aa16.57■□□□□ 0.24
RNF38-208ENST00000488058 FAM159AQ6UWV7 190 aa16.57■□□□□ 0.24
RNF38-208ENST00000488058 ARL6IP6Q8N6S5 226 aa16.57■□□□□ 0.24
RNF38-208ENST00000488058 TMEM167BQ9NRX6 74 aa16.57■□□□□ 0.24
RNF38-208ENST00000488058 C5orf17Q8NAS9 161 aa16.56■□□□□ 0.24
RNF38-208ENST00000488058 TREM1Q9NP99 234 aa16.56■□□□□ 0.24
RNF38-208ENST00000488058 DNAH10Q8IVF4 4471 aa16.56■□□□□ 0.24
RNF38-208ENST00000488058 TAAR5O14804 337 aa16.55■□□□□ 0.24
RNF38-208ENST00000488058 TMEM183BQ1AE95 376 aa16.55■□□□□ 0.24
RNF38-208ENST00000488058 AKR1C8PQ5T2L2 129 aa16.55■□□□□ 0.24
RNF38-208ENST00000488058 TMEM183AQ8IXX5 376 aa16.55■□□□□ 0.24
RNF38-208ENST00000488058 SUN5Q8TC36 379 aa16.55■□□□□ 0.24
RNF38-208ENST00000488058 K7EQM0 130 aa16.54■□□□□ 0.24
RNF38-208ENST00000488058 IGHV3-53P01767 116 aa16.54■□□□□ 0.24
RNF38-208ENST00000488058 TCRAP04437 139 aa16.54■□□□□ 0.24
RNF38-208ENST00000488058 FAM3BP58499 235 aaPredicted RBP16.54■□□□□ 0.24
RNF38-208ENST00000488058 SUMO1P63165 101 aaKnown RBP16.54■□□□□ 0.24
RNF38-208ENST00000488058 TVP23CQ96ET8 276 aa16.54■□□□□ 0.24
RNF38-208ENST00000488058 NDFIP1Q9BT67 221 aa16.54■□□□□ 0.24
RNF38-208ENST00000488058 MDFICQ9P1T7 246 aa16.54■□□□□ 0.24
RNF38-208ENST00000488058 TRGV11A0A075B6L2 103 aa16.53■□□□□ 0.24
RNF38-208ENST00000488058 CTXND1A0A1B0GTU2 59 aa16.53■□□□□ 0.24
RNF38-208ENST00000488058 SERTM2A0A1B0GWG4 89 aa16.53■□□□□ 0.24
RNF38-208ENST00000488058 ZNF726P1Q15940 193 aa16.53■□□□□ 0.24
RNF38-208ENST00000488058 C18orf15Q96N68 181 aa16.53■□□□□ 0.24
RNF38-208ENST00000488058 LINC00588Q9Y4M8 146 aa16.53■□□□□ 0.24
RNF38-208ENST00000488058 TRAV21A0A0B4J279 112 aa16.52■□□□□ 0.24
RNF38-208ENST00000488058 GGTLC3B5MD39 225 aa16.52■□□□□ 0.24
RNF38-208ENST00000488058 LINC00336Q6ZUF6 198 aa16.52■□□□□ 0.24
RNF38-208ENST00000488058 CYTL1Q9NRR1 136 aa16.52■□□□□ 0.24
RNF38-208ENST00000488058 FRAS1Q86XX4 4008 aa16.52■□□□□ 0.24
RNF38-208ENST00000488058 FGF8P55075 233 aaPredicted RBP16.51■□□□□ 0.23
RNF38-208ENST00000488058 Q6ZR54 194 aa16.51■□□□□ 0.23
RNF38-208ENST00000488058 UBE2G2P60604 165 aa16.5■□□□□ 0.23
RNF38-208ENST00000488058 ZNRF2Q8NHG8 242 aa16.5■□□□□ 0.23
RNF38-208ENST00000488058 EPDR1Q9UM22 224 aa16.5■□□□□ 0.23
RNF38-208ENST00000488058 PSG8Q9UQ74 426 aa16.5■□□□□ 0.23
RNF38-208ENST00000488058 H3BNG1 76 aa16.49■□□□□ 0.23
RNF38-208ENST00000488058 RTL8CO15255 209 aa16.49■□□□□ 0.23
RNF38-208ENST00000488058 PRNTQ86SH4 94 aa16.49■□□□□ 0.23
RNF38-208ENST00000488058 VSIG2Q96IQ7 327 aa16.49■□□□□ 0.23
RNF38-208ENST00000488058 C8orf49Q96NF6 230 aa16.49■□□□□ 0.23
RNF38-208ENST00000488058 A0A1W2PRE2 83 aa16.48■□□□□ 0.23
RNF38-208ENST00000488058 GNRH2O43555 120 aa16.48■□□□□ 0.23
RNF38-208ENST00000488058 FLI1Q01543 452 aaPredicted RBP16.48■□□□□ 0.23
RNF38-208ENST00000488058 CYB561D1Q8N8Q1 229 aa16.48■□□□□ 0.23
RNF38-208ENST00000488058 SPXQ9BT56 116 aa16.48■□□□□ 0.23
RNF38-208ENST00000488058 PRSS29PA6NIE9 313 aa16.47■□□□□ 0.23
RNF38-208ENST00000488058 IFNA7P01567 189 aa16.47■□□□□ 0.23
RNF38-208ENST00000488058 KCNRGQ8N5I3 272 aa16.47■□□□□ 0.23
RNF38-208ENST00000488058 SDF2L1Q9HCN8 221 aa16.47■□□□□ 0.23
RNF38-208ENST00000488058 MUC4Q99102 2169 aa16.46■□□□□ 0.23
RNF38-208ENST00000488058 MAP1LC3B2A6NCE7 125 aa16.46■□□□□ 0.23
RNF38-208ENST00000488058 PAX4O43316 350 aa16.46■□□□□ 0.23
RNF38-208ENST00000488058 TYMSP04818 313 aa16.46■□□□□ 0.23
RNF38-208ENST00000488058 ZNF345Q14585 488 aa16.46■□□□□ 0.23
RNF38-208ENST00000488058 TDRG1Q3Y452 100 aa16.46■□□□□ 0.23
RNF38-208ENST00000488058 ZFP69Q49AA0 526 aa16.46■□□□□ 0.23
RNF38-208ENST00000488058 SOHLH1Q5JUK2 328 aa16.46■□□□□ 0.23
RNF38-208ENST00000488058 TMEM75Q8N9X5 138 aa16.46■□□□□ 0.23
RNF38-208ENST00000488058 MAP1LC3BQ9GZQ8 125 aa16.46■□□□□ 0.23
RNF38-208ENST00000488058 A0A096LPF7 62 aa16.45■□□□□ 0.22
RNF38-208ENST00000488058 IGHV3-16A0A0C4DH30 117 aa16.45■□□□□ 0.22
RNF38-208ENST00000488058 NBDYA0A0U1RRE5 68 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms