RNA–Protein interactions for RNA: ENST00000487252.1

TRIM56-204, Transcript of tripartite motif containing 56, humanhuman

TSL 3

Gene TRIM56, Length 735 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-204ENST00000487252 TRGV9Q99603 122 aa8.13□□□□□ -1.11
TRIM56-204ENST00000487252 Q9H3A6 140 aa8.13□□□□□ -1.11
TRIM56-204ENST00000487252 DNAJC4Q9NNZ3 241 aa8.13□□□□□ -1.11
TRIM56-204ENST00000487252 LINC00588Q9Y4M8 146 aa8.13□□□□□ -1.11
TRIM56-204ENST00000487252 URGCP-MRPS24S4R325 110 aa8.13□□□□□ -1.11
TRIM56-204ENST00000487252 TRBV20OR9-2A0A075B6H5 130 aa8.12□□□□□ -1.11
TRIM56-204ENST00000487252 IGKV3-7A0A075B6H7 116 aa8.12□□□□□ -1.11
TRIM56-204ENST00000487252 IGHV3OR16-8A0A075B7F1 116 aa8.12□□□□□ -1.11
TRIM56-204ENST00000487252 TRAV2A0A0B4J234 112 aa8.12□□□□□ -1.11
TRIM56-204ENST00000487252 IGHV7-4-1A0A0J9YVY3 117 aa8.12□□□□□ -1.11
TRIM56-204ENST00000487252 SCO2A0A1W2PP80 73 aa8.12□□□□□ -1.11
TRIM56-204ENST00000487252 A0A1W2PRE2 83 aa8.12□□□□□ -1.11
TRIM56-204ENST00000487252 PPP1R2P9O14990 202 aa8.12□□□□□ -1.11
TRIM56-204ENST00000487252 ZNF207O43670 478 aaKnown RBP8.12□□□□□ -1.11
TRIM56-204ENST00000487252 TYMSP04818 313 aa8.12□□□□□ -1.11
TRIM56-204ENST00000487252 S100A8P05109 93 aa8.12□□□□□ -1.11
TRIM56-204ENST00000487252 S100A6P06703 90 aa8.12□□□□□ -1.11
TRIM56-204ENST00000487252 HOXA5P20719 270 aa8.12□□□□□ -1.11
TRIM56-204ENST00000487252 TTC32Q5I0X7 151 aa8.12□□□□□ -1.11
TRIM56-204ENST00000487252 PATE2Q6UY27 113 aa8.12□□□□□ -1.11
TRIM56-204ENST00000487252 OR1L4Q8NGR5 311 aa8.12□□□□□ -1.11
TRIM56-204ENST00000487252 MRPL36Q9P0J6 103 aaKnown RBP8.12□□□□□ -1.11
TRIM56-204ENST00000487252 TEX48A0A1B0GUV7 120 aa8.11□□□□□ -1.11
TRIM56-204ENST00000487252 A0A1W2PPQ1 181 aa8.11□□□□□ -1.11
TRIM56-204ENST00000487252 TMEM189A5PLL7 270 aa8.11□□□□□ -1.11
TRIM56-204ENST00000487252 ZNF98A6NK75 572 aa8.11□□□□□ -1.11
TRIM56-204ENST00000487252 CORTO00230 105 aa8.11□□□□□ -1.11
TRIM56-204ENST00000487252 REG1AP05451 166 aa8.11□□□□□ -1.11
TRIM56-204ENST00000487252 GATA2P23769 480 aaPredicted RBP8.11□□□□□ -1.11
TRIM56-204ENST00000487252 S100PP25815 95 aa8.11□□□□□ -1.11
TRIM56-204ENST00000487252 RPL35P42766 123 aaKnown RBP8.11□□□□□ -1.11
TRIM56-204ENST00000487252 GALR1P47211 349 aa8.11□□□□□ -1.11
TRIM56-204ENST00000487252 PLP1P60201 277 aa8.11□□□□□ -1.11
TRIM56-204ENST00000487252 PAFAH1B2P68402 229 aa8.11□□□□□ -1.11
TRIM56-204ENST00000487252 HAMPP81172 84 aa8.11□□□□□ -1.11
TRIM56-204ENST00000487252 FABP9Q0Z7S8 132 aa8.11□□□□□ -1.11
TRIM56-204ENST00000487252 TMEM116Q8NCL8 245 aa8.11□□□□□ -1.11
TRIM56-204ENST00000487252 NPIPB3Q92617 1050 aa8.11□□□□□ -1.11
TRIM56-204ENST00000487252 ACY3Q96HD9 319 aa8.11□□□□□ -1.11
TRIM56-204ENST00000487252 ATP6V0BQ99437 205 aa8.11□□□□□ -1.11
TRIM56-204ENST00000487252 PFDN5Q99471 154 aa8.11□□□□□ -1.11
TRIM56-204ENST00000487252 DERL1Q9BUN8 251 aa8.11□□□□□ -1.11
TRIM56-204ENST00000487252 SLC25A2Q9BXI2 301 aa8.11□□□□□ -1.11
TRIM56-204ENST00000487252 Q9H8V8 135 aa8.11□□□□□ -1.11
TRIM56-204ENST00000487252 F11RQ9Y624 299 aaKnown RBP8.11□□□□□ -1.11
TRIM56-204ENST00000487252 PKHD1L1Q86WI1 4243 aa8.11□□□□□ -1.11
TRIM56-204ENST00000487252 OR2T8A6NH00 312 aa8.1□□□□□ -1.11
TRIM56-204ENST00000487252 ZNF705FA8MVS1 300 aaPredicted RBP8.1□□□□□ -1.11
TRIM56-204ENST00000487252 HIST1H2BKO60814 126 aa8.1□□□□□ -1.11
TRIM56-204ENST00000487252 TRGC2P03986 189 aa8.1□□□□□ -1.11
TRIM56-204ENST00000487252 HIST1H2BJP06899 126 aa8.1□□□□□ -1.11
TRIM56-204ENST00000487252 ZNF705DP0CH99 300 aaPredicted RBP8.1□□□□□ -1.11
TRIM56-204ENST00000487252 ZNF705BP0CI00 300 aaPredicted RBP8.1□□□□□ -1.11
TRIM56-204ENST00000487252 HTN3P15516 51 aa8.1□□□□□ -1.11
TRIM56-204ENST00000487252 HIST1H2BOP23527 126 aa8.1□□□□□ -1.11
TRIM56-204ENST00000487252 HIST1H2BBP33778 126 aa8.1□□□□□ -1.11
TRIM56-204ENST00000487252 MEOX2P50222 304 aa8.1□□□□□ -1.11
TRIM56-204ENST00000487252 AKR1D1P51857 326 aa8.1□□□□□ -1.11
TRIM56-204ENST00000487252 HIST1H2BDP58876 126 aa8.1□□□□□ -1.11
TRIM56-204ENST00000487252 HIST1H2BCP62807 126 aa8.1□□□□□ -1.11
TRIM56-204ENST00000487252 HIST2H2BEQ16778 126 aa8.1□□□□□ -1.11
TRIM56-204ENST00000487252 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.1□□□□□ -1.11
TRIM56-204ENST00000487252 ZNF705AQ6ZN79 300 aaPredicted RBP8.1□□□□□ -1.11
TRIM56-204ENST00000487252 OCC1Q8TAD7 63 aa8.1□□□□□ -1.11
TRIM56-204ENST00000487252 VN1R17PQ8TDU5 208 aa8.1□□□□□ -1.11
TRIM56-204ENST00000487252 HIST1H2BHQ93079 126 aa8.1□□□□□ -1.11
TRIM56-204ENST00000487252 BTF3L4Q96K17 158 aa8.1□□□□□ -1.11
TRIM56-204ENST00000487252 HIST1H2BNQ99877 126 aa8.1□□□□□ -1.11
TRIM56-204ENST00000487252 HIST1H2BMQ99879 126 aa8.1□□□□□ -1.11
TRIM56-204ENST00000487252 MS4A6AQ9H2W1 248 aa8.1□□□□□ -1.11
TRIM56-204ENST00000487252 COX7A2P2O60397 106 aa8.09□□□□□ -1.11
TRIM56-204ENST00000487252 PLA2G1BP04054 148 aaKnown RBP8.09□□□□□ -1.11
TRIM56-204ENST00000487252 SMIM6P0DI80 62 aa8.09□□□□□ -1.11
TRIM56-204ENST00000487252 CCL18P55774 89 aa8.09□□□□□ -1.11
TRIM56-204ENST00000487252 FAM222AQ5U5X8 452 aa8.09□□□□□ -1.11
TRIM56-204ENST00000487252 MORN5Q5VZ52 161 aa8.09□□□□□ -1.11
TRIM56-204ENST00000487252 C10orf113Q5VZT2 155 aa8.09□□□□□ -1.11
TRIM56-204ENST00000487252 OR4X1Q8NH49 305 aa8.09□□□□□ -1.11
TRIM56-204ENST00000487252 TCEAL7Q9BRU2 100 aa8.09□□□□□ -1.11
TRIM56-204ENST00000487252 TRAV9-1A0A075B6T8 112 aa8.08□□□□□ -1.12
TRIM56-204ENST00000487252 TRAV5A0A0B4J249 113 aa8.08□□□□□ -1.12
TRIM56-204ENST00000487252 SMIM9A6NGZ8 99 aa8.08□□□□□ -1.12
TRIM56-204ENST00000487252 GGTLC3B5MD39 225 aa8.08□□□□□ -1.12
TRIM56-204ENST00000487252 I3L2K1 104 aa8.08□□□□□ -1.12
TRIM56-204ENST00000487252 OR10J4P0C629 311 aa8.08□□□□□ -1.12
TRIM56-204ENST00000487252 TRGC1P0CF51 173 aa8.08□□□□□ -1.12
TRIM56-204ENST00000487252 ZNF90Q03938 601 aa8.08□□□□□ -1.12
TRIM56-204ENST00000487252 USF2Q15853 346 aaPredicted RBP8.08□□□□□ -1.12
TRIM56-204ENST00000487252 LCE2CQ5TA81 110 aa8.08□□□□□ -1.12
TRIM56-204ENST00000487252 KCNIP4Q6PIL6 250 aa8.08□□□□□ -1.12
TRIM56-204ENST00000487252 TCF24Q7RTU0 167 aa8.08□□□□□ -1.12
TRIM56-204ENST00000487252 STXBP6Q8NFX7 210 aa8.08□□□□□ -1.12
TRIM56-204ENST00000487252 MISP3Q96FF7 219 aa8.08□□□□□ -1.12
TRIM56-204ENST00000487252 SFRP2Q96HF1 295 aa8.08□□□□□ -1.12
TRIM56-204ENST00000487252 TMEM70Q9BUB7 260 aa8.08□□□□□ -1.12
TRIM56-204ENST00000487252 IFITM10A6NMD0 228 aa8.07□□□□□ -1.12
TRIM56-204ENST00000487252 K7EN84 100 aa8.07□□□□□ -1.12
TRIM56-204ENST00000487252 OR7C2O60412 319 aa8.07□□□□□ -1.12
TRIM56-204ENST00000487252 EMP1P54849 157 aa8.07□□□□□ -1.12
TRIM56-204ENST00000487252 NDUFA6P56556 154 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms