RNA–Protein interactions for RNA: ENST00000487245.5

HLA-C-208, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,880 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-208ENST00000487245 PKD1L2Q7Z442 2459 aa20■□□□□ 0.79
HLA-C-208ENST00000487245 PTTG1IPP53801 180 aa20■□□□□ 0.79
HLA-C-208ENST00000487245 IL17RELQ6ZVW7 336 aa20■□□□□ 0.79
HLA-C-208ENST00000487245 B4DSR2 109 aa19.99■□□□□ 0.79
HLA-C-208ENST00000487245 SMKR1H3BMG3 65 aa19.99■□□□□ 0.79
HLA-C-208ENST00000487245 C9orf47Q6ZRZ4 202 aa19.99■□□□□ 0.79
HLA-C-208ENST00000487245 C8orf86Q6ZUL3 223 aa19.99■□□□□ 0.79
HLA-C-208ENST00000487245 C2orf91Q6ZV80 131 aa19.99■□□□□ 0.79
HLA-C-208ENST00000487245 H3BUX3 64 aa19.99■□□□□ 0.79
HLA-C-208ENST00000487245 NDUFA4O00483 81 aa19.99■□□□□ 0.79
HLA-C-208ENST00000487245 GATA3P23771 443 aa19.99■□□□□ 0.79
HLA-C-208ENST00000487245 Q6ZVH6 145 aa19.99■□□□□ 0.79
HLA-C-208ENST00000487245 IFI27L1Q96BM0 104 aa19.99■□□□□ 0.79
HLA-C-208ENST00000487245 MSRB1Q9NZV6 116 aa19.99■□□□□ 0.79
HLA-C-208ENST00000487245 LINC00527Q9UJ94 153 aa19.99■□□□□ 0.79
HLA-C-208ENST00000487245 TAX1BP3O14907 124 aa19.98■□□□□ 0.79
HLA-C-208ENST00000487245 ZNF207O43670 478 aaKnown RBP19.98■□□□□ 0.79
HLA-C-208ENST00000487245 TMEM78Q5T7P6 136 aa19.98■□□□□ 0.79
HLA-C-208ENST00000487245 FGF6P10767 208 aa19.97■□□□□ 0.79
HLA-C-208ENST00000487245 PPIFP30405 207 aaKnown RBP19.97■□□□□ 0.79
HLA-C-208ENST00000487245 LY6EQ16553 131 aa19.97■□□□□ 0.79
HLA-C-208ENST00000487245 NXT2Q9NPJ8 142 aaKnown RBP19.97■□□□□ 0.79
HLA-C-208ENST00000487245 ABCA2Q9BZC7 2435 aa19.97■□□□□ 0.79
HLA-C-208ENST00000487245 IGHV3OR16-13A0A075B7E8 117 aa19.96■□□□□ 0.79
HLA-C-208ENST00000487245 IGHV3-74A0A0B4J1X5 117 aa19.96■□□□□ 0.79
HLA-C-208ENST00000487245 IGKV3D-20A0A0C4DH25 116 aa19.96■□□□□ 0.79
HLA-C-208ENST00000487245 PRSS57Q6UWY2 283 aa19.96■□□□□ 0.79
HLA-C-208ENST00000487245 GLMPQ8WWB7 406 aa19.96■□□□□ 0.79
HLA-C-208ENST00000487245 CD5LO43866 347 aa19.96■□□□□ 0.79
HLA-C-208ENST00000487245 AKAP6Q13023 2319 aa19.96■□□□□ 0.79
HLA-C-208ENST00000487245 IGHV3-49A0A0A0MS15 119 aa19.95■□□□□ 0.78
HLA-C-208ENST00000487245 CACNG7P62955 275 aa19.95■□□□□ 0.78
HLA-C-208ENST00000487245 ANKRD39Q53RE8 183 aa19.95■□□□□ 0.78
HLA-C-208ENST00000487245 C9orf139Q6ZV77 190 aa19.95■□□□□ 0.78
HLA-C-208ENST00000487245 TNFRSF6BO95407 300 aa19.94■□□□□ 0.78
HLA-C-208ENST00000487245 SLC25A16P16260 332 aa19.94■□□□□ 0.78
HLA-C-208ENST00000487245 PSMG4Q5JS54 123 aa19.94■□□□□ 0.78
HLA-C-208ENST00000487245 C16orf92Q96LL3 132 aa19.94■□□□□ 0.78
HLA-C-208ENST00000487245 C11orf21Q9P2W6 132 aa19.94■□□□□ 0.78
HLA-C-208ENST00000487245 LENEPQ9Y5L5 61 aa19.94■□□□□ 0.78
HLA-C-208ENST00000487245 IGHV4-4A0A075B6R2 117 aa19.93■□□□□ 0.78
HLA-C-208ENST00000487245 FCER1GP30273 86 aa19.93■□□□□ 0.78
HLA-C-208ENST00000487245 BOD1L2Q8IYS8 172 aa19.93■□□□□ 0.78
HLA-C-208ENST00000487245 PRSS47A8MTI9 375 aa19.92■□□□□ 0.78
HLA-C-208ENST00000487245 A0A0G2JLM5 398 aa19.92■□□□□ 0.78
HLA-C-208ENST00000487245 SIVA1O15304 175 aa19.91■□□□□ 0.78
HLA-C-208ENST00000487245 ZNF580Q9UK33 172 aa19.91■□□□□ 0.78
HLA-C-208ENST00000487245 IGHV7-4-1A0A0J9YVY3 117 aa19.9■□□□□ 0.78
HLA-C-208ENST00000487245 SEC11AP67812 179 aa19.9■□□□□ 0.78
HLA-C-208ENST00000487245 SNAI2O43623 268 aa19.9■□□□□ 0.78
HLA-C-208ENST00000487245 Q8N8P6 123 aa19.9■□□□□ 0.78
HLA-C-208ENST00000487245 OR9G4Q8NGQ1 327 aa19.9■□□□□ 0.78
HLA-C-208ENST00000487245 PF4V1P10720 104 aa19.89■□□□□ 0.77
HLA-C-208ENST00000487245 FXYD7P58549 80 aa19.89■□□□□ 0.77
HLA-C-208ENST00000487245 TMEM97Q5BJF2 176 aa19.89■□□□□ 0.77
HLA-C-208ENST00000487245 K7EP13 123 aa19.88■□□□□ 0.77
HLA-C-208ENST00000487245 IGLV1-40P01703 118 aa19.88■□□□□ 0.77
HLA-C-208ENST00000487245 IGLV2-18A0A075B6J9 118 aa19.88■□□□□ 0.77
HLA-C-208ENST00000487245 SMAD7O15105 426 aaKnown RBP19.88■□□□□ 0.77
HLA-C-208ENST00000487245 GAS8-AS1O95177 125 aa19.88■□□□□ 0.77
HLA-C-208ENST00000487245 BLCAPP62952 87 aa19.88■□□□□ 0.77
HLA-C-208ENST00000487245 ZMAT4Q9H898 229 aa19.88■□□□□ 0.77
HLA-C-208ENST00000487245 TRBV12-3P01733 135 aa19.87■□□□□ 0.77
HLA-C-208ENST00000487245 LEPP41159 167 aa19.87■□□□□ 0.77
HLA-C-208ENST00000487245 UNQ9165/PRO28630Q6UXU0 137 aa19.87■□□□□ 0.77
HLA-C-208ENST00000487245 SMIM15Q7Z3B0 74 aa19.87■□□□□ 0.77
HLA-C-208ENST00000487245 OR4X2Q8NGF9 303 aa19.87■□□□□ 0.77
HLA-C-208ENST00000487245 LINC00477Q96M19 166 aa19.87■□□□□ 0.77
HLA-C-208ENST00000487245 CACNA1BQ00975 2339 aa19.86■□□□□ 0.77
HLA-C-208ENST00000487245 OVOL1O14753 267 aa19.86■□□□□ 0.77
HLA-C-208ENST00000487245 VAMP3Q15836 100 aa19.86■□□□□ 0.77
HLA-C-208ENST00000487245 LINC01356Q8N9X3 169 aa19.86■□□□□ 0.77
HLA-C-208ENST00000487245 FOXE3Q13461 319 aa19.86■□□□□ 0.77
HLA-C-208ENST00000487245 OR2K2Q8NGT1 345 aa19.86■□□□□ 0.77
HLA-C-208ENST00000487245 KLK15Q9H2R5 256 aa19.85■□□□□ 0.77
HLA-C-208ENST00000487245 J3QLI3 93 aa19.84■□□□□ 0.77
HLA-C-208ENST00000487245 AVPP01185 164 aa19.84■□□□□ 0.77
HLA-C-208ENST00000487245 CFHR3Q02985 330 aa19.84■□□□□ 0.77
HLA-C-208ENST00000487245 NRACQ8N912 160 aa19.84■□□□□ 0.77
HLA-C-208ENST00000487245 IGHV3-11P01762 117 aa19.83■□□□□ 0.76
HLA-C-208ENST00000487245 EVI2AP22794 236 aa19.83■□□□□ 0.76
HLA-C-208ENST00000487245 ODF1Q14990 250 aa19.83■□□□□ 0.76
HLA-C-208ENST00000487245 OR10J6PQ8NGY7 276 aa19.83■□□□□ 0.76
HLA-C-208ENST00000487245 SMPXQ9UHP9 88 aa19.83■□□□□ 0.76
HLA-C-208ENST00000487245 A1L4Q6 167 aa19.82■□□□□ 0.76
HLA-C-208ENST00000487245 SOCS3O14543 225 aa19.82■□□□□ 0.76
HLA-C-208ENST00000487245 GATA1P15976 413 aaPredicted RBP19.82■□□□□ 0.76
HLA-C-208ENST00000487245 HSD52Q0P140 79 aa19.82■□□□□ 0.76
HLA-C-208ENST00000487245 OR4C5Q8NGB2 326 aa19.82■□□□□ 0.76
HLA-C-208ENST00000487245 C20orf173Q96LM9 149 aa19.82■□□□□ 0.76
HLA-C-208ENST00000487245 DKK2Q9UBU2 259 aa19.82■□□□□ 0.76
HLA-C-208ENST00000487245 CBY1Q9Y3M2 126 aa19.82■□□□□ 0.76
HLA-C-208ENST00000487245 USP24Q9UPU5 2620 aa19.82■□□□□ 0.76
HLA-C-208ENST00000487245 PEF1Q9UBV8 284 aaKnown RBP19.82■□□□□ 0.76
HLA-C-208ENST00000487245 ATP5LO75964 103 aa19.81■□□□□ 0.76
HLA-C-208ENST00000487245 GPHB5Q86YW7 130 aa19.81■□□□□ 0.76
HLA-C-208ENST00000487245 DOPEY1Q5JWR5 2465 aa19.8■□□□□ 0.76
HLA-C-208ENST00000487245 COX6B1P14854 86 aa19.8■□□□□ 0.76
HLA-C-208ENST00000487245 Q6ZS46 218 aa19.8■□□□□ 0.76
HLA-C-208ENST00000487245 CBY3A6NI87 242 aa19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms