RNA–Protein interactions for RNA: ENST00000486935.2

SEMA4D-219, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 969 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-219ENST00000486935 NDUFA5Q16718 116 aa11.25□□□□□ -0.61
SEMA4D-219ENST00000486935 TMEM183BQ1AE95 376 aa11.25□□□□□ -0.61
SEMA4D-219ENST00000486935 EIF4E3Q8N5X7 224 aaKnown RBP11.25□□□□□ -0.61
SEMA4D-219ENST00000486935 EPPK1P58107 5090 aaKnown RBP11.25□□□□□ -0.61
SEMA4D-219ENST00000486935 LY6G6CO95867 125 aa11.24□□□□□ -0.61
SEMA4D-219ENST00000486935 CA1P00915 261 aaPredicted RBP11.24□□□□□ -0.61
SEMA4D-219ENST00000486935 S100A9P06702 114 aaKnown RBP11.24□□□□□ -0.61
SEMA4D-219ENST00000486935 CT45A10P0DMU9 189 aa11.24□□□□□ -0.61
SEMA4D-219ENST00000486935 ZNF138P52744 262 aa11.24□□□□□ -0.61
SEMA4D-219ENST00000486935 OR11H2Q8NH07 326 aa11.24□□□□□ -0.61
SEMA4D-219ENST00000486935 LINC00477Q96M19 166 aa11.24□□□□□ -0.61
SEMA4D-219ENST00000486935 ZNF492Q9P255 531 aa11.24□□□□□ -0.61
SEMA4D-219ENST00000486935 KLF12Q9Y4X4 402 aa11.24□□□□□ -0.61
SEMA4D-219ENST00000486935 FBLL1A6NHQ2 334 aaKnown RBP11.23□□□□□ -0.61
SEMA4D-219ENST00000486935 ZNF727A8MUV8 499 aa11.23□□□□□ -0.61
SEMA4D-219ENST00000486935 J3KRW8 73 aa11.23□□□□□ -0.61
SEMA4D-219ENST00000486935 FXYD7P58549 80 aa11.23□□□□□ -0.61
SEMA4D-219ENST00000486935 CENPWQ5EE01 88 aa11.23□□□□□ -0.61
SEMA4D-219ENST00000486935 TRPT1Q86TN4 253 aaKnown RBP11.23□□□□□ -0.61
SEMA4D-219ENST00000486935 NHLRC2Q8NBF2 726 aa11.23□□□□□ -0.61
SEMA4D-219ENST00000486935 SMIM7Q9BQ49 75 aa11.23□□□□□ -0.61
SEMA4D-219ENST00000486935 NDFIP1Q9BT67 221 aa11.23□□□□□ -0.61
SEMA4D-219ENST00000486935 KLK5Q9Y337 293 aaPredicted RBP11.23□□□□□ -0.61
SEMA4D-219ENST00000486935 TRBV6-1A0A0K0K1D8 114 aa11.22□□□□□ -0.61
SEMA4D-219ENST00000486935 GNG4P50150 75 aa11.22□□□□□ -0.61
SEMA4D-219ENST00000486935 TAS2R60P59551 318 aa11.22□□□□□ -0.61
SEMA4D-219ENST00000486935 SOHLH1Q5JUK2 328 aa11.22□□□□□ -0.61
SEMA4D-219ENST00000486935 LINC00476Q8WZB0 136 aa11.22□□□□□ -0.61
SEMA4D-219ENST00000486935 IGF2BP2-AS1Q96M15 143 aa11.22□□□□□ -0.61
SEMA4D-219ENST00000486935 C8orf49Q96NF6 230 aa11.22□□□□□ -0.61
SEMA4D-219ENST00000486935 ALMS1Q8TCU4 4167 aa11.21□□□□□ -0.61
SEMA4D-219ENST00000486935 PGPEP1LA6NFU8 196 aa11.21□□□□□ -0.61
SEMA4D-219ENST00000486935 LTAP01374 205 aa11.21□□□□□ -0.61
SEMA4D-219ENST00000486935 LEPP41159 167 aa11.21□□□□□ -0.61
SEMA4D-219ENST00000486935 SPINK13Q1W4C9 94 aa11.21□□□□□ -0.61
SEMA4D-219ENST00000486935 AMTNQ6UX39 209 aa11.21□□□□□ -0.61
SEMA4D-219ENST00000486935 BAGE2Q86Y30 109 aa11.21□□□□□ -0.61
SEMA4D-219ENST00000486935 PHLDA1Q8WV24 401 aaPredicted RBP11.21□□□□□ -0.61
SEMA4D-219ENST00000486935 TVP23CQ96ET8 276 aa11.21□□□□□ -0.61
SEMA4D-219ENST00000486935 TRBV20OR9-2A0A075B6H5 130 aa11.2□□□□□ -0.62
SEMA4D-219ENST00000486935 TMEM218A2RU14 115 aa11.2□□□□□ -0.62
SEMA4D-219ENST00000486935 A8MTW9 85 aa11.2□□□□□ -0.62
SEMA4D-219ENST00000486935 M0R2Z0 102 aa11.2□□□□□ -0.62
SEMA4D-219ENST00000486935 DEFB4AO15263 64 aa11.2□□□□□ -0.62
SEMA4D-219ENST00000486935 FAM74A3Q4VXF1 159 aa11.2□□□□□ -0.62
SEMA4D-219ENST00000486935 C11orf45Q8TAV5 145 aa11.2□□□□□ -0.62
SEMA4D-219ENST00000486935 ODF3Q96PU9 254 aa11.2□□□□□ -0.62
SEMA4D-219ENST00000486935 C9JCJ5 164 aa11.19□□□□□ -0.62
SEMA4D-219ENST00000486935 F8W036 122 aa11.19□□□□□ -0.62
SEMA4D-219ENST00000486935 MGST1P10620 155 aaKnown RBP11.19□□□□□ -0.62
SEMA4D-219ENST00000486935 TSPOP30536 169 aa11.19□□□□□ -0.62
SEMA4D-219ENST00000486935 NANOS2P60321 138 aaKnown RBP11.19□□□□□ -0.62
SEMA4D-219ENST00000486935 SAPCD1Q5SSQ6 148 aa11.19□□□□□ -0.62
SEMA4D-219ENST00000486935 FAM19A4Q96LR4 140 aa11.19□□□□□ -0.62
SEMA4D-219ENST00000486935 CLUHP3Q96NS8 147 aa11.19□□□□□ -0.62
SEMA4D-219ENST00000486935 ZFP30Q9Y2G7 519 aa11.19□□□□□ -0.62
SEMA4D-219ENST00000486935 TRAV12-2A0A075B6T6 113 aa11.18□□□□□ -0.62
SEMA4D-219ENST00000486935 GPX1P07203 203 aa11.18□□□□□ -0.62
SEMA4D-219ENST00000486935 CRISP2P16562 243 aa11.18□□□□□ -0.62
SEMA4D-219ENST00000486935 ADCYAP1P18509 176 aa11.18□□□□□ -0.62
SEMA4D-219ENST00000486935 KIR3DS1Q14943 382 aa11.18□□□□□ -0.62
SEMA4D-219ENST00000486935 PRR9Q5T870 116 aa11.18□□□□□ -0.62
SEMA4D-219ENST00000486935 TMEM183AQ8IXX5 376 aa11.18□□□□□ -0.62
SEMA4D-219ENST00000486935 ZFAND2AQ8N6M9 145 aa11.18□□□□□ -0.62
SEMA4D-219ENST00000486935 LENEPQ9Y5L5 61 aa11.18□□□□□ -0.62
SEMA4D-219ENST00000486935 TRBV7-9A0A0J9YWB2 115 aa11.17□□□□□ -0.62
SEMA4D-219ENST00000486935 GIG44P09565 113 aaPredicted RBP11.17□□□□□ -0.62
SEMA4D-219ENST00000486935 RNASE4P34096 147 aaKnown RBP11.17□□□□□ -0.62
SEMA4D-219ENST00000486935 CDKN1BP46527 198 aa11.17□□□□□ -0.62
SEMA4D-219ENST00000486935 NUTF2P61970 127 aaKnown RBP11.17□□□□□ -0.62
SEMA4D-219ENST00000486935 BTN1A1Q13410 526 aa11.17□□□□□ -0.62
SEMA4D-219ENST00000486935 TMEM241Q24JQ0 296 aa11.17□□□□□ -0.62
SEMA4D-219ENST00000486935 SMUG1Q53HV7 270 aa11.17□□□□□ -0.62
SEMA4D-219ENST00000486935 MORN3Q6PF18 240 aaPredicted RBP11.17□□□□□ -0.62
SEMA4D-219ENST00000486935 OCC1Q8TAD7 63 aa11.17□□□□□ -0.62
SEMA4D-219ENST00000486935 ZC2HC1AQ96GY0 325 aa11.17□□□□□ -0.62
SEMA4D-219ENST00000486935 NIPSNAP3BQ9BS92 247 aa11.17□□□□□ -0.62
SEMA4D-219ENST00000486935 C11orf68Q9H3H3 251 aaKnown RBP11.17□□□□□ -0.62
SEMA4D-219ENST00000486935 XCL2Q9UBD3 114 aa11.17□□□□□ -0.62
SEMA4D-219ENST00000486935 NAT8Q9UHE5 227 aa11.17□□□□□ -0.62
SEMA4D-219ENST00000486935 GCGP01275 180 aa11.16□□□□□ -0.62
SEMA4D-219ENST00000486935 IGLV2-8P01709 118 aa11.16□□□□□ -0.62
SEMA4D-219ENST00000486935 GFI1BQ5VTD9 330 aa11.16□□□□□ -0.62
SEMA4D-219ENST00000486935 PRR27Q6MZM9 219 aa11.16□□□□□ -0.62
SEMA4D-219ENST00000486935 BIRC6Q9NR09 4857 aa11.15□□□□□ -0.62
SEMA4D-219ENST00000486935 C7orf71A4D174 169 aa11.15□□□□□ -0.62
SEMA4D-219ENST00000486935 KLLNB2CW77 178 aa11.15□□□□□ -0.62
SEMA4D-219ENST00000486935 AMBPP02760 352 aa11.15□□□□□ -0.62
SEMA4D-219ENST00000486935 ZNF80P51504 273 aaPredicted RBP11.15□□□□□ -0.62
SEMA4D-219ENST00000486935 OR5I1Q13606 314 aa11.15□□□□□ -0.62
SEMA4D-219ENST00000486935 ADIRFQ15847 76 aa11.15□□□□□ -0.62
SEMA4D-219ENST00000486935 SMIM12Q96EX1 92 aa11.15□□□□□ -0.62
SEMA4D-219ENST00000486935 MLST8Q9BVC4 326 aa11.15□□□□□ -0.62
SEMA4D-219ENST00000486935 SEC11CQ9BY50 192 aa11.15□□□□□ -0.62
SEMA4D-219ENST00000486935 TRAV12-3A0A0B4J271 114 aa11.14□□□□□ -0.63
SEMA4D-219ENST00000486935 K7EN84 100 aa11.14□□□□□ -0.63
SEMA4D-219ENST00000486935 CRXO43186 299 aaPredicted RBP11.14□□□□□ -0.63
SEMA4D-219ENST00000486935 INSP01308 110 aa11.14□□□□□ -0.63
SEMA4D-219ENST00000486935 RPL23P62829 140 aaKnown RBP11.14□□□□□ -0.63
SEMA4D-219ENST00000486935 LINC01551Q86U37 167 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms