RNA–Protein interactions for RNA: ENST00000486665.5

HDAC6-229, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-229ENST00000486665 Q6ZQT7 251 aa9.32□□□□□ -0.92
HDAC6-229ENST00000486665 BAGE2Q86Y30 109 aa9.32□□□□□ -0.92
HDAC6-229ENST00000486665 KIR2DL5AQ8N109 375 aa9.32□□□□□ -0.92
HDAC6-229ENST00000486665 KIR2DL5BQ8NHK3 375 aa9.32□□□□□ -0.92
HDAC6-229ENST00000486665 IGF2BP2-AS1Q96M15 143 aa9.32□□□□□ -0.92
HDAC6-229ENST00000486665 PARLQ9H300 379 aa9.32□□□□□ -0.92
HDAC6-229ENST00000486665 LENEPQ9Y5L5 61 aa9.32□□□□□ -0.92
HDAC6-229ENST00000486665 TRBV20OR9-2A0A075B6H5 130 aa9.31□□□□□ -0.92
HDAC6-229ENST00000486665 TRBV7-9A0A0J9YWB2 115 aa9.31□□□□□ -0.92
HDAC6-229ENST00000486665 KLLNB2CW77 178 aa9.31□□□□□ -0.92
HDAC6-229ENST00000486665 IGLV2-8P01709 118 aa9.31□□□□□ -0.92
HDAC6-229ENST00000486665 TSPOP30536 169 aa9.31□□□□□ -0.92
HDAC6-229ENST00000486665 RNASE4P34096 147 aaKnown RBP9.31□□□□□ -0.92
HDAC6-229ENST00000486665 CDKN1BP46527 198 aa9.31□□□□□ -0.92
HDAC6-229ENST00000486665 ZNF80P51504 273 aaPredicted RBP9.31□□□□□ -0.92
HDAC6-229ENST00000486665 APOC4P55056 127 aa9.31□□□□□ -0.92
HDAC6-229ENST00000486665 BTN1A1Q13410 526 aa9.31□□□□□ -0.92
HDAC6-229ENST00000486665 CENPWQ5EE01 88 aa9.31□□□□□ -0.92
HDAC6-229ENST00000486665 SAPCD1Q5SSQ6 148 aa9.31□□□□□ -0.92
HDAC6-229ENST00000486665 GFI1BQ5VTD9 330 aa9.31□□□□□ -0.92
HDAC6-229ENST00000486665 EIF4E3Q8N5X7 224 aaKnown RBP9.31□□□□□ -0.92
HDAC6-229ENST00000486665 NHLRC2Q8NBF2 726 aa9.31□□□□□ -0.92
HDAC6-229ENST00000486665 CSNK1G2-AS1Q8NCQ2 148 aa9.31□□□□□ -0.92
HDAC6-229ENST00000486665 MLST8Q9BVC4 326 aa9.31□□□□□ -0.92
HDAC6-229ENST00000486665 ZFP30Q9Y2G7 519 aa9.31□□□□□ -0.92
HDAC6-229ENST00000486665 STARD9Q9P2P6 4700 aa9.31□□□□□ -0.92
HDAC6-229ENST00000486665 PGPEP1LA6NFU8 196 aa9.3□□□□□ -0.92
HDAC6-229ENST00000486665 GPX1P07203 203 aa9.3□□□□□ -0.92
HDAC6-229ENST00000486665 RBMY1A1P0DJD3 496 aaKnown RBP9.3□□□□□ -0.92
HDAC6-229ENST00000486665 RBMY1CP0DJD4 496 aa9.3□□□□□ -0.92
HDAC6-229ENST00000486665 CRIP1P50238 77 aa9.3□□□□□ -0.92
HDAC6-229ENST00000486665 NUTF2P61970 127 aaKnown RBP9.3□□□□□ -0.92
HDAC6-229ENST00000486665 RBMY1FQ15415 496 aaKnown RBP9.3□□□□□ -0.92
HDAC6-229ENST00000486665 UQCC3Q6UW78 93 aa9.3□□□□□ -0.92
HDAC6-229ENST00000486665 SBSPONQ8IVN8 264 aa9.3□□□□□ -0.92
HDAC6-229ENST00000486665 TMEM183AQ8IXX5 376 aa9.3□□□□□ -0.92
HDAC6-229ENST00000486665 NDFIP1Q9BT67 221 aa9.3□□□□□ -0.92
HDAC6-229ENST00000486665 TRAV12-3A0A0B4J271 114 aa9.29□□□□□ -0.92
HDAC6-229ENST00000486665 ZNF727A8MUV8 499 aa9.29□□□□□ -0.92
HDAC6-229ENST00000486665 ZNF324O75467 553 aaPredicted RBP9.29□□□□□ -0.92
HDAC6-229ENST00000486665 AMBPP02760 352 aa9.29□□□□□ -0.92
HDAC6-229ENST00000486665 SFTA3P0C7M3 94 aa9.29□□□□□ -0.92
HDAC6-229ENST00000486665 NHLRC4P0CG21 123 aaPredicted RBP9.29□□□□□ -0.92
HDAC6-229ENST00000486665 GNG4P50150 75 aa9.29□□□□□ -0.92
HDAC6-229ENST00000486665 SMUG1Q53HV7 270 aa9.29□□□□□ -0.92
HDAC6-229ENST00000486665 COX8CQ7Z4L0 72 aa9.29□□□□□ -0.92
HDAC6-229ENST00000486665 SLC7A5P1Q8MH63 180 aa9.29□□□□□ -0.92
HDAC6-229ENST00000486665 C1orf158Q8N1D5 194 aa9.29□□□□□ -0.92
HDAC6-229ENST00000486665 OCC1Q8TAD7 63 aa9.29□□□□□ -0.92
HDAC6-229ENST00000486665 ZC2HC1AQ96GY0 325 aa9.29□□□□□ -0.92
HDAC6-229ENST00000486665 SMIM7Q9BQ49 75 aa9.29□□□□□ -0.92
HDAC6-229ENST00000486665 C7orf71A4D174 169 aa9.28□□□□□ -0.92
HDAC6-229ENST00000486665 C9JCJ5 164 aa9.28□□□□□ -0.92
HDAC6-229ENST00000486665 UBE2CO00762 179 aa9.28□□□□□ -0.92
HDAC6-229ENST00000486665 GCGP01275 180 aa9.28□□□□□ -0.92
HDAC6-229ENST00000486665 SOHLH1Q5JUK2 328 aa9.28□□□□□ -0.92
HDAC6-229ENST00000486665 TMEM218A2RU14 115 aa9.27□□□□□ -0.93
HDAC6-229ENST00000486665 INSP01308 110 aa9.27□□□□□ -0.93
HDAC6-229ENST00000486665 PRM2P04554 102 aa9.27□□□□□ -0.93
HDAC6-229ENST00000486665 DEFB135Q30KP9 77 aa9.27□□□□□ -0.93
HDAC6-229ENST00000486665 FAM74A3Q4VXF1 159 aa9.27□□□□□ -0.93
HDAC6-229ENST00000486665 C1QTNF4Q9BXJ3 329 aa9.27□□□□□ -0.93
HDAC6-229ENST00000486665 RETNQ9HD89 108 aa9.27□□□□□ -0.93
HDAC6-229ENST00000486665 BIRC6Q9NR09 4857 aa9.27□□□□□ -0.93
HDAC6-229ENST00000486665 C3orf84H3BNL1 204 aa9.26□□□□□ -0.93
HDAC6-229ENST00000486665 K7EN84 100 aa9.26□□□□□ -0.93
HDAC6-229ENST00000486665 MGST1P10620 155 aaKnown RBP9.26□□□□□ -0.93
HDAC6-229ENST00000486665 OR5I1Q13606 314 aa9.26□□□□□ -0.93
HDAC6-229ENST00000486665 TMEM241Q24JQ0 296 aa9.26□□□□□ -0.93
HDAC6-229ENST00000486665 CASC10Q5T4H9 136 aa9.26□□□□□ -0.93
HDAC6-229ENST00000486665 Q6AWC8 147 aa9.26□□□□□ -0.93
HDAC6-229ENST00000486665 Q6ZWC4 215 aa9.26□□□□□ -0.93
HDAC6-229ENST00000486665 RNF183Q96D59 192 aa9.26□□□□□ -0.93
HDAC6-229ENST00000486665 LINC01587Q99440 93 aa9.26□□□□□ -0.93
HDAC6-229ENST00000486665 C11orf21Q9P2W6 132 aa9.26□□□□□ -0.93
HDAC6-229ENST00000486665 IGHV3OR16-12A0A075B7B8 117 aa9.25□□□□□ -0.93
HDAC6-229ENST00000486665 TRAV21A0A0B4J279 112 aa9.25□□□□□ -0.93
HDAC6-229ENST00000486665 SH2D1AO60880 128 aa9.25□□□□□ -0.93
HDAC6-229ENST00000486665 ADCYAP1P18509 176 aa9.25□□□□□ -0.93
HDAC6-229ENST00000486665 PRR27Q6MZM9 219 aa9.25□□□□□ -0.93
HDAC6-229ENST00000486665 ZNF705AQ6ZN79 300 aaPredicted RBP9.25□□□□□ -0.93
HDAC6-229ENST00000486665 RCHY1Q96PM5 261 aa9.25□□□□□ -0.93
HDAC6-229ENST00000486665 OVOL2Q9BRP0 275 aa9.25□□□□□ -0.93
HDAC6-229ENST00000486665 GOLT1BQ9Y3E0 138 aa9.25□□□□□ -0.93
HDAC6-229ENST00000486665 LY96Q9Y6Y9 160 aa9.25□□□□□ -0.93
HDAC6-229ENST00000486665 FABP5P3A8MUU1 101 aa9.24□□□□□ -0.93
HDAC6-229ENST00000486665 ZNF705GA8MUZ8 300 aaPredicted RBP9.24□□□□□ -0.93
HDAC6-229ENST00000486665 SPRY2O43597 315 aa9.24□□□□□ -0.93
HDAC6-229ENST00000486665 PFN1P07737 140 aaKnown RBP9.24□□□□□ -0.93
HDAC6-229ENST00000486665 RPL23P62829 140 aaKnown RBP9.24□□□□□ -0.93
HDAC6-229ENST00000486665 MUC21Q5SSG8 566 aa9.24□□□□□ -0.93
HDAC6-229ENST00000486665 FAM162BQ5T6X4 162 aa9.24□□□□□ -0.93
HDAC6-229ENST00000486665 LINC01551Q86U37 167 aa9.24□□□□□ -0.93
HDAC6-229ENST00000486665 SMIM12Q96EX1 92 aa9.24□□□□□ -0.93
HDAC6-229ENST00000486665 C20orf144Q9BQM9 153 aa9.24□□□□□ -0.93
HDAC6-229ENST00000486665 TM2D3Q9BRN9 247 aa9.24□□□□□ -0.93
HDAC6-229ENST00000486665 NIPSNAP3BQ9BS92 247 aa9.24□□□□□ -0.93
HDAC6-229ENST00000486665 SDF2L1Q9HCN8 221 aa9.24□□□□□ -0.93
HDAC6-229ENST00000486665 NAT8Q9UHE5 227 aa9.24□□□□□ -0.93
HDAC6-229ENST00000486665 X6R8D5 127 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms