RNA–Protein interactions for RNA: ENST00000486572.1

COL1A1-207, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 836 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-207ENST00000486572 RYR2Q92736 4967 aa12.91□□□□□ -0.34
COL1A1-207ENST00000486572 PLECQ15149 4684 aaKnown RBP12.9□□□□□ -0.34
COL1A1-207ENST00000486572 hCG_2014768A0A024R1R8 64 aa12.9□□□□□ -0.34
COL1A1-207ENST00000486572 TRAV8-1A0A0A6YYK1 113 aa12.9□□□□□ -0.34
COL1A1-207ENST00000486572 CBY3A6NI87 242 aa12.9□□□□□ -0.34
COL1A1-207ENST00000486572 UMAD1C9J7I0 102 aa12.9□□□□□ -0.34
COL1A1-207ENST00000486572 RGS13O14921 159 aa12.9□□□□□ -0.34
COL1A1-207ENST00000486572 SUMO1P63165 101 aaKnown RBP12.9□□□□□ -0.34
COL1A1-207ENST00000486572 ANXA2RQ3ZCQ2 193 aa12.9□□□□□ -0.34
COL1A1-207ENST00000486572 LGALS9CQ6DKI2 356 aa12.9□□□□□ -0.34
COL1A1-207ENST00000486572 FAM210BQ96KR6 192 aa12.9□□□□□ -0.34
COL1A1-207ENST00000486572 NDUFAF3Q9BU61 184 aa12.9□□□□□ -0.34
COL1A1-207ENST00000486572 TMPRSS5Q9H3S3 457 aa12.9□□□□□ -0.34
COL1A1-207ENST00000486572 ALMS1Q8TCU4 4167 aa12.9□□□□□ -0.34
COL1A1-207ENST00000486572 K7EQM0 130 aa12.89□□□□□ -0.35
COL1A1-207ENST00000486572 C1QBP02746 253 aa12.89□□□□□ -0.35
COL1A1-207ENST00000486572 TPT1P13693 172 aaKnown RBP12.89□□□□□ -0.35
COL1A1-207ENST00000486572 FHITP49789 147 aa12.89□□□□□ -0.35
COL1A1-207ENST00000486572 Q6ZQT7 251 aa12.89□□□□□ -0.35
COL1A1-207ENST00000486572 AKAP14Q86UN6 197 aa12.89□□□□□ -0.35
COL1A1-207ENST00000486572 EPDR1Q9UM22 224 aa12.89□□□□□ -0.35
COL1A1-207ENST00000486572 SACSQ9NZJ4 4579 aa12.89□□□□□ -0.35
COL1A1-207ENST00000486572 IGHV1OR15-1A0A075B7D0 117 aa12.88□□□□□ -0.35
COL1A1-207ENST00000486572 UBE2G2P60604 165 aa12.88□□□□□ -0.35
COL1A1-207ENST00000486572 Q6AWC8 147 aa12.88□□□□□ -0.35
COL1A1-207ENST00000486572 CYB561D1Q8N8Q1 229 aa12.88□□□□□ -0.35
COL1A1-207ENST00000486572 C11orf72Q8NBR9 251 aa12.88□□□□□ -0.35
COL1A1-207ENST00000486572 STOML3Q8TAV4 291 aa12.88□□□□□ -0.35
COL1A1-207ENST00000486572 ATP5G1P05496 136 aa12.87□□□□□ -0.35
COL1A1-207ENST00000486572 ATP5G3P48201 142 aa12.87□□□□□ -0.35
COL1A1-207ENST00000486572 DAZ2Q13117 558 aaKnown RBP12.87□□□□□ -0.35
COL1A1-207ENST00000486572 LGALSLQ3ZCW2 172 aaPredicted RBP12.87□□□□□ -0.35
COL1A1-207ENST00000486572 LINC00612Q8N6U2 182 aa12.87□□□□□ -0.35
COL1A1-207ENST00000486572 FAM213BQ8TBF2 198 aa12.87□□□□□ -0.35
COL1A1-207ENST00000486572 ATG101Q9BSB4 218 aa12.87□□□□□ -0.35
COL1A1-207ENST00000486572 NDFIP1Q9BT67 221 aa12.87□□□□□ -0.35
COL1A1-207ENST00000486572 NKX6-2Q9C056 277 aaPredicted RBP12.87□□□□□ -0.35
COL1A1-207ENST00000486572 TREM1Q9NP99 234 aa12.87□□□□□ -0.35
COL1A1-207ENST00000486572 GSN-AS1Q9NRJ2 163 aa12.87□□□□□ -0.35
COL1A1-207ENST00000486572 FAM74A7A6NL05 159 aa12.86□□□□□ -0.35
COL1A1-207ENST00000486572 IBA57Q5T440 356 aaKnown RBP12.86□□□□□ -0.35
COL1A1-207ENST00000486572 DPPA3Q6W0C5 159 aa12.86□□□□□ -0.35
COL1A1-207ENST00000486572 TVP23CQ96ET8 276 aa12.86□□□□□ -0.35
COL1A1-207ENST00000486572 SGK494Q96LW2 274 aa12.86□□□□□ -0.35
COL1A1-207ENST00000486572 GAGE12BA1L429 117 aa12.85□□□□□ -0.35
COL1A1-207ENST00000486572 FBLL1A6NHQ2 334 aaKnown RBP12.85□□□□□ -0.35
COL1A1-207ENST00000486572 F6UZH7 168 aa12.85□□□□□ -0.35
COL1A1-207ENST00000486572 GAGE7O76087 117 aa12.85□□□□□ -0.35
COL1A1-207ENST00000486572 IFNA7P01567 189 aa12.85□□□□□ -0.35
COL1A1-207ENST00000486572 GAGE12FP0CL80 117 aa12.85□□□□□ -0.35
COL1A1-207ENST00000486572 GAGE12GP0CL81 117 aa12.85□□□□□ -0.35
COL1A1-207ENST00000486572 GAGE12IP0CL82 117 aa12.85□□□□□ -0.35
COL1A1-207ENST00000486572 TCL1AP56279 114 aa12.85□□□□□ -0.35
COL1A1-207ENST00000486572 MUC21Q5SSG8 566 aa12.85□□□□□ -0.35
COL1A1-207ENST00000486572 TMEM88Q6PEY1 159 aa12.85□□□□□ -0.35
COL1A1-207ENST00000486572 TMEM75Q8N9X5 138 aa12.85□□□□□ -0.35
COL1A1-207ENST00000486572 TP53TG3Q9ULZ0 132 aa12.85□□□□□ -0.35
COL1A1-207ENST00000486572 PSG8Q9UQ74 426 aa12.85□□□□□ -0.35
COL1A1-207ENST00000486572 F5H768 121 aa12.84□□□□□ -0.35
COL1A1-207ENST00000486572 IGLV2-11P01706 119 aa12.84□□□□□ -0.35
COL1A1-207ENST00000486572 FLI1Q01543 452 aaPredicted RBP12.84□□□□□ -0.35
COL1A1-207ENST00000486572 FAM159AQ6UWV7 190 aa12.84□□□□□ -0.35
COL1A1-207ENST00000486572 SFT2D1Q8WV19 159 aa12.84□□□□□ -0.35
COL1A1-207ENST00000486572 MBD3L1Q8WWY6 194 aa12.84□□□□□ -0.35
COL1A1-207ENST00000486572 TRAV21A0A0B4J279 112 aa12.83□□□□□ -0.36
COL1A1-207ENST00000486572 PEX7O00628 323 aa12.83□□□□□ -0.36
COL1A1-207ENST00000486572 ZNF415Q09FC8 603 aa12.83□□□□□ -0.36
COL1A1-207ENST00000486572 EIF5AL1Q6IS14 154 aaKnown RBP12.83□□□□□ -0.36
COL1A1-207ENST00000486572 Q6ZTI0 123 aa12.83□□□□□ -0.36
COL1A1-207ENST00000486572 KLF12Q9Y4X4 402 aa12.83□□□□□ -0.36
COL1A1-207ENST00000486572 ARL2-SNX15V9GYD0 113 aa12.83□□□□□ -0.36
COL1A1-207ENST00000486572 DNAH1Q9P2D7 4330 aa12.82□□□□□ -0.36
COL1A1-207ENST00000486572 PPT1P50897 306 aa12.82□□□□□ -0.36
COL1A1-207ENST00000486572 TDRG1Q3Y452 100 aa12.82□□□□□ -0.36
COL1A1-207ENST00000486572 ZFP69Q49AA0 526 aa12.82□□□□□ -0.36
COL1A1-207ENST00000486572 PRNTQ86SH4 94 aa12.82□□□□□ -0.36
COL1A1-207ENST00000486572 HIST1H2BAQ96A08 127 aa12.82□□□□□ -0.36
COL1A1-207ENST00000486572 NAGKQ9UJ70 344 aa12.82□□□□□ -0.36
COL1A1-207ENST00000486572 TRGV11A0A075B6L2 103 aa12.81□□□□□ -0.36
COL1A1-207ENST00000486572 TRGV1A0A0A0MS02 117 aa12.81□□□□□ -0.36
COL1A1-207ENST00000486572 SPINK4O60575 86 aa12.81□□□□□ -0.36
COL1A1-207ENST00000486572 H2AFB1P0C5Y9 115 aa12.81□□□□□ -0.36
COL1A1-207ENST00000486572 P0DMU3 169 aa12.81□□□□□ -0.36
COL1A1-207ENST00000486572 FAM231AP0DMU4 169 aa12.81□□□□□ -0.36
COL1A1-207ENST00000486572 FAM231CP0DMU5 169 aa12.81□□□□□ -0.36
COL1A1-207ENST00000486572 TMEM183BQ1AE95 376 aa12.81□□□□□ -0.36
COL1A1-207ENST00000486572 SAPCD1Q5SSQ6 148 aa12.81□□□□□ -0.36
COL1A1-207ENST00000486572 CST9LP1Q5W188 147 aa12.81□□□□□ -0.36
COL1A1-207ENST00000486572 TMEM183AQ8IXX5 376 aa12.81□□□□□ -0.36
COL1A1-207ENST00000486572 C15orf53Q8NAA6 179 aa12.81□□□□□ -0.36
COL1A1-207ENST00000486572 C8orf49Q96NF6 230 aa12.81□□□□□ -0.36
COL1A1-207ENST00000486572 TCEAL7Q9BRU2 100 aa12.81□□□□□ -0.36
COL1A1-207ENST00000486572 A0A1B0GV50 99 aa12.8□□□□□ -0.36
COL1A1-207ENST00000486572 RAB5CP51148 216 aa12.8□□□□□ -0.36
COL1A1-207ENST00000486572 SLC51BQ86UW2 128 aa12.8□□□□□ -0.36
COL1A1-207ENST00000486572 LINC00479Q96M42 142 aa12.8□□□□□ -0.36
COL1A1-207ENST00000486572 C18orf15Q96N68 181 aa12.8□□□□□ -0.36
COL1A1-207ENST00000486572 TRGV2A0A075B6R0 118 aa12.79□□□□□ -0.36
COL1A1-207ENST00000486572 TRAV34A0A0B4J273 112 aa12.79□□□□□ -0.36
COL1A1-207ENST00000486572 PAGE4O60829 102 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms