RNA–Protein interactions for RNA: ENST00000485749.1

RTN4-213, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 832 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-213ENST00000485749 DIRC1Q969H9 104 aa3.26□□□□□ -1.89
RTN4-213ENST00000485749 MUCL1Q96DR8 90 aa3.26□□□□□ -1.89
RTN4-213ENST00000485749 DPH3P1Q9H4G8 78 aa3.26□□□□□ -1.89
RTN4-213ENST00000485749 KLK5Q9Y337 293 aaPredicted RBP3.26□□□□□ -1.89
RTN4-213ENST00000485749 LCTP09848 1927 aa3.26□□□□□ -1.89
RTN4-213ENST00000485749 COL11A1P12107 1806 aaPredicted RBP3.26□□□□□ -1.89
RTN4-213ENST00000485749 ANKRD36A6QL64 1941 aa3.25□□□□□ -1.89
RTN4-213ENST00000485749 TMEM131Q92545 1883 aa3.25□□□□□ -1.89
RTN4-213ENST00000485749 MUC21A0A140T8X8 626 aa3.25□□□□□ -1.89
RTN4-213ENST00000485749 UMAD1C9J7I0 102 aa3.25□□□□□ -1.89
RTN4-213ENST00000485749 H3BUT2 72 aa3.25□□□□□ -1.89
RTN4-213ENST00000485749 TCL1BO95988 128 aa3.25□□□□□ -1.89
RTN4-213ENST00000485749 ZNF883P0CG24 379 aa3.25□□□□□ -1.89
RTN4-213ENST00000485749 CKS2P33552 79 aa3.25□□□□□ -1.89
RTN4-213ENST00000485749 RNASE4P34096 147 aaKnown RBP3.25□□□□□ -1.89
RTN4-213ENST00000485749 CAV3P56539 151 aa3.25□□□□□ -1.89
RTN4-213ENST00000485749 ZNF791Q3KP31 576 aaPredicted RBP3.25□□□□□ -1.89
RTN4-213ENST00000485749 ETDBQ3ZM63 59 aa3.25□□□□□ -1.89
RTN4-213ENST00000485749 SCGB3A1Q96QR1 104 aa3.25□□□□□ -1.89
RTN4-213ENST00000485749 CAMK2N2Q96S95 79 aa3.25□□□□□ -1.89
RTN4-213ENST00000485749 CHCHD5Q9BSY4 110 aa3.25□□□□□ -1.89
RTN4-213ENST00000485749 SND1-IT1Q9HBX3 110 aa3.25□□□□□ -1.89
RTN4-213ENST00000485749 XAGE1AQ9HD64 81 aa3.25□□□□□ -1.89
RTN4-213ENST00000485749 DEC1Q9P2X7 70 aa3.25□□□□□ -1.89
RTN4-213ENST00000485749 ZFC3H1O60293 1989 aaKnown RBP3.25□□□□□ -1.89
RTN4-213ENST00000485749 TRBV24-1A0A075B6N3 115 aa3.24□□□□□ -1.89
RTN4-213ENST00000485749 IGHV3OR15-7A0A075B7D8 119 aa3.24□□□□□ -1.89
RTN4-213ENST00000485749 C17orf112F2Z3M2 114 aa3.24□□□□□ -1.89
RTN4-213ENST00000485749 SYS1-DBNDD2H3BUS1 97 aa3.24□□□□□ -1.89
RTN4-213ENST00000485749 K7ERS5 55 aa3.24□□□□□ -1.89
RTN4-213ENST00000485749 HMGN4O00479 90 aa3.24□□□□□ -1.89
RTN4-213ENST00000485749 LEPROTO15243 131 aa3.24□□□□□ -1.89
RTN4-213ENST00000485749 SAA1P0DJI8 122 aaPredicted RBP3.24□□□□□ -1.89
RTN4-213ENST00000485749 CD28P10747 220 aa3.24□□□□□ -1.89
RTN4-213ENST00000485749 SSR2P43308 183 aa3.24□□□□□ -1.89
RTN4-213ENST00000485749 SPINT3P49223 89 aa3.24□□□□□ -1.89
RTN4-213ENST00000485749 CCL8P80075 99 aa3.24□□□□□ -1.89
RTN4-213ENST00000485749 ZNF345Q14585 488 aa3.24□□□□□ -1.89
RTN4-213ENST00000485749 C9orf66Q5T8R8 295 aa3.24□□□□□ -1.89
RTN4-213ENST00000485749 CEMP1Q6PRD7 247 aaPredicted RBP3.24□□□□□ -1.89
RTN4-213ENST00000485749 SOSTDC1Q6X4U4 206 aa3.24□□□□□ -1.89
RTN4-213ENST00000485749 C5orf38Q86SI9 138 aa3.24□□□□□ -1.89
RTN4-213ENST00000485749 C18orf32Q8TCD1 76 aa3.24□□□□□ -1.89
RTN4-213ENST00000485749 ITLN1Q8WWA0 313 aa3.24□□□□□ -1.89
RTN4-213ENST00000485749 ITLN2Q8WWU7 325 aaPredicted RBP3.24□□□□□ -1.89
RTN4-213ENST00000485749 RNASE6Q93091 150 aaKnown RBP3.24□□□□□ -1.89
RTN4-213ENST00000485749 FGF22Q9HCT0 170 aa3.24□□□□□ -1.89
RTN4-213ENST00000485749 CELA1Q9UNI1 258 aa3.24□□□□□ -1.89
RTN4-213ENST00000485749 CITO14578 2027 aa3.24□□□□□ -1.89
RTN4-213ENST00000485749 SCN1AP35498 2009 aa3.24□□□□□ -1.89
RTN4-213ENST00000485749 ATG2AQ2TAZ0 1938 aa3.23□□□□□ -1.89
RTN4-213ENST00000485749 FXYD6-FXYD2A0A087WZ82 144 aa3.23□□□□□ -1.89
RTN4-213ENST00000485749 A0A087X002 238 aa3.23□□□□□ -1.89
RTN4-213ENST00000485749 IGKV1-12A0A0C4DH73 117 aa3.23□□□□□ -1.89
RTN4-213ENST00000485749 J3QRE1 110 aa3.23□□□□□ -1.89
RTN4-213ENST00000485749 IGKV1D-12P01611 117 aa3.23□□□□□ -1.89
RTN4-213ENST00000485749 IGLV1-44P01699 117 aa3.23□□□□□ -1.89
RTN4-213ENST00000485749 IGLV2-11P01706 119 aa3.23□□□□□ -1.89
RTN4-213ENST00000485749 IGHV3-11P01762 117 aa3.23□□□□□ -1.89
RTN4-213ENST00000485749 CD52P31358 61 aa3.23□□□□□ -1.89
RTN4-213ENST00000485749 SSBP1Q04837 148 aaKnown RBP3.23□□□□□ -1.89
RTN4-213ENST00000485749 EGFEM1PQ0D2K5 195 aa3.23□□□□□ -1.89
RTN4-213ENST00000485749 FUT5Q11128 374 aa3.23□□□□□ -1.89
RTN4-213ENST00000485749 ELOBQ15370 118 aa3.23□□□□□ -1.89
RTN4-213ENST00000485749 SS18Q15532 418 aa3.23□□□□□ -1.89
RTN4-213ENST00000485749 FAM78AQ5JUQ0 283 aa3.23□□□□□ -1.89
RTN4-213ENST00000485749 CHCHD2P9Q5T1J5 151 aaPredicted RBP3.23□□□□□ -1.89
RTN4-213ENST00000485749 CASC10Q5T4H9 136 aa3.23□□□□□ -1.89
RTN4-213ENST00000485749 OR8B3Q8NGG8 313 aa3.23□□□□□ -1.89
RTN4-213ENST00000485749 CMTM2Q8TAZ6 248 aa3.23□□□□□ -1.89
RTN4-213ENST00000485749 MYOZ3Q8TDC0 251 aa3.23□□□□□ -1.89
RTN4-213ENST00000485749 FGF13Q92913 245 aa3.23□□□□□ -1.89
RTN4-213ENST00000485749 FAM104AQ969W3 186 aa3.23□□□□□ -1.89
RTN4-213ENST00000485749 WDR90Q96KV7 1748 aa3.23□□□□□ -1.89
RTN4-213ENST00000485749 LINC00479Q96M42 142 aa3.23□□□□□ -1.89
RTN4-213ENST00000485749 FGF23Q9GZV9 251 aaPredicted RBP3.23□□□□□ -1.89
RTN4-213ENST00000485749 FXYD6Q9H0Q3 95 aa3.23□□□□□ -1.89
RTN4-213ENST00000485749 NYNRINQ9P2P1 1898 aaKnown RBP3.23□□□□□ -1.89
RTN4-213ENST00000485749 HHLA3Q9XRX5 114 aa3.23□□□□□ -1.89
RTN4-213ENST00000485749 PATJQ8NI35 1801 aa3.22□□□□□ -1.89
RTN4-213ENST00000485749 IGLV8-61A0A075B6I0 122 aa3.22□□□□□ -1.89
RTN4-213ENST00000485749 TRAV2A0A0B4J234 112 aa3.22□□□□□ -1.89
RTN4-213ENST00000485749 IGHV3-16A0A0C4DH30 117 aa3.22□□□□□ -1.89
RTN4-213ENST00000485749 A0A0J9YXY3 114 aa3.22□□□□□ -1.89
RTN4-213ENST00000485749 hADV29S1A0JD25 119 aa3.22□□□□□ -1.89
RTN4-213ENST00000485749 J3QLW9 94 aa3.22□□□□□ -1.89
RTN4-213ENST00000485749 IGKV1-39P01597 117 aa3.22□□□□□ -1.89
RTN4-213ENST00000485749 IGHV3-7P01780 117 aa3.22□□□□□ -1.89
RTN4-213ENST00000485749 IGKV1D-39P04432 117 aa3.22□□□□□ -1.89
RTN4-213ENST00000485749 NPPCP23582 126 aa3.22□□□□□ -1.89
RTN4-213ENST00000485749 FXYD7P58549 80 aa3.22□□□□□ -1.89
RTN4-213ENST00000485749 RPL36AP83881 106 aaKnown RBP3.22□□□□□ -1.89
RTN4-213ENST00000485749 FAM104BQ5XKR9 115 aa3.22□□□□□ -1.89
RTN4-213ENST00000485749 ATP11AUNQ6ZP68 121 aa3.22□□□□□ -1.89
RTN4-213ENST00000485749 TMEM136Q6ZRR5 245 aa3.22□□□□□ -1.89
RTN4-213ENST00000485749 CLEC2BQ92478 149 aa3.22□□□□□ -1.89
RTN4-213ENST00000485749 AMELYQ99218 206 aa3.22□□□□□ -1.89
RTN4-213ENST00000485749 PLA2G12AQ9BZM1 189 aa3.22□□□□□ -1.89
RTN4-213ENST00000485749 CMC2Q9NRP2 79 aa3.22□□□□□ -1.89
RTN4-213ENST00000485749 LY96Q9Y6Y9 160 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 113.2 ms