RNA–Protein interactions for RNA: ENST00000485306.1

TRIM54-203, Transcript of tripartite motif containing 54, humanhuman

TSL 2

Gene TRIM54, Length 705 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54-203ENST00000485306 TRBV6-1A0A0K0K1D8 114 aa11.99□□□□□ -0.49
TRIM54-203ENST00000485306 IGKV2D-40P01614 121 aaPredicted RBP11.99□□□□□ -0.49
TRIM54-203ENST00000485306 OR4B1Q8NGF8 309 aa11.99□□□□□ -0.49
TRIM54-203ENST00000485306 FMC1Q96HJ9 113 aa11.99□□□□□ -0.49
TRIM54-203ENST00000485306 AGPAT4-IT1Q9H0P7 198 aa11.99□□□□□ -0.49
TRIM54-203ENST00000485306 ZNF492Q9P255 531 aa11.99□□□□□ -0.49
TRIM54-203ENST00000485306 SCO2A0A1W2PP80 73 aa11.98□□□□□ -0.49
TRIM54-203ENST00000485306 LINC00862A6NCI5 91 aa11.98□□□□□ -0.49
TRIM54-203ENST00000485306 AMBPP02760 352 aa11.98□□□□□ -0.49
TRIM54-203ENST00000485306 TSPOP30536 169 aa11.98□□□□□ -0.49
TRIM54-203ENST00000485306 ZNF138P52744 262 aa11.98□□□□□ -0.49
TRIM54-203ENST00000485306 UBE2G1P62253 170 aa11.98□□□□□ -0.49
TRIM54-203ENST00000485306 TMEM183BQ1AE95 376 aa11.98□□□□□ -0.49
TRIM54-203ENST00000485306 VGLL1Q99990 258 aa11.98□□□□□ -0.49
TRIM54-203ENST00000485306 LEPP41159 167 aa11.97□□□□□ -0.49
TRIM54-203ENST00000485306 FXYD7P58549 80 aa11.97□□□□□ -0.49
TRIM54-203ENST00000485306 TAS2R60P59551 318 aa11.97□□□□□ -0.49
TRIM54-203ENST00000485306 FLI1Q01543 452 aaPredicted RBP11.97□□□□□ -0.49
TRIM54-203ENST00000485306 LGALS9CQ6DKI2 356 aa11.97□□□□□ -0.49
TRIM54-203ENST00000485306 UQCC3Q6UW78 93 aa11.97□□□□□ -0.49
TRIM54-203ENST00000485306 NDFIP1Q9BT67 221 aa11.97□□□□□ -0.49
TRIM54-203ENST00000485306 PSG8Q9UQ74 426 aa11.97□□□□□ -0.49
TRIM54-203ENST00000485306 PLECQ15149 4684 aaKnown RBP11.97□□□□□ -0.49
TRIM54-203ENST00000485306 SMIM9A6NGZ8 99 aa11.96□□□□□ -0.49
TRIM54-203ENST00000485306 IGLV2-11P01706 119 aa11.96□□□□□ -0.49
TRIM54-203ENST00000485306 SRP19P09132 144 aaKnown RBP11.96□□□□□ -0.49
TRIM54-203ENST00000485306 ZNF705DP0CH99 300 aaPredicted RBP11.96□□□□□ -0.49
TRIM54-203ENST00000485306 ZNF705BP0CI00 300 aaPredicted RBP11.96□□□□□ -0.49
TRIM54-203ENST00000485306 CT45A10P0DMU9 189 aa11.96□□□□□ -0.49
TRIM54-203ENST00000485306 ERCC8Q13216 396 aa11.96□□□□□ -0.49
TRIM54-203ENST00000485306 SAPCD1Q5SSQ6 148 aa11.96□□□□□ -0.49
TRIM54-203ENST00000485306 AMTNQ6UX39 209 aa11.96□□□□□ -0.49
TRIM54-203ENST00000485306 NEU1Q99519 415 aa11.96□□□□□ -0.49
TRIM54-203ENST00000485306 ZFP30Q9Y2G7 519 aa11.96□□□□□ -0.49
TRIM54-203ENST00000485306 TRAV10A0A0B4J240 114 aa11.95□□□□□ -0.5
TRIM54-203ENST00000485306 IGLL5B9A064 214 aa11.95□□□□□ -0.5
TRIM54-203ENST00000485306 CRISP2P16562 243 aa11.95□□□□□ -0.5
TRIM54-203ENST00000485306 EIF4E3Q8N5X7 224 aaKnown RBP11.95□□□□□ -0.5
TRIM54-203ENST00000485306 FAM19A4Q96LR4 140 aa11.95□□□□□ -0.5
TRIM54-203ENST00000485306 SLC35B3Q9H1N7 401 aa11.95□□□□□ -0.5
TRIM54-203ENST00000485306 HYDINQ4G0P3 5121 aa11.94□□□□□ -0.5
TRIM54-203ENST00000485306 ALMS1Q8TCU4 4167 aa11.94□□□□□ -0.5
TRIM54-203ENST00000485306 IGHV3OR16-12A0A075B7B8 117 aa11.94□□□□□ -0.5
TRIM54-203ENST00000485306 TRAV8-1A0A0A6YYK1 113 aa11.94□□□□□ -0.5
TRIM54-203ENST00000485306 TMEM189A5PLL7 270 aa11.94□□□□□ -0.5
TRIM54-203ENST00000485306 RPL35P42766 123 aaKnown RBP11.94□□□□□ -0.5
TRIM54-203ENST00000485306 CDKN1BP46527 198 aa11.94□□□□□ -0.5
TRIM54-203ENST00000485306 ZNF705AQ6ZN79 300 aaPredicted RBP11.94□□□□□ -0.5
TRIM54-203ENST00000485306 Q86TA4 180 aa11.94□□□□□ -0.5
TRIM54-203ENST00000485306 SMIM12Q96EX1 92 aa11.94□□□□□ -0.5
TRIM54-203ENST00000485306 LINC00479Q96M42 142 aa11.94□□□□□ -0.5
TRIM54-203ENST00000485306 TRAV34A0A0B4J273 112 aa11.93□□□□□ -0.5
TRIM54-203ENST00000485306 LTAP01374 205 aa11.93□□□□□ -0.5
TRIM54-203ENST00000485306 FAM74A3Q4VXF1 159 aa11.93□□□□□ -0.5
TRIM54-203ENST00000485306 Q6ZTC4 211 aa11.93□□□□□ -0.5
TRIM54-203ENST00000485306 PRNTQ86SH4 94 aa11.93□□□□□ -0.5
TRIM54-203ENST00000485306 COMMD7Q86VX2 200 aa11.93□□□□□ -0.5
TRIM54-203ENST00000485306 TREM1Q9NP99 234 aa11.93□□□□□ -0.5
TRIM54-203ENST00000485306 GOLT1BQ9Y3E0 138 aa11.93□□□□□ -0.5
TRIM54-203ENST00000485306 C9JCJ5 164 aa11.92□□□□□ -0.5
TRIM54-203ENST00000485306 PRB4P10163 310 aaPredicted RBP11.92□□□□□ -0.5
TRIM54-203ENST00000485306 SRSF3P84103 164 aaKnown RBP11.92□□□□□ -0.5
TRIM54-203ENST00000485306 COX8CQ7Z4L0 72 aa11.92□□□□□ -0.5
TRIM54-203ENST00000485306 BAGE2Q86Y30 109 aa11.92□□□□□ -0.5
TRIM54-203ENST00000485306 Q8TAT8 98 aa11.92□□□□□ -0.5
TRIM54-203ENST00000485306 PARLQ9H300 379 aa11.92□□□□□ -0.5
TRIM54-203ENST00000485306 KLLNB2CW77 178 aa11.91□□□□□ -0.5
TRIM54-203ENST00000485306 SPART-AS1P0CW21 52 aa11.91□□□□□ -0.5
TRIM54-203ENST00000485306 TMEM183AQ8IXX5 376 aa11.91□□□□□ -0.5
TRIM54-203ENST00000485306 ZFAND2AQ8N6M9 145 aa11.91□□□□□ -0.5
TRIM54-203ENST00000485306 SGK494Q96LW2 274 aa11.91□□□□□ -0.5
TRIM54-203ENST00000485306 C20orf144Q9BQM9 153 aa11.91□□□□□ -0.5
TRIM54-203ENST00000485306 CELA1Q9UNI1 258 aa11.91□□□□□ -0.5
TRIM54-203ENST00000485306 TEX48A0A1B0GUV7 120 aa11.9□□□□□ -0.5
TRIM54-203ENST00000485306 C9JQL5 133 aa11.9□□□□□ -0.5
TRIM54-203ENST00000485306 GPX1P07203 203 aa11.9□□□□□ -0.5
TRIM54-203ENST00000485306 GNG4P50150 75 aa11.9□□□□□ -0.5
TRIM54-203ENST00000485306 EMP1P54849 157 aa11.9□□□□□ -0.5
TRIM54-203ENST00000485306 NDUFA5Q16718 116 aa11.9□□□□□ -0.5
TRIM54-203ENST00000485306 SPINK13Q1W4C9 94 aa11.9□□□□□ -0.5
TRIM54-203ENST00000485306 C12orf74Q32Q52 190 aa11.9□□□□□ -0.5
TRIM54-203ENST00000485306 SMUG1Q53HV7 270 aa11.9□□□□□ -0.5
TRIM54-203ENST00000485306 SOHLH1Q5JUK2 328 aa11.9□□□□□ -0.5
TRIM54-203ENST00000485306 TVP23CQ96ET8 276 aa11.9□□□□□ -0.5
TRIM54-203ENST00000485306 IGF2BP2-AS1Q96M15 143 aa11.9□□□□□ -0.5
TRIM54-203ENST00000485306 DERL1Q9BUN8 251 aa11.9□□□□□ -0.5
TRIM54-203ENST00000485306 BIN3Q9NQY0 253 aa11.9□□□□□ -0.5
TRIM54-203ENST00000485306 APLNQ9ULZ1 77 aa11.9□□□□□ -0.5
TRIM54-203ENST00000485306 DEFB131BA0A096LNP1 70 aa11.89□□□□□ -0.51
TRIM54-203ENST00000485306 ZNF727A8MUV8 499 aa11.89□□□□□ -0.51
TRIM54-203ENST00000485306 M0R2Z0 102 aa11.89□□□□□ -0.51
TRIM54-203ENST00000485306 INSP01308 110 aa11.89□□□□□ -0.51
TRIM54-203ENST00000485306 CEBPGP53567 150 aa11.89□□□□□ -0.51
TRIM54-203ENST00000485306 ZNF674Q2M3X9 581 aa11.89□□□□□ -0.51
TRIM54-203ENST00000485306 CENPWQ5EE01 88 aa11.89□□□□□ -0.51
TRIM54-203ENST00000485306 C1orf158Q8N1D5 194 aa11.89□□□□□ -0.51
TRIM54-203ENST00000485306 SMIM7Q9BQ49 75 aa11.89□□□□□ -0.51
TRIM54-203ENST00000485306 TMEM208Q9BTX3 173 aa11.89□□□□□ -0.51
TRIM54-203ENST00000485306 MLST8Q9BVC4 326 aa11.89□□□□□ -0.51
TRIM54-203ENST00000485306 LY96Q9Y6Y9 160 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms