RNA–Protein interactions for RNA: ENST00000485023.1

DDR1-246, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-246ENST00000485023 SUMO1P63165 101 aaKnown RBP11.5□□□□□ -0.57
DDR1-246ENST00000485023 MUC21Q5SSG8 566 aa11.5□□□□□ -0.57
DDR1-246ENST00000485023 TMUB2Q71RG4 321 aa11.5□□□□□ -0.57
DDR1-246ENST00000485023 MAP1LC3BQ9GZQ8 125 aa11.5□□□□□ -0.57
DDR1-246ENST00000485023 NMBP08949 121 aa11.49□□□□□ -0.57
DDR1-246ENST00000485023 TCTAP57738 103 aa11.49□□□□□ -0.57
DDR1-246ENST00000485023 EIF4E3Q8N5X7 224 aaKnown RBP11.49□□□□□ -0.57
DDR1-246ENST00000485023 C5orf17Q8NAS9 161 aa11.49□□□□□ -0.57
DDR1-246ENST00000485023 SUN5Q8TC36 379 aa11.49□□□□□ -0.57
DDR1-246ENST00000485023 NDUFAF3Q9BU61 184 aa11.49□□□□□ -0.57
DDR1-246ENST00000485023 GSN-AS1Q9NRJ2 163 aa11.49□□□□□ -0.57
DDR1-246ENST00000485023 TP53TG3Q9ULZ0 132 aa11.49□□□□□ -0.57
DDR1-246ENST00000485023 IGHV1OR15-1A0A075B7D0 117 aa11.48□□□□□ -0.57
DDR1-246ENST00000485023 A0A1B0GV50 99 aa11.48□□□□□ -0.57
DDR1-246ENST00000485023 GAGE12BA1L429 117 aa11.48□□□□□ -0.57
DDR1-246ENST00000485023 GAGE7O76087 117 aa11.48□□□□□ -0.57
DDR1-246ENST00000485023 TCRAP04437 139 aa11.48□□□□□ -0.57
DDR1-246ENST00000485023 GAGE12FP0CL80 117 aa11.48□□□□□ -0.57
DDR1-246ENST00000485023 GAGE12GP0CL81 117 aa11.48□□□□□ -0.57
DDR1-246ENST00000485023 GAGE12IP0CL82 117 aa11.48□□□□□ -0.57
DDR1-246ENST00000485023 LGALS9CQ6DKI2 356 aa11.48□□□□□ -0.57
DDR1-246ENST00000485023 TMEM88Q6PEY1 159 aa11.48□□□□□ -0.57
DDR1-246ENST00000485023 NAGKQ9UJ70 344 aa11.48□□□□□ -0.57
DDR1-246ENST00000485023 TRBV7-9A0A0J9YWB2 115 aa11.47□□□□□ -0.57
DDR1-246ENST00000485023 F5H768 121 aa11.47□□□□□ -0.57
DDR1-246ENST00000485023 TCTE3Q8IZS6 198 aa11.47□□□□□ -0.57
DDR1-246ENST00000485023 ZNF680Q8NEM1 530 aa11.47□□□□□ -0.57
DDR1-246ENST00000485023 FAM213BQ8TBF2 198 aa11.47□□□□□ -0.57
DDR1-246ENST00000485023 TMED6Q8WW62 240 aa11.47□□□□□ -0.57
DDR1-246ENST00000485023 TVP23CQ96ET8 276 aa11.47□□□□□ -0.57
DDR1-246ENST00000485023 VPS13DQ5THJ4 4388 aa11.46□□□□□ -0.57
DDR1-246ENST00000485023 IFNA7P01567 189 aa11.46□□□□□ -0.57
DDR1-246ENST00000485023 ATP5G1P05496 136 aa11.46□□□□□ -0.57
DDR1-246ENST00000485023 SEC11BP0C7V7 166 aa11.46□□□□□ -0.57
DDR1-246ENST00000485023 ATP5G3P48201 142 aa11.46□□□□□ -0.57
DDR1-246ENST00000485023 Q6ZTI0 123 aa11.46□□□□□ -0.57
DDR1-246ENST00000485023 C11orf72Q8NBR9 251 aa11.46□□□□□ -0.57
DDR1-246ENST00000485023 LINC00467Q9BRT7 94 aa11.46□□□□□ -0.57
DDR1-246ENST00000485023 TREM1Q9NP99 234 aa11.46□□□□□ -0.57
DDR1-246ENST00000485023 EPDR1Q9UM22 224 aa11.46□□□□□ -0.57
DDR1-246ENST00000485023 KLF12Q9Y4X4 402 aa11.46□□□□□ -0.57
DDR1-246ENST00000485023 LENEPQ9Y5L5 61 aa11.46□□□□□ -0.57
DDR1-246ENST00000485023 A0A1W2PRE2 83 aa11.45□□□□□ -0.58
DDR1-246ENST00000485023 K7EQM0 130 aa11.45□□□□□ -0.58
DDR1-246ENST00000485023 TPT1P13693 172 aaKnown RBP11.45□□□□□ -0.58
DDR1-246ENST00000485023 ANXA2RQ3ZCQ2 193 aa11.45□□□□□ -0.58
DDR1-246ENST00000485023 PRNTQ86SH4 94 aa11.45□□□□□ -0.58
DDR1-246ENST00000485023 AKAP14Q86UN6 197 aa11.45□□□□□ -0.58
DDR1-246ENST00000485023 ARL6IP6Q8N6S5 226 aa11.45□□□□□ -0.58
DDR1-246ENST00000485023 CYB561D1Q8N8Q1 229 aa11.45□□□□□ -0.58
DDR1-246ENST00000485023 C8orf49Q96NF6 230 aa11.45□□□□□ -0.58
DDR1-246ENST00000485023 NDFIP1Q9BT67 221 aa11.45□□□□□ -0.58
DDR1-246ENST00000485023 TRGV1A0A0A0MS02 117 aa11.44□□□□□ -0.58
DDR1-246ENST00000485023 SERTM2A0A1B0GWG4 89 aa11.44□□□□□ -0.58
DDR1-246ENST00000485023 FAM74A7A6NL05 159 aa11.44□□□□□ -0.58
DDR1-246ENST00000485023 EIF5AP63241 154 aaKnown RBP11.44□□□□□ -0.58
DDR1-246ENST00000485023 LGALSLQ3ZCW2 172 aaPredicted RBP11.44□□□□□ -0.58
DDR1-246ENST00000485023 Q6AWC8 147 aa11.44□□□□□ -0.58
DDR1-246ENST00000485023 STOML3Q8TAV4 291 aa11.44□□□□□ -0.58
DDR1-246ENST00000485023 ATG101Q9BSB4 218 aa11.44□□□□□ -0.58
DDR1-246ENST00000485023 PSG8Q9UQ74 426 aa11.44□□□□□ -0.58
DDR1-246ENST00000485023 TRAV34A0A0B4J273 112 aa11.43□□□□□ -0.58
DDR1-246ENST00000485023 UMAD1C9J7I0 102 aa11.43□□□□□ -0.58
DDR1-246ENST00000485023 C1QBP02746 253 aa11.43□□□□□ -0.58
DDR1-246ENST00000485023 TCL1AP56279 114 aa11.43□□□□□ -0.58
DDR1-246ENST00000485023 FLI1Q01543 452 aaPredicted RBP11.43□□□□□ -0.58
DDR1-246ENST00000485023 ZNF415Q09FC8 603 aa11.43□□□□□ -0.58
DDR1-246ENST00000485023 DAZ2Q13117 558 aaKnown RBP11.43□□□□□ -0.58
DDR1-246ENST00000485023 TMEM183BQ1AE95 376 aa11.43□□□□□ -0.58
DDR1-246ENST00000485023 FAM159AQ6UWV7 190 aa11.43□□□□□ -0.58
DDR1-246ENST00000485023 TMEM183AQ8IXX5 376 aa11.43□□□□□ -0.58
DDR1-246ENST00000485023 LINC00612Q8N6U2 182 aa11.43□□□□□ -0.58
DDR1-246ENST00000485023 SFT2D1Q8WV19 159 aa11.43□□□□□ -0.58
DDR1-246ENST00000485023 LINC00479Q96M42 142 aa11.43□□□□□ -0.58
DDR1-246ENST00000485023 MRPL16Q9NX20 251 aaKnown RBP11.43□□□□□ -0.58
DDR1-246ENST00000485023 TRGV2A0A075B6R0 118 aa11.42□□□□□ -0.58
DDR1-246ENST00000485023 PEX7O00628 323 aa11.42□□□□□ -0.58
DDR1-246ENST00000485023 IGLV2-11P01706 119 aa11.42□□□□□ -0.58
DDR1-246ENST00000485023 OR5I1Q13606 314 aa11.42□□□□□ -0.58
DDR1-246ENST00000485023 CST9LP1Q5W188 147 aa11.42□□□□□ -0.58
DDR1-246ENST00000485023 FAM210BQ96KR6 192 aa11.42□□□□□ -0.58
DDR1-246ENST00000485023 TRAV21A0A0B4J279 112 aa11.41□□□□□ -0.58
DDR1-246ENST00000485023 A0A1B0GVG6 124 aa11.41□□□□□ -0.58
DDR1-246ENST00000485023 NUDT3O95989 172 aa11.41□□□□□ -0.58
DDR1-246ENST00000485023 ZNF80P51504 273 aaPredicted RBP11.41□□□□□ -0.58
DDR1-246ENST00000485023 IBA57Q5T440 356 aaKnown RBP11.41□□□□□ -0.58
DDR1-246ENST00000485023 UBE2DNLQ8IWF7 75 aa11.41□□□□□ -0.58
DDR1-246ENST00000485023 TMEM75Q8N9X5 138 aa11.41□□□□□ -0.58
DDR1-246ENST00000485023 MDFICQ9P1T7 246 aa11.41□□□□□ -0.58
DDR1-246ENST00000485023 GCGP01275 180 aa11.4□□□□□ -0.58
DDR1-246ENST00000485023 IGHV3-53P01767 116 aa11.4□□□□□ -0.58
DDR1-246ENST00000485023 P0DMU3 169 aa11.4□□□□□ -0.58
DDR1-246ENST00000485023 FAM231AP0DMU4 169 aa11.4□□□□□ -0.58
DDR1-246ENST00000485023 FAM231CP0DMU5 169 aa11.4□□□□□ -0.58
DDR1-246ENST00000485023 HOXA5P20719 270 aa11.4□□□□□ -0.58
DDR1-246ENST00000485023 ZFP69Q49AA0 526 aa11.4□□□□□ -0.58
DDR1-246ENST00000485023 TRGV11A0A075B6L2 103 aa11.39□□□□□ -0.59
DDR1-246ENST00000485023 A0A0J9YY99 117 aa11.39□□□□□ -0.59
DDR1-246ENST00000485023 GNRH2O43555 120 aa11.39□□□□□ -0.59
DDR1-246ENST00000485023 SPINK4O60575 86 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms