RNA–Protein interactions for RNA: ENST00000484855.2

CTSA-207, Transcript of cathepsin A, humanhuman

TSL 1 (best)

Gene CTSA, Length 2,183 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-207ENST00000484855 SLAQ13239 276 aa12.6□□□□□ -0.39
CTSA-207ENST00000484855 KIAA1644Q3SXP7 199 aa12.6□□□□□ -0.39
CTSA-207ENST00000484855 TPPP3Q9BW30 176 aa12.6□□□□□ -0.39
CTSA-207ENST00000484855 LENEPQ9Y5L5 61 aa12.6□□□□□ -0.39
CTSA-207ENST00000484855 TFPI2P48307 235 aa12.59□□□□□ -0.39
CTSA-207ENST00000484855 SRSF2Q01130 221 aaKnown RBP12.59□□□□□ -0.39
CTSA-207ENST00000484855 HIST1H1AQ02539 215 aaPredicted RBP12.59□□□□□ -0.39
CTSA-207ENST00000484855 C11orf44Q8N8P7 122 aa12.59□□□□□ -0.39
CTSA-207ENST00000484855 OR8A1Q8NGG7 326 aa12.59□□□□□ -0.39
CTSA-207ENST00000484855 WFDC12Q8WWY7 111 aa12.59□□□□□ -0.39
CTSA-207ENST00000484855 JMJD8Q96S16 334 aa12.59□□□□□ -0.39
CTSA-207ENST00000484855 SSBP4Q9BWG4 385 aaPredicted RBP12.59□□□□□ -0.39
CTSA-207ENST00000484855 PEMTQ9UBM1 199 aa12.59□□□□□ -0.39
CTSA-207ENST00000484855 A0A1B0GUT8 65 aa12.59□□□□□ -0.39
CTSA-207ENST00000484855 F6UB75 175 aa12.59□□□□□ -0.39
CTSA-207ENST00000484855 HAX1O00165 279 aa12.59□□□□□ -0.39
CTSA-207ENST00000484855 ORM1P02763 201 aa12.59□□□□□ -0.39
CTSA-207ENST00000484855 CD28P10747 220 aa12.59□□□□□ -0.39
CTSA-207ENST00000484855 ARMS2P0C7Q2 107 aa12.58□□□□□ -0.4
CTSA-207ENST00000484855 BORCS7Q96B45 105 aa12.58□□□□□ -0.4
CTSA-207ENST00000484855 A0A1B0GUS0 222 aa12.57□□□□□ -0.4
CTSA-207ENST00000484855 RIGQ13278 110 aa12.57□□□□□ -0.4
CTSA-207ENST00000484855 LINC01559Q495D7 138 aa12.57□□□□□ -0.4
CTSA-207ENST00000484855 OR9G4Q8NGQ1 327 aa12.57□□□□□ -0.4
CTSA-207ENST00000484855 SRIP30626 198 aa12.57□□□□□ -0.4
CTSA-207ENST00000484855 ADAMTSL5Q6ZMM2 481 aa12.57□□□□□ -0.4
CTSA-207ENST00000484855 LINC00518Q8N0U6 118 aa12.57□□□□□ -0.4
CTSA-207ENST00000484855 A0A1W2PRX2 142 aa12.56□□□□□ -0.4
CTSA-207ENST00000484855 K7EQG2 157 aa12.56□□□□□ -0.4
CTSA-207ENST00000484855 ZNF688P0C7X2 276 aa12.56□□□□□ -0.4
CTSA-207ENST00000484855 FABP4P15090 132 aa12.56□□□□□ -0.4
CTSA-207ENST00000484855 SNRPD3P62318 126 aaKnown RBP12.56□□□□□ -0.4
CTSA-207ENST00000484855 LYZL1Q6UWQ5 148 aa12.56□□□□□ -0.4
CTSA-207ENST00000484855 DLX4Q92988 240 aaPredicted RBP12.56□□□□□ -0.4
CTSA-207ENST00000484855 PRR9Q5T870 116 aa12.56□□□□□ -0.4
CTSA-207ENST00000484855 A0A1B0GW15 77 aa12.55□□□□□ -0.4
CTSA-207ENST00000484855 INAFM1C9JVW0 142 aa12.55□□□□□ -0.4
CTSA-207ENST00000484855 NDUFA7O95182 113 aa12.55□□□□□ -0.4
CTSA-207ENST00000484855 PSMG4Q5JS54 123 aa12.55□□□□□ -0.4
CTSA-207ENST00000484855 PRR31Q5SQ13 230 aa12.55□□□□□ -0.4
CTSA-207ENST00000484855 FER1L6-AS1Q8NA97 138 aa12.55□□□□□ -0.4
CTSA-207ENST00000484855 RAX2Q96IS3 184 aa12.55□□□□□ -0.4
CTSA-207ENST00000484855 HIST1H2BLQ99880 126 aa12.55□□□□□ -0.4
CTSA-207ENST00000484855 J3KRW8 73 aa12.54□□□□□ -0.4
CTSA-207ENST00000484855 PAFAH1B2P68402 229 aa12.54□□□□□ -0.4
CTSA-207ENST00000484855 Q0VG73 95 aa12.54□□□□□ -0.4
CTSA-207ENST00000484855 TMEM256Q8N2U0 113 aa12.54□□□□□ -0.4
CTSA-207ENST00000484855 ZFAND2AQ8N6M9 145 aa12.54□□□□□ -0.4
CTSA-207ENST00000484855 CITED2Q99967 270 aaPredicted RBP12.54□□□□□ -0.4
CTSA-207ENST00000484855 TP53TG3Q9ULZ0 132 aa12.54□□□□□ -0.4
CTSA-207ENST00000484855 TSSC4Q9Y5U2 329 aaPredicted RBP12.54□□□□□ -0.4
CTSA-207ENST00000484855 BAGE3Q86Y29 109 aa12.54□□□□□ -0.4
CTSA-207ENST00000484855 FAM19A4Q96LR4 140 aa12.54□□□□□ -0.4
CTSA-207ENST00000484855 IGLC6P0CF74 106 aa12.53□□□□□ -0.4
CTSA-207ENST00000484855 CTRLP40313 264 aa12.53□□□□□ -0.4
CTSA-207ENST00000484855 OR10J3Q5JRS4 329 aa12.53□□□□□ -0.4
CTSA-207ENST00000484855 ZNF575Q86XF7 245 aa12.53□□□□□ -0.4
CTSA-207ENST00000484855 OR10D4PQ8NGN7 298 aa12.53□□□□□ -0.4
CTSA-207ENST00000484855 C11orf21Q9P2W6 132 aa12.53□□□□□ -0.4
CTSA-207ENST00000484855 RNF114Q9Y508 228 aa12.53□□□□□ -0.4
CTSA-207ENST00000484855 IGKV3D-20A0A0C4DH25 116 aa12.53□□□□□ -0.4
CTSA-207ENST00000484855 TRBV7-9A0A0J9YWB2 115 aa12.53□□□□□ -0.4
CTSA-207ENST00000484855 F2Z2F3 143 aa12.53□□□□□ -0.4
CTSA-207ENST00000484855 AMBPP02760 352 aa12.53□□□□□ -0.4
CTSA-207ENST00000484855 CSN3P07498 182 aa12.53□□□□□ -0.4
CTSA-207ENST00000484855 SMIM6P0DI80 62 aa12.53□□□□□ -0.4
CTSA-207ENST00000484855 FHL3Q13643 280 aa12.53□□□□□ -0.4
CTSA-207ENST00000484855 PACRGQ96M98 296 aaPredicted RBP12.53□□□□□ -0.4
CTSA-207ENST00000484855 C12orf57Q99622 126 aa12.53□□□□□ -0.4
CTSA-207ENST00000484855 GPX1P07203 203 aa12.52□□□□□ -0.4
CTSA-207ENST00000484855 FOSL1P15407 271 aa12.52□□□□□ -0.4
CTSA-207ENST00000484855 GATD1Q8NB37 220 aa12.52□□□□□ -0.4
CTSA-207ENST00000484855 DYNLRB2Q8TF09 96 aa12.52□□□□□ -0.4
CTSA-207ENST00000484855 CCL24O00175 119 aa12.52□□□□□ -0.41
CTSA-207ENST00000484855 NUPR1O60356 82 aa12.52□□□□□ -0.41
CTSA-207ENST00000484855 SERF1AO75920 110 aa12.52□□□□□ -0.41
CTSA-207ENST00000484855 SSTP61278 116 aa12.52□□□□□ -0.41
CTSA-207ENST00000484855 Q6ZQT7 251 aa12.52□□□□□ -0.41
CTSA-207ENST00000484855 TMEM18Q96B42 140 aa12.52□□□□□ -0.41
CTSA-207ENST00000484855 TRAV21A0A0B4J279 112 aa12.51□□□□□ -0.41
CTSA-207ENST00000484855 CD33P20138 364 aa12.51□□□□□ -0.41
CTSA-207ENST00000484855 ALKBH7Q9BT30 221 aaPredicted RBP12.51□□□□□ -0.41
CTSA-207ENST00000484855 MUC21A0A0G2JKD1 596 aa12.5□□□□□ -0.41
CTSA-207ENST00000484855 MUC21A0A140T8X8 626 aa12.5□□□□□ -0.41
CTSA-207ENST00000484855 LINC00310P59036 64 aa12.5□□□□□ -0.41
CTSA-207ENST00000484855 MUC21Q5SSG8 566 aa12.5□□□□□ -0.41
CTSA-207ENST00000484855 APRG1Q8IVJ8 170 aa12.5□□□□□ -0.41
CTSA-207ENST00000484855 LOC102724200A0A096LPH7 203 aaPredicted RBP12.5□□□□□ -0.41
CTSA-207ENST00000484855 A0A0J9YX75 114 aa12.5□□□□□ -0.41
CTSA-207ENST00000484855 TCF21O43680 179 aa12.5□□□□□ -0.41
CTSA-207ENST00000484855 EBLN2Q6P2I7 272 aa12.5□□□□□ -0.41
CTSA-207ENST00000484855 C18orf32Q8TCD1 76 aa12.5□□□□□ -0.41
CTSA-207ENST00000484855 NAGKQ9UJ70 344 aa12.5□□□□□ -0.41
CTSA-207ENST00000484855 ESDP10768 282 aa12.49□□□□□ -0.41
CTSA-207ENST00000484855 RNASE4P34096 147 aaKnown RBP12.49□□□□□ -0.41
CTSA-207ENST00000484855 PROK1P58294 105 aa12.49□□□□□ -0.41
CTSA-207ENST00000484855 TMEM61Q8N0U2 210 aa12.49□□□□□ -0.41
CTSA-207ENST00000484855 IQCJQ1A5X6 159 aa12.49□□□□□ -0.41
CTSA-207ENST00000484855 ZNF493Q6ZR52 646 aa12.49□□□□□ -0.41
CTSA-207ENST00000484855 TRAV2A0A0B4J234 112 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 173.1 ms