RNA–Protein interactions for RNA: ENST00000482785.1

SHQ1-208, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 3

Gene SHQ1, Length 502 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-208ENST00000482785 APOFQ13790 326 aa2.21□□□□□ -2.06
SHQ1-208ENST00000482785 LCE1FQ5T754 118 aa2.21□□□□□ -2.06
SHQ1-208ENST00000482785 S100A7AQ86SG5 101 aa2.21□□□□□ -2.06
SHQ1-208ENST00000482785 OR2T4Q8NH00 348 aa2.21□□□□□ -2.06
SHQ1-208ENST00000482785 RTN4IP1Q8WWV3 396 aaPredicted RBP2.21□□□□□ -2.06
SHQ1-208ENST00000482785 RMI2Q96E14 147 aa2.21□□□□□ -2.06
SHQ1-208ENST00000482785 ERMAPQ96PL5 475 aaPredicted RBP2.21□□□□□ -2.06
SHQ1-208ENST00000482785 NMNAT3Q96T66 252 aa2.21□□□□□ -2.06
SHQ1-208ENST00000482785 PHB2Q99623 299 aa2.21□□□□□ -2.06
SHQ1-208ENST00000482785 DOK5Q9P104 306 aa2.21□□□□□ -2.06
SHQ1-208ENST00000482785 HHLA2Q9UM44 414 aa2.21□□□□□ -2.06
SHQ1-208ENST00000482785 BAIAP2Q9UQB8 552 aa2.21□□□□□ -2.06
SHQ1-208ENST00000482785 CARHSP1Q9Y2V2 147 aaKnown RBP2.21□□□□□ -2.06
SHQ1-208ENST00000482785 PRELID3BQ9Y3B1 194 aa2.21□□□□□ -2.06
SHQ1-208ENST00000482785 NOP16Q9Y3C1 178 aaKnown RBP2.21□□□□□ -2.06
SHQ1-208ENST00000482785 MRPS16Q9Y3D3 137 aaKnown RBP2.21□□□□□ -2.06
SHQ1-208ENST00000482785 LINC00588Q9Y4M8 146 aa2.21□□□□□ -2.06
SHQ1-208ENST00000482785 LHFPL6Q9Y693 200 aa2.21□□□□□ -2.06
SHQ1-208ENST00000482785 IGKV1-12A0A0C4DH73 117 aa2.2□□□□□ -2.06
SHQ1-208ENST00000482785 TCRBV3S1A0A5B6 114 aa2.2□□□□□ -2.06
SHQ1-208ENST00000482785 DHRS12A0PJE2 317 aa2.2□□□□□ -2.06
SHQ1-208ENST00000482785 LINC00862A6NCI5 91 aa2.2□□□□□ -2.06
SHQ1-208ENST00000482785 ZNF878C9JN71 531 aa2.2□□□□□ -2.06
SHQ1-208ENST00000482785 C15orf65H3BRN8 121 aa2.2□□□□□ -2.06
SHQ1-208ENST00000482785 H7C1C5 153 aa2.2□□□□□ -2.06
SHQ1-208ENST00000482785 M0R381 172 aa2.2□□□□□ -2.06
SHQ1-208ENST00000482785 GNGT2O14610 69 aa2.2□□□□□ -2.06
SHQ1-208ENST00000482785 IGKV1D-12P01611 117 aa2.2□□□□□ -2.06
SHQ1-208ENST00000482785 TTRP02766 147 aa2.2□□□□□ -2.06
SHQ1-208ENST00000482785 TFF1P04155 84 aa2.2□□□□□ -2.06
SHQ1-208ENST00000482785 FABP1P07148 127 aa2.2□□□□□ -2.06
SHQ1-208ENST00000482785 LGALS1P09382 135 aaKnown RBP2.2□□□□□ -2.06
SHQ1-208ENST00000482785 OR4E1P0C645 316 aa2.2□□□□□ -2.06
SHQ1-208ENST00000482785 CGB3P0DN86 165 aa2.2□□□□□ -2.06
SHQ1-208ENST00000482785 CGB7P0DN87 165 aa2.2□□□□□ -2.06
SHQ1-208ENST00000482785 MUC1P15941 1255 aaPredicted RBP2.2□□□□□ -2.06
SHQ1-208ENST00000482785 NPY1RP25929 384 aa2.2□□□□□ -2.06
SHQ1-208ENST00000482785 OR10J1P30954 320 aa2.2□□□□□ -2.06
SHQ1-208ENST00000482785 CD200P41217 278 aa2.2□□□□□ -2.06
SHQ1-208ENST00000482785 POLR2GP62487 172 aaKnown RBP eCLIP2.2□□□□□ -2.06
SHQ1-208ENST00000482785 LCN6P62502 163 aa2.2□□□□□ -2.06
SHQ1-208ENST00000482785 RPL19P84098 196 aaKnown RBP2.2□□□□□ -2.06
SHQ1-208ENST00000482785 CDK10Q15131 360 aa2.2□□□□□ -2.06
SHQ1-208ENST00000482785 SLC36A1Q7Z2H8 476 aa2.2□□□□□ -2.06
SHQ1-208ENST00000482785 DAZ4Q86SG3 579 aaKnown RBP2.2□□□□□ -2.06
SHQ1-208ENST00000482785 ZNF676Q8N7Q3 588 aa2.2□□□□□ -2.06
SHQ1-208ENST00000482785 Q8N9L7 120 aa2.2□□□□□ -2.06
SHQ1-208ENST00000482785 ST20-AS1Q8NBB2 130 aa2.2□□□□□ -2.06
SHQ1-208ENST00000482785 OR4K13Q8NH42 304 aa2.2□□□□□ -2.06
SHQ1-208ENST00000482785 SPTSSAQ969W0 71 aa2.2□□□□□ -2.06
SHQ1-208ENST00000482785 BORCS7Q96B45 105 aa2.2□□□□□ -2.06
SHQ1-208ENST00000482785 CPNE2Q96FN4 548 aaPredicted RBP2.2□□□□□ -2.06
SHQ1-208ENST00000482785 SFRP2Q96HF1 295 aa2.2□□□□□ -2.06
SHQ1-208ENST00000482785 SIGMAR1Q99720 223 aa2.2□□□□□ -2.06
SHQ1-208ENST00000482785 CMSS1Q9BQ75 279 aaKnown RBP2.2□□□□□ -2.06
SHQ1-208ENST00000482785 TSSK6Q9BXA6 273 aa2.2□□□□□ -2.06
SHQ1-208ENST00000482785 GABARAPL1Q9H0R8 117 aa2.2□□□□□ -2.06
SHQ1-208ENST00000482785 OR2D2Q9H210 308 aa2.2□□□□□ -2.06
SHQ1-208ENST00000482785 DAZ1Q9NQZ3 744 aaKnown RBP2.2□□□□□ -2.06
SHQ1-208ENST00000482785 KCNIP2Q9NS61 270 aa2.2□□□□□ -2.06
SHQ1-208ENST00000482785 ARMC1Q9NVT9 282 aa2.2□□□□□ -2.06
SHQ1-208ENST00000482785 AP4S1Q9Y587 144 aa2.2□□□□□ -2.06
SHQ1-208ENST00000482785 TRAPPC1Q9Y5R8 145 aa2.2□□□□□ -2.06
SHQ1-208ENST00000482785 PXMP4Q9Y6I8 212 aa2.2□□□□□ -2.06
SHQ1-208ENST00000482785 OR4C45A6NMZ5 311 aa2.19□□□□□ -2.06
SHQ1-208ENST00000482785 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.19□□□□□ -2.06
SHQ1-208ENST00000482785 M0R135 149 aa2.19□□□□□ -2.06
SHQ1-208ENST00000482785 GSTZ1O43708 216 aaPredicted RBP2.19□□□□□ -2.06
SHQ1-208ENST00000482785 APOMO95445 188 aa2.19□□□□□ -2.06
SHQ1-208ENST00000482785 IFNGP01579 166 aa2.19□□□□□ -2.06
SHQ1-208ENST00000482785 APOC1P02654 83 aa2.19□□□□□ -2.06
SHQ1-208ENST00000482785 HMGN1P05114 100 aa2.19□□□□□ -2.06
SHQ1-208ENST00000482785 SPI1P17947 270 aa2.19□□□□□ -2.06
SHQ1-208ENST00000482785 CCL1P22362 96 aa2.19□□□□□ -2.06
SHQ1-208ENST00000482785 ATP6V0CP27449 155 aa2.19□□□□□ -2.06
SHQ1-208ENST00000482785 AKR1C2P52895 323 aa2.19□□□□□ -2.06
SHQ1-208ENST00000482785 KRTAP19-2Q3LHN2 52 aa2.19□□□□□ -2.06
SHQ1-208ENST00000482785 LINC00483Q53H64 154 aa2.19□□□□□ -2.06
SHQ1-208ENST00000482785 TMEM69Q5SWH9 247 aa2.19□□□□□ -2.06
SHQ1-208ENST00000482785 LINC01590Q5TEZ4 76 aa2.19□□□□□ -2.06
SHQ1-208ENST00000482785 OR2T2Q6IF00 324 aa2.19□□□□□ -2.06
SHQ1-208ENST00000482785 C3orf22Q8N5N4 141 aa2.19□□□□□ -2.06
SHQ1-208ENST00000482785 OR8D4Q8NGM9 314 aa2.19□□□□□ -2.06
SHQ1-208ENST00000482785 OR2T27Q8NH04 317 aa2.19□□□□□ -2.06
SHQ1-208ENST00000482785 OR4X1Q8NH49 305 aa2.19□□□□□ -2.06
SHQ1-208ENST00000482785 LHFPL5Q8TAF8 219 aa2.19□□□□□ -2.06
SHQ1-208ENST00000482785 CANT1Q8WVQ1 401 aa2.19□□□□□ -2.06
SHQ1-208ENST00000482785 DNAJC9Q8WXX5 260 aa2.19□□□□□ -2.06
SHQ1-208ENST00000482785 SLC7A6Q92536 515 aa2.19□□□□□ -2.06
SHQ1-208ENST00000482785 RBPMSQ93062 196 aaKnown RBP2.19□□□□□ -2.06
SHQ1-208ENST00000482785 SLAMF6Q96DU3 332 aa2.19□□□□□ -2.06
SHQ1-208ENST00000482785 TBX5Q99593 518 aa2.19□□□□□ -2.06
SHQ1-208ENST00000482785 NIPSNAP1Q9BPW8 284 aa2.19□□□□□ -2.06
SHQ1-208ENST00000482785 RERGLQ9H628 205 aa2.19□□□□□ -2.06
SHQ1-208ENST00000482785 C8orf4Q9NR00 106 aa2.19□□□□□ -2.06
SHQ1-208ENST00000482785 CMC2Q9NRP2 79 aa2.19□□□□□ -2.06
SHQ1-208ENST00000482785 MRPL27Q9P0M9 148 aaKnown RBP2.19□□□□□ -2.06
SHQ1-208ENST00000482785 ZNF230Q9UIE0 474 aaPredicted RBP2.19□□□□□ -2.06
SHQ1-208ENST00000482785 ANAPC10Q9UM13 185 aa2.19□□□□□ -2.06
SHQ1-208ENST00000482785 PHLDA3Q9Y5J5 127 aa2.19□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms