RNA–Protein interactions for RNA: ENST00000482158.1

SF3B1-210, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-210ENST00000482158 TEX14Q8IWB6 1497 aa1.9□□□□□ -2.11
SF3B1-210ENST00000482158 PTPRDP23468 1912 aa1.9□□□□□ -2.11
SF3B1-210ENST00000482158 FN1P02751 2386 aaKnown RBP1.9□□□□□ -2.11
SF3B1-210ENST00000482158 TRAV12-2A0A075B6T6 113 aa1.9□□□□□ -2.11
SF3B1-210ENST00000482158 SMIM31A0A1B0GVY4 71 aa1.9□□□□□ -2.11
SF3B1-210ENST00000482158 GEMIN2O14893 280 aaKnown RBP1.9□□□□□ -2.11
SF3B1-210ENST00000482158 PITX3O75364 302 aa1.9□□□□□ -2.11
SF3B1-210ENST00000482158 HLA-DMBP28068 263 aa1.9□□□□□ -2.11
SF3B1-210ENST00000482158 RPL27AP46776 148 aaKnown RBP1.9□□□□□ -2.11
SF3B1-210ENST00000482158 RPL26P61254 145 aaKnown RBP1.9□□□□□ -2.11
SF3B1-210ENST00000482158 UBA52P62987 128 aaKnown RBP1.9□□□□□ -2.11
SF3B1-210ENST00000482158 TMEM155Q4W5P6 130 aa1.9□□□□□ -2.11
SF3B1-210ENST00000482158 MRPL54Q6P161 138 aaKnown RBP1.9□□□□□ -2.11
SF3B1-210ENST00000482158 Q6ZS52 159 aa1.9□□□□□ -2.11
SF3B1-210ENST00000482158 HIST3H2BBQ8N257 126 aa1.9□□□□□ -2.11
SF3B1-210ENST00000482158 OR4B1Q8NGF8 309 aa1.9□□□□□ -2.11
SF3B1-210ENST00000482158 DIRC1Q969H9 104 aa1.9□□□□□ -2.11
SF3B1-210ENST00000482158 HIST1H2BLQ99880 126 aa1.9□□□□□ -2.11
SF3B1-210ENST00000482158 SPANXDQ9BXN6 97 aa1.9□□□□□ -2.11
SF3B1-210ENST00000482158 NPCDR1Q9BY65 106 aa1.9□□□□□ -2.11
SF3B1-210ENST00000482158 XAGE1AQ9HD64 81 aa1.9□□□□□ -2.11
SF3B1-210ENST00000482158 OSTCQ9NRP0 149 aa1.9□□□□□ -2.11
SF3B1-210ENST00000482158 RPL26L1Q9UNX3 145 aaKnown RBP1.9□□□□□ -2.11
SF3B1-210ENST00000482158 LSM2Q9Y333 95 aaKnown RBP1.9□□□□□ -2.11
SF3B1-210ENST00000482158 DNAJC15Q9Y5T4 150 aa1.9□□□□□ -2.11
SF3B1-210ENST00000482158 SMARCA4P51532 1647 aa1.9□□□□□ -2.11
SF3B1-210ENST00000482158 TNRC6AQ8NDV7 1962 aaKnown RBP1.9□□□□□ -2.11
SF3B1-210ENST00000482158 PTPRFP10586 1907 aa1.89□□□□□ -2.11
SF3B1-210ENST00000482158 CCDC88BA6NC98 1476 aa1.89□□□□□ -2.11
SF3B1-210ENST00000482158 MAGI2Q86UL8 1455 aa1.89□□□□□ -2.11
SF3B1-210ENST00000482158 MON2Q7Z3U7 1717 aa1.89□□□□□ -2.11
SF3B1-210ENST00000482158 OTOGLQ3ZCN5 2332 aa1.89□□□□□ -2.11
SF3B1-210ENST00000482158 PLXNA4Q9HCM2 1894 aa1.89□□□□□ -2.11
SF3B1-210ENST00000482158 TMSB15BA0A087X1C1 80 aa1.89□□□□□ -2.11
SF3B1-210ENST00000482158 TRGV10A0A0A0MS01 117 aa1.89□□□□□ -2.11
SF3B1-210ENST00000482158 A0A1W2PRS3 328 aa1.89□□□□□ -2.11
SF3B1-210ENST00000482158 OR51F1A6NGY5 319 aa1.89□□□□□ -2.11
SF3B1-210ENST00000482158 NPYP01303 97 aa1.89□□□□□ -2.11
SF3B1-210ENST00000482158 IGHV3-7P01780 117 aa1.89□□□□□ -2.11
SF3B1-210ENST00000482158 HBDP02042 147 aa1.89□□□□□ -2.11
SF3B1-210ENST00000482158 MT-ND6P03923 174 aa1.89□□□□□ -2.11
SF3B1-210ENST00000482158 IFITM1P13164 125 aa1.89□□□□□ -2.11
SF3B1-210ENST00000482158 CCL5P13501 91 aa1.89□□□□□ -2.11
SF3B1-210ENST00000482158 HIST1H4AP62805 103 aaKnown RBP1.89□□□□□ -2.11
SF3B1-210ENST00000482158 KLRD1Q13241 179 aa1.89□□□□□ -2.11
SF3B1-210ENST00000482158 ZNF791Q3KP31 576 aaPredicted RBP1.89□□□□□ -2.11
SF3B1-210ENST00000482158 KIAA2026Q5HYC2 2103 aa1.89□□□□□ -2.11
SF3B1-210ENST00000482158 CLLU1Q5K131 121 aa1.89□□□□□ -2.11
SF3B1-210ENST00000482158 Q6AWC8 147 aa1.89□□□□□ -2.11
SF3B1-210ENST00000482158 PATE2Q6UY27 113 aa1.89□□□□□ -2.11
SF3B1-210ENST00000482158 SOSTDC1Q6X4U4 206 aa1.89□□□□□ -2.11
SF3B1-210ENST00000482158 MIR17HGQ75NE6 70 aa1.89□□□□□ -2.11
SF3B1-210ENST00000482158 KCNRGQ8N5I3 272 aa1.89□□□□□ -2.11
SF3B1-210ENST00000482158 C3orf56Q8N813 242 aa1.89□□□□□ -2.11
SF3B1-210ENST00000482158 GINS4Q9BRT9 223 aa1.89□□□□□ -2.11
SF3B1-210ENST00000482158 AGPAT4-IT1Q9H0P7 198 aa1.89□□□□□ -2.11
SF3B1-210ENST00000482158 SLC35B3Q9H1N7 401 aa1.89□□□□□ -2.11
SF3B1-210ENST00000482158 NAA60Q9H7X0 242 aa1.89□□□□□ -2.11
SF3B1-210ENST00000482158 MED9Q9NWA0 146 aa1.89□□□□□ -2.11
SF3B1-210ENST00000482158 FKBP11Q9NYL4 201 aa1.89□□□□□ -2.11
SF3B1-210ENST00000482158 HHLA3Q9XRX5 114 aa1.89□□□□□ -2.11
SF3B1-210ENST00000482158 LTN1O94822 1766 aa1.89□□□□□ -2.11
SF3B1-210ENST00000482158 TOPAZ1Q8N9V7 1692 aa1.89□□□□□ -2.11
SF3B1-210ENST00000482158 FYCO1Q9BQS8 1478 aa1.88□□□□□ -2.11
SF3B1-210ENST00000482158 CPAMD8Q8IZJ3 1885 aa1.88□□□□□ -2.11
SF3B1-210ENST00000482158 TRPM7Q96QT4 1865 aa1.88□□□□□ -2.11
SF3B1-210ENST00000482158 USP54Q70EL1 1684 aa1.88□□□□□ -2.11
SF3B1-210ENST00000482158 TRBV20-1A0A075B6N2 111 aa1.88□□□□□ -2.11
SF3B1-210ENST00000482158 RER1O15258 196 aa1.88□□□□□ -2.11
SF3B1-210ENST00000482158 CD3DP04234 171 aa1.88□□□□□ -2.11
SF3B1-210ENST00000482158 Q56UQ5 140 aa1.88□□□□□ -2.11
SF3B1-210ENST00000482158 FAM74A1Q5RGS3 127 aa1.88□□□□□ -2.11
SF3B1-210ENST00000482158 C9orf153Q5TBE3 101 aa1.88□□□□□ -2.11
SF3B1-210ENST00000482158 LINC01545Q5VT33 79 aa1.88□□□□□ -2.11
SF3B1-210ENST00000482158 Q6ZUT4 128 aa1.88□□□□□ -2.11
SF3B1-210ENST00000482158 BPIFA4PQ86YQ2 179 aa1.88□□□□□ -2.11
SF3B1-210ENST00000482158 Q8N2B8 174 aa1.88□□□□□ -2.11
SF3B1-210ENST00000482158 SVBPQ8N300 66 aa1.88□□□□□ -2.11
SF3B1-210ENST00000482158 C10orf111Q8N326 155 aa1.88□□□□□ -2.11
SF3B1-210ENST00000482158 SIGLECL1Q8N7X8 197 aa1.88□□□□□ -2.11
SF3B1-210ENST00000482158 OTOSQ8NHW6 89 aa1.88□□□□□ -2.11
SF3B1-210ENST00000482158 LSM10Q969L4 123 aaKnown RBP1.88□□□□□ -2.11
SF3B1-210ENST00000482158 LINC00526Q96FQ7 95 aa1.88□□□□□ -2.11
SF3B1-210ENST00000482158 MCEEQ96PE7 176 aa1.88□□□□□ -2.11
SF3B1-210ENST00000482158 SEC11CQ9BY50 192 aa1.88□□□□□ -2.11
SF3B1-210ENST00000482158 NOP16Q9Y3C1 178 aaKnown RBP1.88□□□□□ -2.11
SF3B1-210ENST00000482158 CLIP1P30622 1438 aa1.88□□□□□ -2.11
SF3B1-210ENST00000482158 KIAA1549Q9HCM3 1950 aa1.88□□□□□ -2.11
SF3B1-210ENST00000482158 PLXNA2O75051 1894 aa1.88□□□□□ -2.11
SF3B1-210ENST00000482158 MALRD1Q5VYJ5 2156 aa1.88□□□□□ -2.11
SF3B1-210ENST00000482158 MYO18AQ92614 2054 aaKnown RBP1.87□□□□□ -2.11
SF3B1-210ENST00000482158 C3orf85A0A1B0GTC6 90 aa1.87□□□□□ -2.11
SF3B1-210ENST00000482158 TCRBV3S1A0A5B6 114 aa1.87□□□□□ -2.11
SF3B1-210ENST00000482158 ZNF705FA8MVS1 300 aaPredicted RBP1.87□□□□□ -2.11
SF3B1-210ENST00000482158 OOSP1A8MZH6 123 aa1.87□□□□□ -2.11
SF3B1-210ENST00000482158 TMEM262E9PQX1 116 aa1.87□□□□□ -2.11
SF3B1-210ENST00000482158 H3BT86 120 aa1.87□□□□□ -2.11
SF3B1-210ENST00000482158 OR1I1O60431 355 aa1.87□□□□□ -2.11
SF3B1-210ENST00000482158 MRPS14O60783 128 aaKnown RBP1.87□□□□□ -2.11
SF3B1-210ENST00000482158 PMP2P02689 132 aa1.87□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 102.2 ms