RNA–Protein interactions for RNA: ENST00000479541.1

RNF216-208, Transcript of ring finger protein 216, human

TSL 4

Gene RNF216, Length 580 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RNF216-208	ENST00000479541	GALM	Q96C23	342 aa		2.59	□□□□□ -1.99
RNF216-208	ENST00000479541	FXYD5	Q96DB9	178 aa		2.59	□□□□□ -1.99
RNF216-208	ENST00000479541	SLAMF6	Q96DU3	332 aa		2.59	□□□□□ -1.99
RNF216-208	ENST00000479541	YPEL2	Q96QA6	119 aa		2.59	□□□□□ -1.99
RNF216-208	ENST00000479541	TSPAN32	Q96QS1	320 aa		2.59	□□□□□ -1.99
RNF216-208	ENST00000479541	LINC01587	Q99440	93 aa		2.59	□□□□□ -1.99
RNF216-208	ENST00000479541	TBX5	Q99593	518 aa		2.59	□□□□□ -1.99
RNF216-208	ENST00000479541	DPY30	Q9C005	99 aa		2.59	□□□□□ -1.99
RNF216-208	ENST00000479541	EIF5A2	Q9GZV4	153 aa	Known RBP	2.59	□□□□□ -1.99
RNF216-208	ENST00000479541	GTSF1L	Q9H1H1	148 aa		2.59	□□□□□ -1.99
RNF216-208	ENST00000479541	TAF9B	Q9HBM6	251 aa		2.59	□□□□□ -1.99
RNF216-208	ENST00000479541	SPANXA1	Q9NS26	97 aa		2.59	□□□□□ -1.99
RNF216-208	ENST00000479541	TMEM106B	Q9NUM4	274 aa		2.59	□□□□□ -1.99
RNF216-208	ENST00000479541	ZNF391	Q9UJN7	358 aa		2.59	□□□□□ -1.99
RNF216-208	ENST00000479541	HHLA2	Q9UM44	414 aa		2.59	□□□□□ -1.99
RNF216-208	ENST00000479541	UFC1	Q9Y3C8	167 aa		2.59	□□□□□ -1.99
RNF216-208	ENST00000479541	ZNF706	Q9Y5V0	76 aa	Predicted RBP	2.59	□□□□□ -1.99
RNF216-208	ENST00000479541	FRAS1	Q86XX4	4008 aa		2.58	□□□□□ -2
RNF216-208	ENST00000479541	EML6	Q6ZMW3	1958 aa		2.58	□□□□□ -2
RNF216-208	ENST00000479541	RBM14-RBM4	A0A0A0MSL8	147 aa	Known RBP	2.58	□□□□□ -2
RNF216-208	ENST00000479541	IGHV2-26	A0A0B4J1V2	119 aa		2.58	□□□□□ -2
RNF216-208	ENST00000479541	TRAV1-2	A0A0B4J238	106 aa		2.58	□□□□□ -2
RNF216-208	ENST00000479541		A0A0G2JMM0	328 aa		2.58	□□□□□ -2
RNF216-208	ENST00000479541		A0A1W2PPB8	328 aa		2.58	□□□□□ -2
RNF216-208	ENST00000479541	IGLC7	A0M8Q6	106 aa		2.58	□□□□□ -2
RNF216-208	ENST00000479541	KIR3DP1	A8MWS1	328 aa		2.58	□□□□□ -2
RNF216-208	ENST00000479541	IGLL5	B9A064	214 aa		2.58	□□□□□ -2
RNF216-208	ENST00000479541		H0Y980	276 aa		2.58	□□□□□ -2
RNF216-208	ENST00000479541		J3QR89	54 aa		2.58	□□□□□ -2
RNF216-208	ENST00000479541	TAX1BP3	O14907	124 aa		2.58	□□□□□ -2
RNF216-208	ENST00000479541	PDCD6	O75340	191 aa		2.58	□□□□□ -2
RNF216-208	ENST00000479541	HYPM	O75409	117 aa		2.58	□□□□□ -2
RNF216-208	ENST00000479541	HLA-DQB2	P05538	268 aa		2.58	□□□□□ -2
RNF216-208	ENST00000479541	SERPINA7	P05543	415 aa		2.58	□□□□□ -2
RNF216-208	ENST00000479541	IGLC2	P0DOY2	106 aa		2.58	□□□□□ -2
RNF216-208	ENST00000479541	IGLC3	P0DOY3	106 aa		2.58	□□□□□ -2
RNF216-208	ENST00000479541	CEL	P19835	753 aa		2.58	□□□□□ -2
RNF216-208	ENST00000479541	GRPR	P30550	384 aa		2.58	□□□□□ -2
RNF216-208	ENST00000479541	PYCR1	P32322	319 aa		2.58	□□□□□ -2
RNF216-208	ENST00000479541	FOXA1	P55317	472 aa		2.58	□□□□□ -2
RNF216-208	ENST00000479541	DLX6	P56179	175 aa		2.58	□□□□□ -2
RNF216-208	ENST00000479541	TPPP2	P59282	170 aa		2.58	□□□□□ -2
RNF216-208	ENST00000479541	RUNX1	Q01196	453 aa		2.58	□□□□□ -2
RNF216-208	ENST00000479541	SSBP1	Q04837	148 aa	Known RBP	2.58	□□□□□ -2
RNF216-208	ENST00000479541	PLCXD2	Q0VAA5	305 aa		2.58	□□□□□ -2
RNF216-208	ENST00000479541	FOXF1	Q12946	379 aa		2.58	□□□□□ -2
RNF216-208	ENST00000479541	HIST3H3	Q16695	136 aa		2.58	□□□□□ -2
RNF216-208	ENST00000479541	SPATA45	Q537H7	98 aa		2.58	□□□□□ -2
RNF216-208	ENST00000479541	ACSM3	Q53FZ2	586 aa		2.58	□□□□□ -2
RNF216-208	ENST00000479541	TRMT12	Q53H54	448 aa	Known RBP	2.58	□□□□□ -2
RNF216-208	ENST00000479541	TMEM128	Q5BJH2	165 aa		2.58	□□□□□ -2
RNF216-208	ENST00000479541	FAM162B	Q5T6X4	162 aa		2.58	□□□□□ -2
RNF216-208	ENST00000479541	FAM78B	Q5VT40	261 aa		2.58	□□□□□ -2
RNF216-208	ENST00000479541	TMEM42	Q69YG0	159 aa		2.58	□□□□□ -2
RNF216-208	ENST00000479541	AMMECR1L	Q6DCA0	310 aa		2.58	□□□□□ -2
RNF216-208	ENST00000479541	DGAT2L6	Q6ZPD8	337 aa		2.58	□□□□□ -2
RNF216-208	ENST00000479541	OLIG3	Q7RTU3	272 aa		2.58	□□□□□ -2
RNF216-208	ENST00000479541	SMIM20	Q8N5G0	67 aa		2.58	□□□□□ -2
RNF216-208	ENST00000479541	C2orf73	Q8N5S3	287 aa	Predicted RBP	2.58	□□□□□ -2
RNF216-208	ENST00000479541	GATD1	Q8NB37	220 aa		2.58	□□□□□ -2
RNF216-208	ENST00000479541	GPR32P1	Q8NGA4	272 aa		2.58	□□□□□ -2
RNF216-208	ENST00000479541	OR52R1	Q8NGF1	315 aa		2.58	□□□□□ -2
RNF216-208	ENST00000479541	JOSD2	Q8TAC2	188 aa		2.58	□□□□□ -2
RNF216-208	ENST00000479541	BTF3L4	Q96K17	158 aa		2.58	□□□□□ -2
RNF216-208	ENST00000479541	AQP10	Q96PS8	301 aa		2.58	□□□□□ -2
RNF216-208	ENST00000479541	DOHH	Q9BU89	302 aa		2.58	□□□□□ -2
RNF216-208	ENST00000479541	NMES1	Q9C002	83 aa		2.58	□□□□□ -2
RNF216-208	ENST00000479541	BANF2	Q9H503	90 aa		2.58	□□□□□ -2
RNF216-208	ENST00000479541	MRPL16	Q9NX20	251 aa	Known RBP	2.58	□□□□□ -2
RNF216-208	ENST00000479541	HSPB8	Q9UJY1	196 aa		2.58	□□□□□ -2
RNF216-208	ENST00000479541	ERG28	Q9UKR5	140 aa		2.58	□□□□□ -2
RNF216-208	ENST00000479541	TRAPPC2L	Q9UL33	140 aa		2.58	□□□□□ -2
RNF216-208	ENST00000479541	DSPP	Q9NZW4	1301 aa		2.58	□□□□□ -2
RNF216-208	ENST00000479541	TRAV38-1	A0A0B4J264	116 aa		2.57	□□□□□ -2
RNF216-208	ENST00000479541		A0A0J9YY10	115 aa		2.57	□□□□□ -2
RNF216-208	ENST00000479541		A0A1B0GX78	115 aa		2.57	□□□□□ -2
RNF216-208	ENST00000479541	ODAM	A1E959	279 aa		2.57	□□□□□ -2
RNF216-208	ENST00000479541	MAP1LC3B2	A6NCE7	125 aa		2.57	□□□□□ -2
RNF216-208	ENST00000479541	HBZ	P02008	142 aa		2.57	□□□□□ -2
RNF216-208	ENST00000479541	SRP19	P09132	144 aa	Known RBP	2.57	□□□□□ -2
RNF216-208	ENST00000479541	AKAIN1	P0CW23	69 aa		2.57	□□□□□ -2
RNF216-208	ENST00000479541	PPIB	P23284	216 aa	Known RBP	2.57	□□□□□ -2
RNF216-208	ENST00000479541	S100A3	P33764	101 aa		2.57	□□□□□ -2
RNF216-208	ENST00000479541	GUCA1A	P43080	201 aa	Predicted RBP	2.57	□□□□□ -2
RNF216-208	ENST00000479541	GNG4	P50150	75 aa		2.57	□□□□□ -2
RNF216-208	ENST00000479541	HLA-DRB3	P79483	266 aa		2.57	□□□□□ -2
RNF216-208	ENST00000479541	IAH1	Q2TAA2	248 aa	Predicted RBP	2.57	□□□□□ -2
RNF216-208	ENST00000479541	KRTAP13-2	Q52LG2	175 aa		2.57	□□□□□ -2
RNF216-208	ENST00000479541	KPRP	Q5T749	579 aa	Predicted RBP	2.57	□□□□□ -2
RNF216-208	ENST00000479541	ZNF322	Q6U7Q0	402 aa	Predicted RBP	2.57	□□□□□ -2
RNF216-208	ENST00000479541	DPPA3	Q6W0C5	159 aa		2.57	□□□□□ -2
RNF216-208	ENST00000479541	AMN1	Q8IY45	258 aa		2.57	□□□□□ -2
RNF216-208	ENST00000479541	C1orf174	Q8IYL3	243 aa		2.57	□□□□□ -2
RNF216-208	ENST00000479541	MUC15	Q8N387	334 aa		2.57	□□□□□ -2
RNF216-208	ENST00000479541	OR4D11	Q8NGI4	311 aa		2.57	□□□□□ -2
RNF216-208	ENST00000479541	ZNF418	Q8TF45	676 aa	Predicted RBP	2.57	□□□□□ -2
RNF216-208	ENST00000479541	S100A16	Q96FQ6	103 aa	Known RBP	2.57	□□□□□ -2
RNF216-208	ENST00000479541	DERL1	Q9BUN8	251 aa		2.57	□□□□□ -2
RNF216-208	ENST00000479541	SNRNP25	Q9BV90	132 aa	Known RBP	2.57	□□□□□ -2
RNF216-208	ENST00000479541	MAP1LC3B	Q9GZQ8	125 aa		2.57	□□□□□ -2

Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms