RNA–Protein interactions for RNA: ENST00000478938.1

SDF4-206, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,591 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-206ENST00000478938 NRGNQ92686 78 aa16.47■□□□□ 0.23
SDF4-206ENST00000478938 C21orf62Q9NYP8 219 aa16.47■□□□□ 0.23
SDF4-206ENST00000478938 CADP27708 2225 aa16.47■□□□□ 0.23
SDF4-206ENST00000478938 TEX49A0A1B0GTD5 131 aa16.46■□□□□ 0.23
SDF4-206ENST00000478938 LYPD1Q8N2G4 141 aa16.46■□□□□ 0.23
SDF4-206ENST00000478938 C10orf126Q8N4M7 172 aa16.46■□□□□ 0.23
SDF4-206ENST00000478938 FAM57AQ8TBR7 257 aa16.46■□□□□ 0.23
SDF4-206ENST00000478938 TMEM126AQ9H061 195 aa16.46■□□□□ 0.23
SDF4-206ENST00000478938 RAI1Q7Z5J4 1906 aaPredicted RBP16.46■□□□□ 0.23
SDF4-206ENST00000478938 H3BRN7 92 aa16.46■□□□□ 0.23
SDF4-206ENST00000478938 K7ESF4 209 aa16.46■□□□□ 0.23
SDF4-206ENST00000478938 IGHG4P01861 327 aa16.46■□□□□ 0.23
SDF4-206ENST00000478938 IGKV3-15P01624 115 aa16.45■□□□□ 0.22
SDF4-206ENST00000478938 DEFB127Q9H1M4 99 aa16.45■□□□□ 0.22
SDF4-206ENST00000478938 IGHV3-72A0A0B4J1Y9 119 aa16.45■□□□□ 0.22
SDF4-206ENST00000478938 TRAV12-1A0A0B4J245 112 aa16.45■□□□□ 0.22
SDF4-206ENST00000478938 SPRY3O43610 288 aa16.45■□□□□ 0.22
SDF4-206ENST00000478938 LINC00694P0DN24 101 aa16.45■□□□□ 0.22
SDF4-206ENST00000478938 MZT1Q08AG7 82 aa16.45■□□□□ 0.22
SDF4-206ENST00000478938 PVRIGQ6DKI7 326 aa16.45■□□□□ 0.22
SDF4-206ENST00000478938 GAFA1Q96PS6 74 aa16.45■□□□□ 0.22
SDF4-206ENST00000478938 IGKV1-17P01599 117 aa16.44■□□□□ 0.22
SDF4-206ENST00000478938 COX6B1P14854 86 aa16.44■□□□□ 0.22
SDF4-206ENST00000478938 ZGRF1Q86YA3 2104 aa16.44■□□□□ 0.22
SDF4-206ENST00000478938 DEFB123Q8N688 67 aa16.44■□□□□ 0.22
SDF4-206ENST00000478938 SPANXA1Q9NS26 97 aa16.44■□□□□ 0.22
SDF4-206ENST00000478938 LOC107984640A0A0U1RRK4 108 aa16.44■□□□□ 0.22
SDF4-206ENST00000478938 MRPS12O15235 138 aaKnown RBP16.44■□□□□ 0.22
SDF4-206ENST00000478938 LHBP01229 141 aa16.44■□□□□ 0.22
SDF4-206ENST00000478938 VMA21Q3ZAQ7 101 aa16.44■□□□□ 0.22
SDF4-206ENST00000478938 NRACQ8N912 160 aa16.44■□□□□ 0.22
SDF4-206ENST00000478938 CXCL12P48061 93 aa16.43■□□□□ 0.22
SDF4-206ENST00000478938 FOXC1Q12948 553 aa16.43■□□□□ 0.22
SDF4-206ENST00000478938 C5orf47Q569G3 176 aa16.43■□□□□ 0.22
SDF4-206ENST00000478938 CNFNQ9BYD5 112 aa16.43■□□□□ 0.22
SDF4-206ENST00000478938 ZFHX4Q86UP3 3567 aa16.43■□□□□ 0.22
SDF4-206ENST00000478938 CEACAM4O75871 244 aa16.43■□□□□ 0.22
SDF4-206ENST00000478938 CCL3L1P16619 93 aa16.43■□□□□ 0.22
SDF4-206ENST00000478938 PLGLAQ15195 96 aa16.43■□□□□ 0.22
SDF4-206ENST00000478938 Q6ZS46 218 aa16.43■□□□□ 0.22
SDF4-206ENST00000478938 LINC00574Q9H8X3 128 aa16.43■□□□□ 0.22
SDF4-206ENST00000478938 TRAV2A0A0B4J234 112 aa16.42■□□□□ 0.22
SDF4-206ENST00000478938 ENSAO43768 121 aaKnown RBP16.42■□□□□ 0.22
SDF4-206ENST00000478938 CD40P25942 277 aa16.42■□□□□ 0.22
SDF4-206ENST00000478938 RPL27AP46776 148 aaKnown RBP16.42■□□□□ 0.22
SDF4-206ENST00000478938 H7C2G1 150 aa16.42■□□□□ 0.22
SDF4-206ENST00000478938 PSMG3-AS1Q96PY0 264 aa16.42■□□□□ 0.22
SDF4-206ENST00000478938 SCGB3A1Q96QR1 104 aa16.42■□□□□ 0.22
SDF4-206ENST00000478938 PRO1854Q9UHT4 67 aa16.42■□□□□ 0.22
SDF4-206ENST00000478938 A0A0J9YY99 117 aa16.41■□□□□ 0.22
SDF4-206ENST00000478938 IGFL4Q6B9Z1 124 aa16.41■□□□□ 0.22
SDF4-206ENST00000478938 NEXN-AS1Q8NBZ9 246 aa16.41■□□□□ 0.22
SDF4-206ENST00000478938 CNTFRP26992 372 aa16.4■□□□□ 0.22
SDF4-206ENST00000478938 ELANEP08246 267 aa16.4■□□□□ 0.22
SDF4-206ENST00000478938 SPRR3Q9UBC9 169 aa16.4■□□□□ 0.22
SDF4-206ENST00000478938 IGHV3-30P01768 117 aa16.39■□□□□ 0.22
SDF4-206ENST00000478938 IGHV3-30-5P0DP03 117 aa16.39■□□□□ 0.22
SDF4-206ENST00000478938 KALRNO60229 2985 aa16.38■□□□□ 0.21
SDF4-206ENST00000478938 WT1P19544 449 aaPredicted RBP16.38■□□□□ 0.21
SDF4-206ENST00000478938 DNAJC30Q96LL9 226 aa16.38■□□□□ 0.21
SDF4-206ENST00000478938 HLA-DMBP28068 263 aa16.38■□□□□ 0.21
SDF4-206ENST00000478938 GLRXP35754 106 aa16.38■□□□□ 0.21
SDF4-206ENST00000478938 COX8CQ7Z4L0 72 aa16.38■□□□□ 0.21
SDF4-206ENST00000478938 CNEP1R1Q8N9A8 125 aa16.38■□□□□ 0.21
SDF4-206ENST00000478938 TM4SF5O14894 197 aa16.37■□□□□ 0.21
SDF4-206ENST00000478938 TIMM23O14925 209 aa16.37■□□□□ 0.21
SDF4-206ENST00000478938 IGHV1-18A0A0C4DH31 117 aa16.37■□□□□ 0.21
SDF4-206ENST00000478938 I3L2K1 104 aa16.37■□□□□ 0.21
SDF4-206ENST00000478938 RPL7P18124 248 aaKnown RBP16.37■□□□□ 0.21
SDF4-206ENST00000478938 MRPL23Q16540 153 aaKnown RBP16.37■□□□□ 0.21
SDF4-206ENST00000478938 ZNF491Q8N8L2 437 aa16.37■□□□□ 0.21
SDF4-206ENST00000478938 RNF125Q96EQ8 232 aa16.37■□□□□ 0.21
SDF4-206ENST00000478938 DUSP14O95147 198 aaKnown RBP16.36■□□□□ 0.21
SDF4-206ENST00000478938 ZNF56Q15929 161 aa16.36■□□□□ 0.21
SDF4-206ENST00000478938 EIF4EBP3O60516 100 aaPredicted RBP16.36■□□□□ 0.21
SDF4-206ENST00000478938 IGHV4-39P01824 125 aa16.36■□□□□ 0.21
SDF4-206ENST00000478938 Q6ZT83 130 aa16.36■□□□□ 0.21
SDF4-206ENST00000478938 BAALCQ8WXS3 180 aa16.36■□□□□ 0.21
SDF4-206ENST00000478938 TMEM190Q8WZ59 177 aa16.36■□□□□ 0.21
SDF4-206ENST00000478938 SPXQ9BT56 116 aa16.36■□□□□ 0.21
SDF4-206ENST00000478938 S4R3C0 116 aa16.36■□□□□ 0.21
SDF4-206ENST00000478938 PF4V1P10720 104 aa16.35■□□□□ 0.21
SDF4-206ENST00000478938 EMP1P54849 157 aa16.35■□□□□ 0.21
SDF4-206ENST00000478938 OOSP1A8MZH6 123 aa16.34■□□□□ 0.21
SDF4-206ENST00000478938 LINC01620Q4KN68 170 aa16.34■□□□□ 0.21
SDF4-206ENST00000478938 SMIM9A6NGZ8 99 aa16.34■□□□□ 0.21
SDF4-206ENST00000478938 LGALS9O00182 355 aa16.34■□□□□ 0.21
SDF4-206ENST00000478938 TCF15Q12870 199 aa16.34■□□□□ 0.21
SDF4-206ENST00000478938 TMEM30BQ3MIR4 351 aa16.34■□□□□ 0.21
SDF4-206ENST00000478938 RNF7Q9UBF6 113 aa16.34■□□□□ 0.21
SDF4-206ENST00000478938 TEX22C9J3V5 150 aa16.33■□□□□ 0.21
SDF4-206ENST00000478938 H3BMM0 161 aa16.33■□□□□ 0.21
SDF4-206ENST00000478938 RPL13AP40429 203 aaKnown RBP16.33■□□□□ 0.21
SDF4-206ENST00000478938 SAP25Q8TEE9 199 aa16.33■□□□□ 0.21
SDF4-206ENST00000478938 CFHR4Q92496 578 aa16.33■□□□□ 0.21
SDF4-206ENST00000478938 UBE2WQ96B02 151 aa16.33■□□□□ 0.21
SDF4-206ENST00000478938 TOMM6Q96B49 74 aa16.33■□□□□ 0.2
SDF4-206ENST00000478938 SMG1Q96Q15 3661 aaKnown RBP16.33■□□□□ 0.2
SDF4-206ENST00000478938 SMIM2Q9BVW6 85 aa16.33■□□□□ 0.2
SDF4-206ENST00000478938 MED13Q9UHV7 2174 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms