RNA–Protein interactions for RNA: ENST00000478658.1

USF3-202, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 8,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-202ENST00000478658 SEM1Q6ZVN7 128 aa4.38□□□□□ -1.71
USF3-202ENST00000478658 COX7B2Q8TF08 81 aa4.38□□□□□ -1.71
USF3-202ENST00000478658 H3BT86 120 aa4.38□□□□□ -1.71
USF3-202ENST00000478658 AMELYQ99218 206 aa4.38□□□□□ -1.71
USF3-202ENST00000478658 CRYGSP22914 178 aa4.38□□□□□ -1.71
USF3-202ENST00000478658 WDR86Q86TI4 376 aa4.38□□□□□ -1.71
USF3-202ENST00000478658 FGF23Q9GZV9 251 aaPredicted RBP4.38□□□□□ -1.71
USF3-202ENST00000478658 PRDM6Q9NQX0 595 aa4.38□□□□□ -1.71
USF3-202ENST00000478658 PTPRSQ13332 1948 aa4.38□□□□□ -1.71
USF3-202ENST00000478658 MSMBP08118 114 aa4.37□□□□□ -1.71
USF3-202ENST00000478658 CELA2BP08218 269 aaPredicted RBP4.37□□□□□ -1.71
USF3-202ENST00000478658 ZNF474Q6S9Z5 364 aaPredicted RBP4.37□□□□□ -1.71
USF3-202ENST00000478658 RHPN1-AS1Q9BWJ2 59 aa4.37□□□□□ -1.71
USF3-202ENST00000478658 IGKV2D-26A0A0A0MRZ7 120 aa4.37□□□□□ -1.71
USF3-202ENST00000478658 PRR4Q16378 134 aa4.37□□□□□ -1.71
USF3-202ENST00000478658 MORN2Q502X0 79 aa4.37□□□□□ -1.71
USF3-202ENST00000478658 UFSP1Q6NVU6 142 aa4.37□□□□□ -1.71
USF3-202ENST00000478658 NHSQ6T4R5 1651 aa4.37□□□□□ -1.71
USF3-202ENST00000478658 C9orf85Q96MD7 179 aa4.37□□□□□ -1.71
USF3-202ENST00000478658 ADAMTS9Q9P2N4 1935 aa4.37□□□□□ -1.71
USF3-202ENST00000478658 TANC1Q9C0D5 1861 aa4.37□□□□□ -1.71
USF3-202ENST00000478658 C5orf67F2Z3F1 127 aa4.37□□□□□ -1.71
USF3-202ENST00000478658 PRSS41Q7RTY9 318 aa4.37□□□□□ -1.71
USF3-202ENST00000478658 LINC01565O15544 149 aa4.37□□□□□ -1.71
USF3-202ENST00000478658 HILS1P60008 231 aa4.37□□□□□ -1.71
USF3-202ENST00000478658 LIMD2Q9BT23 127 aa4.37□□□□□ -1.71
USF3-202ENST00000478658 IMUPQ9GZP8 106 aa4.37□□□□□ -1.71
USF3-202ENST00000478658 PTPRQQ9UMZ3 2332 aa4.37□□□□□ -1.71
USF3-202ENST00000478658 PCNX1Q96RV3 2341 aa4.37□□□□□ -1.71
USF3-202ENST00000478658 K7EQD1 137 aa4.37□□□□□ -1.71
USF3-202ENST00000478658 FAM110DQ8TAY7 271 aaPredicted RBP4.37□□□□□ -1.71
USF3-202ENST00000478658 MSRB2Q9Y3D2 182 aa4.37□□□□□ -1.71
USF3-202ENST00000478658 NUP210Q8TEM1 1887 aaPredicted RBP4.37□□□□□ -1.71
USF3-202ENST00000478658 NUP35Q8NFH5 326 aa4.37□□□□□ -1.71
USF3-202ENST00000478658 TMEM14CQ9P0S9 112 aa4.37□□□□□ -1.71
USF3-202ENST00000478658 PLCE1Q9P212 2302 aa4.37□□□□□ -1.71
USF3-202ENST00000478658 SMIM9A6NGZ8 99 aa4.37□□□□□ -1.71
USF3-202ENST00000478658 H3BUX3 64 aa4.37□□□□□ -1.71
USF3-202ENST00000478658 K7EP34 96 aa4.37□□□□□ -1.71
USF3-202ENST00000478658 SNURFQ9Y675 71 aa4.37□□□□□ -1.71
USF3-202ENST00000478658 IGHV3-49A0A0A0MS15 119 aa4.36□□□□□ -1.71
USF3-202ENST00000478658 J3QQQ9 107 aa4.36□□□□□ -1.71
USF3-202ENST00000478658 SDIM1Q6ZPB5 146 aa4.36□□□□□ -1.71
USF3-202ENST00000478658 PCP2Q8IVA1 136 aa4.36□□□□□ -1.71
USF3-202ENST00000478658 CXCL6P80162 114 aa4.36□□□□□ -1.71
USF3-202ENST00000478658 NLRC5Q86WI3 1866 aa4.36□□□□□ -1.71
USF3-202ENST00000478658 IGHV3-23P01764 117 aa4.36□□□□□ -1.71
USF3-202ENST00000478658 RNF144BQ7Z419 303 aa4.36□□□□□ -1.71
USF3-202ENST00000478658 C14orf178Q8N769 122 aaPredicted RBP4.36□□□□□ -1.71
USF3-202ENST00000478658 SPAARA0A1B0GVQ0 90 aa4.36□□□□□ -1.71
USF3-202ENST00000478658 TMEM89A2RUT3 159 aa4.36□□□□□ -1.71
USF3-202ENST00000478658 MED14OSP0DP75 135 aa4.36□□□□□ -1.71
USF3-202ENST00000478658 KIAA0087Q14695 138 aa4.36□□□□□ -1.71
USF3-202ENST00000478658 TMEM263Q8WUH6 116 aaKnown RBP4.36□□□□□ -1.71
USF3-202ENST00000478658 C8orf49Q96NF6 230 aa4.36□□□□□ -1.71
USF3-202ENST00000478658 PLXNA3P51805 1871 aa4.36□□□□□ -1.71
USF3-202ENST00000478658 TRAV12-2A0A075B6T6 113 aa4.36□□□□□ -1.71
USF3-202ENST00000478658 F8W735 103 aaPredicted RBP4.36□□□□□ -1.71
USF3-202ENST00000478658 F8WDY8 70 aa4.36□□□□□ -1.71
USF3-202ENST00000478658 UQCRQO14949 82 aa4.36□□□□□ -1.71
USF3-202ENST00000478658 COX6A1P12074 109 aa4.36□□□□□ -1.71
USF3-202ENST00000478658 Q6ZUT4 128 aa4.36□□□□□ -1.71
USF3-202ENST00000478658 FAM19A2Q8N3H0 131 aa4.36□□□□□ -1.71
USF3-202ENST00000478658 CD177Q8N6Q3 437 aa4.36□□□□□ -1.71
USF3-202ENST00000478658 C5orf66Q9H5L9 145 aa4.36□□□□□ -1.71
USF3-202ENST00000478658 ADAMTSL1Q8N6G6 1762 aa4.36□□□□□ -1.71
USF3-202ENST00000478658 J3QKU1 62 aa4.36□□□□□ -1.71
USF3-202ENST00000478658 CECR9P0C854 216 aa4.36□□□□□ -1.71
USF3-202ENST00000478658 COL9A3Q14050 684 aaPredicted RBP4.36□□□□□ -1.71
USF3-202ENST00000478658 MIR17HGQ75NE6 70 aa4.36□□□□□ -1.71
USF3-202ENST00000478658 UCN2Q96RP3 112 aa4.36□□□□□ -1.71
USF3-202ENST00000478658 IGHV1-8P0DP01 117 aa4.35□□□□□ -1.71
USF3-202ENST00000478658 RPL39P5Q59GN2 51 aa4.35□□□□□ -1.71
USF3-202ENST00000478658 C19orf48Q6RUI8 117 aa4.35□□□□□ -1.71
USF3-202ENST00000478658 C2orf66Q6UXQ4 117 aa4.35□□□□□ -1.71
USF3-202ENST00000478658 IGHV3-73A0A0B4J1V6 119 aa4.35□□□□□ -1.71
USF3-202ENST00000478658 IGHV1-3A0A0C4DH29 117 aa4.35□□□□□ -1.71
USF3-202ENST00000478658 A0A1W2PPM0 123 aa4.35□□□□□ -1.71
USF3-202ENST00000478658 SDHAF1A6NFY7 115 aa4.35□□□□□ -1.71
USF3-202ENST00000478658 LYPD3O95274 346 aa4.35□□□□□ -1.71
USF3-202ENST00000478658 LINC01560Q8TB33 94 aa4.35□□□□□ -1.71
USF3-202ENST00000478658 RNF126Q9BV68 326 aa4.35□□□□□ -1.71
USF3-202ENST00000478658 NUP210LQ5VU65 1888 aa4.35□□□□□ -1.71
USF3-202ENST00000478658 FAM110AQ9BQ89 295 aa4.35□□□□□ -1.71
USF3-202ENST00000478658 SND1-IT1Q9HBX3 110 aa4.35□□□□□ -1.71
USF3-202ENST00000478658 SIPA1L1O43166 1804 aa4.35□□□□□ -1.71
USF3-202ENST00000478658 NOTCH4Q99466 2003 aa4.35□□□□□ -1.71
USF3-202ENST00000478658 ZNF831Q5JPB2 1677 aa4.35□□□□□ -1.71
USF3-202ENST00000478658 IGHV3OR16-10A0A075B7F0 116 aa4.35□□□□□ -1.71
USF3-202ENST00000478658 TRBV6-7A0A0A0MS04 114 aa4.35□□□□□ -1.71
USF3-202ENST00000478658 CRYGBP07316 175 aa4.35□□□□□ -1.71
USF3-202ENST00000478658 Q5BKY6 102 aa4.35□□□□□ -1.71
USF3-202ENST00000478658 MORN5Q5VZ52 161 aa4.35□□□□□ -1.71
USF3-202ENST00000478658 Q8N9W7 124 aa4.35□□□□□ -1.71
USF3-202ENST00000478658 RNASE7Q9H1E1 156 aaKnown RBP4.35□□□□□ -1.71
USF3-202ENST00000478658 SELENOKQ9Y6D0 94 aa4.35□□□□□ -1.71
USF3-202ENST00000478658 A0A0J9YW62 118 aa4.35□□□□□ -1.71
USF3-202ENST00000478658 A0A1B0GXF2 115 aa4.35□□□□□ -1.71
USF3-202ENST00000478658 IGKV1D-12P01611 117 aa4.35□□□□□ -1.71
USF3-202ENST00000478658 ARMS2P0C7Q2 107 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms