RNA–Protein interactions for RNA: ENST00000478359.5

TRAF3IP3-213, Transcript of TRAF3 interacting protein 3, humanhuman

TSL 1 (best)

Gene TRAF3IP3, Length 1,860 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP3-213ENST00000478359 KIR2DL5BA0A0G2JPC4 375 aa9.46□□□□□ -0.9
TRAF3IP3-213ENST00000478359 FAM181BA6NEQ2 426 aa9.46□□□□□ -0.9
TRAF3IP3-213ENST00000478359 RPLP1P05386 114 aaKnown RBP9.46□□□□□ -0.9
TRAF3IP3-213ENST00000478359 C3orf79P0CE67 100 aa9.46□□□□□ -0.9
TRAF3IP3-213ENST00000478359 BTF3P20290 206 aaKnown RBP9.46□□□□□ -0.9
TRAF3IP3-213ENST00000478359 CACNG7P62955 275 aa9.46□□□□□ -0.9
TRAF3IP3-213ENST00000478359 SMIM15Q7Z3B0 74 aa9.46□□□□□ -0.9
TRAF3IP3-213ENST00000478359 KIR2DL5AQ8N109 375 aa9.46□□□□□ -0.9
TRAF3IP3-213ENST00000478359 OR8A1Q8NGG7 326 aa9.46□□□□□ -0.9
TRAF3IP3-213ENST00000478359 C20orf173Q96LM9 149 aa9.46□□□□□ -0.9
TRAF3IP3-213ENST00000478359 VAMP8Q9BV40 100 aa9.46□□□□□ -0.9
TRAF3IP3-213ENST00000478359 PRO1933Q9H354 126 aa9.46□□□□□ -0.9
TRAF3IP3-213ENST00000478359 TMEM213A2RRL7 107 aa9.45□□□□□ -0.9
TRAF3IP3-213ENST00000478359 APRG1Q8IVJ8 170 aa9.45□□□□□ -0.9
TRAF3IP3-213ENST00000478359 AP5S1Q9NUS5 200 aa9.45□□□□□ -0.9
TRAF3IP3-213ENST00000478359 LRRK2Q5S007 2527 aa9.45□□□□□ -0.9
TRAF3IP3-213ENST00000478359 IGKV3D-20A0A0C4DH25 116 aa9.45□□□□□ -0.9
TRAF3IP3-213ENST00000478359 LEPROTL1O95214 131 aa9.45□□□□□ -0.9
TRAF3IP3-213ENST00000478359 PRSS3P2Q8NHM4 247 aa9.45□□□□□ -0.9
TRAF3IP3-213ENST00000478359 URB1-AS1Q96HZ7 61 aa9.45□□□□□ -0.9
TRAF3IP3-213ENST00000478359 FAM19A4Q96LR4 140 aa9.45□□□□□ -0.9
TRAF3IP3-213ENST00000478359 C20orf144Q9BQM9 153 aa9.45□□□□□ -0.9
TRAF3IP3-213ENST00000478359 IGHV4-4A0A075B6R2 117 aa9.44□□□□□ -0.9
TRAF3IP3-213ENST00000478359 M0QZ24 198 aa9.44□□□□□ -0.9
TRAF3IP3-213ENST00000478359 SNAI2O43623 268 aa9.44□□□□□ -0.9
TRAF3IP3-213ENST00000478359 SNRPD3P62318 126 aaKnown RBP9.44□□□□□ -0.9
TRAF3IP3-213ENST00000478359 SCGB2A2Q13296 93 aa9.44□□□□□ -0.9
TRAF3IP3-213ENST00000478359 FA2HQ7L5A8 372 aa9.44□□□□□ -0.9
TRAF3IP3-213ENST00000478359 ZNF575Q86XF7 245 aa9.44□□□□□ -0.9
TRAF3IP3-213ENST00000478359 DCANP1Q8TF63 244 aa9.44□□□□□ -0.9
TRAF3IP3-213ENST00000478359 PRELID3AQ96N28 172 aa9.44□□□□□ -0.9
TRAF3IP3-213ENST00000478359 TMEM70Q9BUB7 260 aa9.44□□□□□ -0.9
TRAF3IP3-213ENST00000478359 HSPB8Q9UJY1 196 aa9.44□□□□□ -0.9
TRAF3IP3-213ENST00000478359 UTP20O75691 2785 aaKnown RBP9.44□□□□□ -0.9
TRAF3IP3-213ENST00000478359 CELSR2Q9HCU4 2923 aa9.43□□□□□ -0.9
TRAF3IP3-213ENST00000478359 IGHV1-24A0A0C4DH33 117 aa9.43□□□□□ -0.9
TRAF3IP3-213ENST00000478359 C20orf202A1L168 122 aa9.43□□□□□ -0.9
TRAF3IP3-213ENST00000478359 D6R8Y8 96 aa9.43□□□□□ -0.9
TRAF3IP3-213ENST00000478359 CRXO43186 299 aaPredicted RBP9.43□□□□□ -0.9
TRAF3IP3-213ENST00000478359 MED14OSP0DP75 135 aa9.43□□□□□ -0.9
TRAF3IP3-213ENST00000478359 CD33P20138 364 aa9.43□□□□□ -0.9
TRAF3IP3-213ENST00000478359 CKS2P33552 79 aa9.43□□□□□ -0.9
TRAF3IP3-213ENST00000478359 MRPL51Q4U2R6 128 aaKnown RBP9.43□□□□□ -0.9
TRAF3IP3-213ENST00000478359 LBHQ53QV2 105 aaPredicted RBP9.43□□□□□ -0.9
TRAF3IP3-213ENST00000478359 AMN1Q8IY45 258 aa9.43□□□□□ -0.9
TRAF3IP3-213ENST00000478359 WFDC12Q8WWY7 111 aa9.43□□□□□ -0.9
TRAF3IP3-213ENST00000478359 NDUFAF3Q9BU61 184 aa9.43□□□□□ -0.9
TRAF3IP3-213ENST00000478359 C2orf70A6NJV1 201 aa9.42□□□□□ -0.9
TRAF3IP3-213ENST00000478359 C10orf99Q6UWK7 81 aa9.42□□□□□ -0.9
TRAF3IP3-213ENST00000478359 ZFAND2AQ8N6M9 145 aa9.42□□□□□ -0.9
TRAF3IP3-213ENST00000478359 WFDC11Q8NEX6 87 aa9.42□□□□□ -0.9
TRAF3IP3-213ENST00000478359 ODF3Q96PU9 254 aa9.42□□□□□ -0.9
TRAF3IP3-213ENST00000478359 FOXC2Q99958 501 aa9.42□□□□□ -0.9
TRAF3IP3-213ENST00000478359 CELSR1Q9NYQ6 3014 aa9.42□□□□□ -0.9
TRAF3IP3-213ENST00000478359 Q8N976 141 aa9.42□□□□□ -0.9
TRAF3IP3-213ENST00000478359 OR10AG1Q8NH19 301 aa9.42□□□□□ -0.9
TRAF3IP3-213ENST00000478359 TENM4Q6N022 2769 aa9.42□□□□□ -0.9
TRAF3IP3-213ENST00000478359 DOPEY2Q9Y3R5 2298 aa9.41□□□□□ -0.9
TRAF3IP3-213ENST00000478359 ZFHX3Q15911 3703 aa9.41□□□□□ -0.9
TRAF3IP3-213ENST00000478359 HOXD3P31249 432 aaPredicted RBP9.41□□□□□ -0.9
TRAF3IP3-213ENST00000478359 KLHDC1Q8N7A1 406 aa9.41□□□□□ -0.9
TRAF3IP3-213ENST00000478359 MAP1LC3CQ9BXW4 147 aa9.41□□□□□ -0.9
TRAF3IP3-213ENST00000478359 MS4A6AQ9H2W1 248 aa9.41□□□□□ -0.9
TRAF3IP3-213ENST00000478359 C11orf21Q9P2W6 132 aa9.41□□□□□ -0.9
TRAF3IP3-213ENST00000478359 IGHV4OR15-8A0A075B7B6 117 aa9.4□□□□□ -0.9
TRAF3IP3-213ENST00000478359 A0A087WW49 117 aa9.4□□□□□ -0.9
TRAF3IP3-213ENST00000478359 TCF21O43680 179 aa9.4□□□□□ -0.9
TRAF3IP3-213ENST00000478359 CSN3P07498 182 aa9.4□□□□□ -0.9
TRAF3IP3-213ENST00000478359 SPANXN1Q5VSR9 72 aa9.4□□□□□ -0.9
TRAF3IP3-213ENST00000478359 MRPL52Q86TS9 123 aaKnown RBP9.4□□□□□ -0.9
TRAF3IP3-213ENST00000478359 C14orf144Q96I85 54 aa9.4□□□□□ -0.9
TRAF3IP3-213ENST00000478359 PEMTQ9UBM1 199 aa9.4□□□□□ -0.9
TRAF3IP3-213ENST00000478359 RNF114Q9Y508 228 aa9.4□□□□□ -0.9
TRAF3IP3-213ENST00000478359 IGKV3-7A0A075B6H7 116 aa9.4□□□□□ -0.91
TRAF3IP3-213ENST00000478359 ASIPP42127 132 aa9.4□□□□□ -0.91
TRAF3IP3-213ENST00000478359 SYNJ2BPP57105 145 aa9.4□□□□□ -0.91
TRAF3IP3-213ENST00000478359 EBLN2Q6P2I7 272 aa9.4□□□□□ -0.91
TRAF3IP3-213ENST00000478359 PET117Q6UWS5 81 aa9.4□□□□□ -0.91
TRAF3IP3-213ENST00000478359 C4orf3Q8WVX3 66 aa9.4□□□□□ -0.91
TRAF3IP3-213ENST00000478359 MAP1LC3AQ9H492 121 aa9.4□□□□□ -0.91
TRAF3IP3-213ENST00000478359 CSPG4Q6UVK1 2322 aa9.4□□□□□ -0.91
TRAF3IP3-213ENST00000478359 CSMD2Q7Z408 3487 aa9.4□□□□□ -0.91
TRAF3IP3-213ENST00000478359 KLLNB2CW77 178 aa9.39□□□□□ -0.91
TRAF3IP3-213ENST00000478359 LINC01619G3V211 115 aa9.39□□□□□ -0.91
TRAF3IP3-213ENST00000478359 K7EQG2 157 aa9.39□□□□□ -0.91
TRAF3IP3-213ENST00000478359 CD5LO43866 347 aa9.39□□□□□ -0.91
TRAF3IP3-213ENST00000478359 LEPP41159 167 aa9.39□□□□□ -0.91
TRAF3IP3-213ENST00000478359 SSTP61278 116 aa9.39□□□□□ -0.91
TRAF3IP3-213ENST00000478359 NXT2Q9NPJ8 142 aaKnown RBP9.39□□□□□ -0.91
TRAF3IP3-213ENST00000478359 SIGLEC8Q9NYZ4 499 aa9.39□□□□□ -0.91
TRAF3IP3-213ENST00000478359 PAM16Q9Y3D7 125 aa9.39□□□□□ -0.91
TRAF3IP3-213ENST00000478359 HELZ2Q9BYK8 2649 aaKnown RBP9.39□□□□□ -0.91
TRAF3IP3-213ENST00000478359 NAV2Q8IVL1 2488 aa9.38□□□□□ -0.91
TRAF3IP3-213ENST00000478359 TRAV2A0A0B4J234 112 aa9.38□□□□□ -0.91
TRAF3IP3-213ENST00000478359 MUC21A0A0G2JKD1 596 aa9.38□□□□□ -0.91
TRAF3IP3-213ENST00000478359 MUC21A0A140T8X8 626 aa9.38□□□□□ -0.91
TRAF3IP3-213ENST00000478359 SYS1-DBNDD2H3BUS1 97 aa9.38□□□□□ -0.91
TRAF3IP3-213ENST00000478359 DUSP14O95147 198 aaKnown RBP9.38□□□□□ -0.91
TRAF3IP3-213ENST00000478359 S100A4P26447 101 aaKnown RBP9.38□□□□□ -0.91
TRAF3IP3-213ENST00000478359 PRR31Q5SQ13 230 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms