RNA–Protein interactions for RNA: ENST00000477447.6

TARDBP-208, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 409 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-208ENST00000477447 MAPKBP1O60336 1514 aa0.89□□□□□ -2.27
TARDBP-208ENST00000477447 DISP1Q96F81 1524 aa0.89□□□□□ -2.27
TARDBP-208ENST00000477447 FLG2Q5D862 2391 aaPredicted RBP0.89□□□□□ -2.27
TARDBP-208ENST00000477447 CASKIN1Q8WXD9 1431 aa0.89□□□□□ -2.27
TARDBP-208ENST00000477447 CHD5Q8TDI0 1954 aa0.88□□□□□ -2.27
TARDBP-208ENST00000477447 ADGBQ8N7X0 1667 aa0.88□□□□□ -2.27
TARDBP-208ENST00000477447 RTTNQ86VV8 2226 aa0.88□□□□□ -2.27
TARDBP-208ENST00000477447 KDM5CP41229 1560 aa0.88□□□□□ -2.27
TARDBP-208ENST00000477447 CFTRP13569 1480 aa0.88□□□□□ -2.27
TARDBP-208ENST00000477447 CCDC141Q6ZP82 1450 aa0.88□□□□□ -2.27
TARDBP-208ENST00000477447 IFT140Q96RY7 1462 aa0.88□□□□□ -2.27
TARDBP-208ENST00000477447 TRAV7A0A075B6U4 112 aa0.88□□□□□ -2.27
TARDBP-208ENST00000477447 TRGV10A0A0A0MS01 117 aa0.88□□□□□ -2.27
TARDBP-208ENST00000477447 A0A0D9SG52 128 aa0.88□□□□□ -2.27
TARDBP-208ENST00000477447 RER1O15258 196 aa0.88□□□□□ -2.27
TARDBP-208ENST00000477447 RBP4P02753 201 aa0.88□□□□□ -2.27
TARDBP-208ENST00000477447 ETV6P41212 452 aa0.88□□□□□ -2.27
TARDBP-208ENST00000477447 RPL28P46779 137 aaKnown RBP0.88□□□□□ -2.27
TARDBP-208ENST00000477447 DYNLT1P63172 113 aa0.88□□□□□ -2.27
TARDBP-208ENST00000477447 Q0VG73 95 aa0.88□□□□□ -2.27
TARDBP-208ENST00000477447 Q56UQ5 140 aa0.88□□□□□ -2.27
TARDBP-208ENST00000477447 C6orf52Q5T4I8 152 aa0.88□□□□□ -2.27
TARDBP-208ENST00000477447 LINC01545Q5VT33 79 aa0.88□□□□□ -2.27
TARDBP-208ENST00000477447 SOSTDC1Q6X4U4 206 aa0.88□□□□□ -2.27
TARDBP-208ENST00000477447 BPIFA4PQ86YQ2 179 aa0.88□□□□□ -2.27
TARDBP-208ENST00000477447 DYNAPQ8N1N2 210 aa0.88□□□□□ -2.27
TARDBP-208ENST00000477447 KCNRGQ8N5I3 272 aa0.88□□□□□ -2.27
TARDBP-208ENST00000477447 SIGLECL1Q8N7X8 197 aa0.88□□□□□ -2.27
TARDBP-208ENST00000477447 OR5D16Q8NGK9 328 aa0.88□□□□□ -2.27
TARDBP-208ENST00000477447 OR5AK2Q8NH90 309 aa0.88□□□□□ -2.27
TARDBP-208ENST00000477447 LINC00052Q96N35 136 aa0.88□□□□□ -2.27
TARDBP-208ENST00000477447 MCEEQ96PE7 176 aa0.88□□□□□ -2.27
TARDBP-208ENST00000477447 SEC11CQ9BY50 192 aa0.88□□□□□ -2.27
TARDBP-208ENST00000477447 NPCDR1Q9BY65 106 aa0.88□□□□□ -2.27
TARDBP-208ENST00000477447 REG4Q9BYZ8 158 aa0.88□□□□□ -2.27
TARDBP-208ENST00000477447 DPY30Q9C005 99 aa0.88□□□□□ -2.27
TARDBP-208ENST00000477447 Q9H521 79 aa0.88□□□□□ -2.27
TARDBP-208ENST00000477447 NAA60Q9H7X0 242 aa0.88□□□□□ -2.27
TARDBP-208ENST00000477447 NPVFQ9HCQ7 196 aa0.88□□□□□ -2.27
TARDBP-208ENST00000477447 OSTCQ9NRP0 149 aa0.88□□□□□ -2.27
TARDBP-208ENST00000477447 SLC39A9Q9NUM3 307 aa0.88□□□□□ -2.27
TARDBP-208ENST00000477447 FKBP11Q9NYL4 201 aa0.88□□□□□ -2.27
TARDBP-208ENST00000477447 EPDR1Q9UM22 224 aa0.88□□□□□ -2.27
TARDBP-208ENST00000477447 SERP1Q9Y6X1 66 aa0.88□□□□□ -2.27
TARDBP-208ENST00000477447 DLC1Q96QB1 1528 aa0.88□□□□□ -2.27
TARDBP-208ENST00000477447 SPEF2Q9C093 1822 aa0.87□□□□□ -2.27
TARDBP-208ENST00000477447 CCDC88BA6NC98 1476 aa0.87□□□□□ -2.27
TARDBP-208ENST00000477447 MAGI2Q86UL8 1455 aa0.87□□□□□ -2.27
TARDBP-208ENST00000477447 IGKV2-40A0A087WW87 121 aaPredicted RBP0.87□□□□□ -2.27
TARDBP-208ENST00000477447 TRAV16A0A0A6YYK6 109 aaPredicted RBP0.87□□□□□ -2.27
TARDBP-208ENST00000477447 IGKV3D-7A0A0C4DH55 119 aa0.87□□□□□ -2.27
TARDBP-208ENST00000477447 IGKV3OR2-268A0A0C4DH90 116 aa0.87□□□□□ -2.27
TARDBP-208ENST00000477447 C3orf85A0A1B0GTC6 90 aa0.87□□□□□ -2.27
TARDBP-208ENST00000477447 MCRIP1C9JLW8 97 aa0.87□□□□□ -2.27
TARDBP-208ENST00000477447 APOC4-APOC2K7ER74 178 aa0.87□□□□□ -2.27
TARDBP-208ENST00000477447 IGKV2D-40P01614 121 aaPredicted RBP0.87□□□□□ -2.27
TARDBP-208ENST00000477447 IGLV1-51P01701 117 aa0.87□□□□□ -2.27
TARDBP-208ENST00000477447 APOC2P02655 101 aa0.87□□□□□ -2.27
TARDBP-208ENST00000477447 PMP2P02689 132 aa0.87□□□□□ -2.27
TARDBP-208ENST00000477447 MT-ND6P03923 174 aa0.87□□□□□ -2.27
TARDBP-208ENST00000477447 CLPSP04118 112 aa0.87□□□□□ -2.27
TARDBP-208ENST00000477447 SHBGP04278 402 aa0.87□□□□□ -2.27
TARDBP-208ENST00000477447 GYPBP06028 91 aa0.87□□□□□ -2.27
TARDBP-208ENST00000477447 TRAPPC2P0DI81 140 aa0.87□□□□□ -2.27
TARDBP-208ENST00000477447 TRAPPC2BP0DI82 140 aa0.87□□□□□ -2.27
TARDBP-208ENST00000477447 SLC25A4P12235 298 aa0.87□□□□□ -2.27
TARDBP-208ENST00000477447 IL7P13232 177 aa0.87□□□□□ -2.27
TARDBP-208ENST00000477447 BLCAPP62952 87 aa0.87□□□□□ -2.27
TARDBP-208ENST00000477447 SUPT4H1P63272 117 aaKnown RBP0.87□□□□□ -2.27
TARDBP-208ENST00000477447 CDK5R1Q15078 307 aa0.87□□□□□ -2.27
TARDBP-208ENST00000477447 TDRG1Q3Y452 100 aa0.87□□□□□ -2.27
TARDBP-208ENST00000477447 ASB16-AS1Q495Z4 193 aa0.87□□□□□ -2.27
TARDBP-208ENST00000477447 Q5BKY6 102 aa0.87□□□□□ -2.27
TARDBP-208ENST00000477447 C9orf153Q5TBE3 101 aa0.87□□□□□ -2.27
TARDBP-208ENST00000477447 MIC13Q5XKP0 118 aa0.87□□□□□ -2.27
TARDBP-208ENST00000477447 EIF5AL1Q6IS14 154 aaKnown RBP0.87□□□□□ -2.27
TARDBP-208ENST00000477447 MRPL54Q6P161 138 aaKnown RBP0.87□□□□□ -2.27
TARDBP-208ENST00000477447 ATP11AUNQ6ZP68 121 aa0.87□□□□□ -2.27
TARDBP-208ENST00000477447 Q8IYB0 196 aa0.87□□□□□ -2.27
TARDBP-208ENST00000477447 OR5AS1Q8N127 324 aa0.87□□□□□ -2.27
TARDBP-208ENST00000477447 FAM216BQ8N7L0 139 aa0.87□□□□□ -2.27
TARDBP-208ENST00000477447 SCGB3A1Q96QR1 104 aa0.87□□□□□ -2.27
TARDBP-208ENST00000477447 DSCR8Q96T75 97 aa0.87□□□□□ -2.27
TARDBP-208ENST00000477447 VAMP8Q9BV40 100 aa0.87□□□□□ -2.27
TARDBP-208ENST00000477447 SAR1AQ9NR31 198 aa0.87□□□□□ -2.27
TARDBP-208ENST00000477447 NOP16Q9Y3C1 178 aaKnown RBP0.87□□□□□ -2.27
TARDBP-208ENST00000477447 ABCC5O15440 1437 aa0.87□□□□□ -2.27
TARDBP-208ENST00000477447 CLIP1P30622 1438 aa0.87□□□□□ -2.27
TARDBP-208ENST00000477447 FBN3Q75N90 2809 aa0.87□□□□□ -2.27
TARDBP-208ENST00000477447 NRKQ7Z2Y5 1582 aa0.87□□□□□ -2.27
TARDBP-208ENST00000477447 POLA1P09884 1462 aaPredicted RBP0.86□□□□□ -2.27
TARDBP-208ENST00000477447 ERVK-7P63135 1459 aa0.86□□□□□ -2.27
TARDBP-208ENST00000477447 SCAF11Q99590 1463 aaKnown RBP0.86□□□□□ -2.27
TARDBP-208ENST00000477447 KDM5AP29375 1690 aaKnown RBP0.86□□□□□ -2.27
TARDBP-208ENST00000477447 RBAKDNA6NC62 111 aa0.86□□□□□ -2.27
TARDBP-208ENST00000477447 B4DSR2 109 aa0.86□□□□□ -2.27
TARDBP-208ENST00000477447 H3BQ15 152 aa0.86□□□□□ -2.27
TARDBP-208ENST00000477447 K7EP34 96 aa0.86□□□□□ -2.27
TARDBP-208ENST00000477447 EDF1O60869 148 aaKnown RBP0.86□□□□□ -2.27
TARDBP-208ENST00000477447 NDUFB6O95139 128 aa0.86□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms