RNA–Protein interactions for RNA: ENST00000477424.2

C4A-253, Transcript of complement C4A (Rodgers blood group), humanhuman

TSL 2

Gene C4A, Length 303 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4A-253ENST00000477424 CMTM2Q8TAZ6 248 aa12.53□□□□□ -0.4
C4A-253ENST00000477424 ACTR3CQ9C0K3 210 aaPredicted RBP12.53□□□□□ -0.4
C4A-253ENST00000477424 MUC4Q99102 2169 aa12.53□□□□□ -0.4
C4A-253ENST00000477424 IGHV1OR15-1A0A075B7D0 117 aa12.52□□□□□ -0.41
C4A-253ENST00000477424 DAZ2Q13117 558 aaKnown RBP12.52□□□□□ -0.41
C4A-253ENST00000477424 FAM74A1Q5RGS3 127 aa12.52□□□□□ -0.41
C4A-253ENST00000477424 ZNF680Q8NEM1 530 aa12.52□□□□□ -0.41
C4A-253ENST00000477424 TVP23CQ96ET8 276 aa12.52□□□□□ -0.41
C4A-253ENST00000477424 KLF12Q9Y4X4 402 aa12.52□□□□□ -0.41
C4A-253ENST00000477424 FRAS1Q86XX4 4008 aa12.52□□□□□ -0.41
C4A-253ENST00000477424 GGTLC3B5MD39 225 aa12.51□□□□□ -0.41
C4A-253ENST00000477424 RGS13O14921 159 aa12.51□□□□□ -0.41
C4A-253ENST00000477424 TCL1AP56279 114 aa12.51□□□□□ -0.41
C4A-253ENST00000477424 TMED6Q8WW62 240 aa12.51□□□□□ -0.41
C4A-253ENST00000477424 ST6GAL2Q96JF0 529 aa12.51□□□□□ -0.41
C4A-253ENST00000477424 LENEPQ9Y5L5 61 aa12.51□□□□□ -0.41
C4A-253ENST00000477424 TAAR5O14804 337 aa12.5□□□□□ -0.41
C4A-253ENST00000477424 CXorf1O96002 111 aa12.5□□□□□ -0.41
C4A-253ENST00000477424 HOXA5P20719 270 aa12.5□□□□□ -0.41
C4A-253ENST00000477424 MUC21Q5SSG8 566 aa12.5□□□□□ -0.41
C4A-253ENST00000477424 Q6AWC8 147 aa12.5□□□□□ -0.41
C4A-253ENST00000477424 ARL6IP6Q8N6S5 226 aa12.5□□□□□ -0.41
C4A-253ENST00000477424 SGK494Q96LW2 274 aa12.5□□□□□ -0.41
C4A-253ENST00000477424 TMPRSS5Q9H3S3 457 aa12.5□□□□□ -0.41
C4A-253ENST00000477424 CTXND1A0A1B0GTU2 59 aa12.49□□□□□ -0.41
C4A-253ENST00000477424 F6UZH7 168 aa12.49□□□□□ -0.41
C4A-253ENST00000477424 ZNF345Q14585 488 aa12.49□□□□□ -0.41
C4A-253ENST00000477424 IBA57Q5T440 356 aaKnown RBP12.49□□□□□ -0.41
C4A-253ENST00000477424 KCNRGQ8N5I3 272 aa12.49□□□□□ -0.41
C4A-253ENST00000477424 C15orf53Q8NAA6 179 aa12.49□□□□□ -0.41
C4A-253ENST00000477424 C5orf17Q8NAS9 161 aa12.49□□□□□ -0.41
C4A-253ENST00000477424 TMEM167BQ9NRX6 74 aa12.49□□□□□ -0.41
C4A-253ENST00000477424 DNAH10Q8IVF4 4471 aa12.49□□□□□ -0.41
C4A-253ENST00000477424 TCRAP04437 139 aa12.48□□□□□ -0.41
C4A-253ENST00000477424 FGF8P55075 233 aaPredicted RBP12.48□□□□□ -0.41
C4A-253ENST00000477424 UBE2DNLQ8IWF7 75 aa12.48□□□□□ -0.41
C4A-253ENST00000477424 IQCF2Q8IXL9 164 aa12.48□□□□□ -0.41
C4A-253ENST00000477424 ARPC5LQ9BPX5 153 aa12.48□□□□□ -0.41
C4A-253ENST00000477424 BIRC6Q9NR09 4857 aa12.47□□□□□ -0.41
C4A-253ENST00000477424 TRGV1A0A0A0MS02 117 aa12.47□□□□□ -0.41
C4A-253ENST00000477424 SPINK4O60575 86 aa12.47□□□□□ -0.41
C4A-253ENST00000477424 SUMO1P63165 101 aaKnown RBP12.47□□□□□ -0.41
C4A-253ENST00000477424 AKR1C8PQ5T2L2 129 aa12.47□□□□□ -0.41
C4A-253ENST00000477424 MRPL16Q9NX20 251 aaKnown RBP12.47□□□□□ -0.41
C4A-253ENST00000477424 TRAV26-1A0A087WT03 109 aa12.46□□□□□ -0.41
C4A-253ENST00000477424 HMSDA8MTL9 139 aa12.46□□□□□ -0.41
C4A-253ENST00000477424 NUDT3O95989 172 aa12.46□□□□□ -0.41
C4A-253ENST00000477424 IGLV2-11P01706 119 aa12.46□□□□□ -0.41
C4A-253ENST00000477424 OR5I1Q13606 314 aa12.46□□□□□ -0.41
C4A-253ENST00000477424 C8orf49Q96NF6 230 aa12.46□□□□□ -0.41
C4A-253ENST00000477424 MDFICQ9P1T7 246 aa12.46□□□□□ -0.41
C4A-253ENST00000477424 FHITP49789 147 aa12.45□□□□□ -0.42
C4A-253ENST00000477424 UBE2G2P60604 165 aa12.45□□□□□ -0.42
C4A-253ENST00000477424 ZNF415Q09FC8 603 aa12.45□□□□□ -0.42
C4A-253ENST00000477424 C18orf15Q96N68 181 aa12.45□□□□□ -0.42
C4A-253ENST00000477424 TREM1Q9NP99 234 aa12.45□□□□□ -0.42
C4A-253ENST00000477424 NAGKQ9UJ70 344 aa12.45□□□□□ -0.42
C4A-253ENST00000477424 EPDR1Q9UM22 224 aa12.45□□□□□ -0.42
C4A-253ENST00000477424 IGLV2-18A0A075B6J9 118 aa12.44□□□□□ -0.42
C4A-253ENST00000477424 TRGV2A0A075B6R0 118 aa12.44□□□□□ -0.42
C4A-253ENST00000477424 A0A0J9YY99 117 aa12.44□□□□□ -0.42
C4A-253ENST00000477424 SERTM2A0A1B0GWG4 89 aa12.44□□□□□ -0.42
C4A-253ENST00000477424 A0A1W2PRE2 83 aa12.44□□□□□ -0.42
C4A-253ENST00000477424 MAP1LC3B2A6NCE7 125 aa12.44□□□□□ -0.42
C4A-253ENST00000477424 M0R2N4 97 aa12.44□□□□□ -0.42
C4A-253ENST00000477424 BCL2L11O43521 198 aa12.44□□□□□ -0.42
C4A-253ENST00000477424 ZNF80P51504 273 aaPredicted RBP12.44□□□□□ -0.42
C4A-253ENST00000477424 TMEM183BQ1AE95 376 aa12.44□□□□□ -0.42
C4A-253ENST00000477424 RNF212Q495C1 297 aa12.44□□□□□ -0.42
C4A-253ENST00000477424 TMEM183AQ8IXX5 376 aa12.44□□□□□ -0.42
C4A-253ENST00000477424 MAP1LC3BQ9GZQ8 125 aa12.44□□□□□ -0.42
C4A-253ENST00000477424 PSG8Q9UQ74 426 aa12.44□□□□□ -0.42
C4A-253ENST00000477424 TDRG1Q3Y452 100 aa12.43□□□□□ -0.42
C4A-253ENST00000477424 FAM159AQ6UWV7 190 aa12.43□□□□□ -0.42
C4A-253ENST00000477424 CYB561D1Q8N8Q1 229 aa12.43□□□□□ -0.42
C4A-253ENST00000477424 ATG101Q9BSB4 218 aa12.43□□□□□ -0.42
C4A-253ENST00000477424 A0A0D9SG52 128 aa12.42□□□□□ -0.42
C4A-253ENST00000477424 FAM74A7A6NL05 159 aa12.42□□□□□ -0.42
C4A-253ENST00000477424 IGHV3-53P01767 116 aa12.42□□□□□ -0.42
C4A-253ENST00000477424 FLI1Q01543 452 aaPredicted RBP12.42□□□□□ -0.42
C4A-253ENST00000477424 TMEM75Q8N9X5 138 aa12.42□□□□□ -0.42
C4A-253ENST00000477424 VSIG2Q96IQ7 327 aa12.42□□□□□ -0.42
C4A-253ENST00000477424 LINC00479Q96M42 142 aa12.42□□□□□ -0.42
C4A-253ENST00000477424 ZNF471Q9BX82 626 aaPredicted RBP12.42□□□□□ -0.42
C4A-253ENST00000477424 C11orf21Q9P2W6 132 aa12.42□□□□□ -0.42
C4A-253ENST00000477424 TRGV11A0A075B6L2 103 aa12.41□□□□□ -0.42
C4A-253ENST00000477424 TRAV34A0A0B4J273 112 aa12.41□□□□□ -0.42
C4A-253ENST00000477424 TRAV21A0A0B4J279 112 aa12.41□□□□□ -0.42
C4A-253ENST00000477424 GNRH2O43555 120 aa12.41□□□□□ -0.42
C4A-253ENST00000477424 TYMSP04818 313 aa12.41□□□□□ -0.42
C4A-253ENST00000477424 LGALS9BQ3B8N2 356 aa12.41□□□□□ -0.42
C4A-253ENST00000477424 Q6ZR54 194 aa12.41□□□□□ -0.42
C4A-253ENST00000477424 PRNTQ86SH4 94 aa12.41□□□□□ -0.42
C4A-253ENST00000477424 NDFIP1Q9BT67 221 aa12.41□□□□□ -0.42
C4A-253ENST00000477424 LINC00588Q9Y4M8 146 aa12.41□□□□□ -0.42
C4A-253ENST00000477424 IGHV3-16A0A0C4DH30 117 aa12.4□□□□□ -0.42
C4A-253ENST00000477424 KANTRA0A1W2PQU2 76 aa12.4□□□□□ -0.42
C4A-253ENST00000477424 K7EQM0 130 aa12.4□□□□□ -0.42
C4A-253ENST00000477424 SEC11BP0C7V7 166 aa12.4□□□□□ -0.42
C4A-253ENST00000477424 PEX7O00628 323 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms