RNA–Protein interactions for RNA: ENST00000477152.5

BRCA1-214, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,980 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-214ENST00000477152 CSN1S1P47710 185 aa5.01□□□□□ -1.61
BRCA1-214ENST00000477152 BAXQ07812 192 aa5.01□□□□□ -1.61
BRCA1-214ENST00000477152 OPCMLQ14982 345 aa5.01□□□□□ -1.61
BRCA1-214ENST00000477152 MRPL23Q16540 153 aaKnown RBP5.01□□□□□ -1.61
BRCA1-214ENST00000477152 IBA57Q5T440 356 aaKnown RBP5.01□□□□□ -1.61
BRCA1-214ENST00000477152 ZNF431Q8TF32 576 aaPredicted RBP5.01□□□□□ -1.61
BRCA1-214ENST00000477152 MGST2Q99735 147 aa5.01□□□□□ -1.61
BRCA1-214ENST00000477152 SRRQ9GZT4 340 aa5.01□□□□□ -1.61
BRCA1-214ENST00000477152 GPN1Q9HCN4 374 aaPredicted RBP5.01□□□□□ -1.61
BRCA1-214ENST00000477152 TMEM14CQ9P0S9 112 aa5.01□□□□□ -1.61
BRCA1-214ENST00000477152 PRO0255Q9UI72 69 aa5.01□□□□□ -1.61
BRCA1-214ENST00000477152 FUT9Q9Y231 359 aa5.01□□□□□ -1.61
BRCA1-214ENST00000477152 LSM5Q9Y4Y9 91 aaKnown RBP5.01□□□□□ -1.61
BRCA1-214ENST00000477152 EPM2AB3EWF7 344 aa5□□□□□ -1.61
BRCA1-214ENST00000477152 CT45A10P0DMU9 189 aa5□□□□□ -1.61
BRCA1-214ENST00000477152 CAMPP49913 170 aa5□□□□□ -1.61
BRCA1-214ENST00000477152 SULT1A1P50225 295 aa5□□□□□ -1.61
BRCA1-214ENST00000477152 ZNF415Q09FC8 603 aa5□□□□□ -1.61
BRCA1-214ENST00000477152 NEXN-AS1Q8NBZ9 246 aa5□□□□□ -1.61
BRCA1-214ENST00000477152 TMEM37Q8WXS4 190 aa5□□□□□ -1.61
BRCA1-214ENST00000477152 SAT2Q96F10 170 aaPredicted RBP5□□□□□ -1.61
BRCA1-214ENST00000477152 SLC39A9Q9NUM3 307 aa5□□□□□ -1.61
BRCA1-214ENST00000477152 TRBV19A0A075B6N1 114 aa5□□□□□ -1.61
BRCA1-214ENST00000477152 A0A096LPF7 62 aa5□□□□□ -1.61
BRCA1-214ENST00000477152 TRBV7-9A0A0J9YWB2 115 aa5□□□□□ -1.61
BRCA1-214ENST00000477152 VCYO14598 125 aa5□□□□□ -1.61
BRCA1-214ENST00000477152 ZNF324O75467 553 aaPredicted RBP5□□□□□ -1.61
BRCA1-214ENST00000477152 CCNKO75909 580 aa5□□□□□ -1.61
BRCA1-214ENST00000477152 ORM1P02763 201 aa5□□□□□ -1.61
BRCA1-214ENST00000477152 EVI2AP22794 236 aa5□□□□□ -1.61
BRCA1-214ENST00000477152 RNASE4P34096 147 aaKnown RBP5□□□□□ -1.61
BRCA1-214ENST00000477152 TCL1AP56279 114 aa5□□□□□ -1.61
BRCA1-214ENST00000477152 Q6ZTI0 123 aa5□□□□□ -1.61
BRCA1-214ENST00000477152 SH2D6Q7Z4S9 175 aa5□□□□□ -1.61
BRCA1-214ENST00000477152 NRACQ8N912 160 aa5□□□□□ -1.61
BRCA1-214ENST00000477152 FRZBQ92765 325 aa5□□□□□ -1.61
BRCA1-214ENST00000477152 ST6GAL2Q96JF0 529 aa5□□□□□ -1.61
BRCA1-214ENST00000477152 C2orf50Q96LR7 162 aa5□□□□□ -1.61
BRCA1-214ENST00000477152 FLVCR2Q9UPI3 526 aa5□□□□□ -1.61
BRCA1-214ENST00000477152 WDR83OSQ9Y284 106 aa5□□□□□ -1.61
BRCA1-214ENST00000477152 PCLOQ9Y6V0 5065 aa4.99□□□□□ -1.61
BRCA1-214ENST00000477152 TRGV4A0A0C4DH28 118 aa4.99□□□□□ -1.61
BRCA1-214ENST00000477152 LINC00854A0A1B0GVQ3 168 aa4.99□□□□□ -1.61
BRCA1-214ENST00000477152 C17orf112F2Z3M2 114 aa4.99□□□□□ -1.61
BRCA1-214ENST00000477152 SLC17A3O00476 420 aa4.99□□□□□ -1.61
BRCA1-214ENST00000477152 SPINK4O60575 86 aa4.99□□□□□ -1.61
BRCA1-214ENST00000477152 FGF7P21781 194 aa4.99□□□□□ -1.61
BRCA1-214ENST00000477152 LINC00315P59091 139 aa4.99□□□□□ -1.61
BRCA1-214ENST00000477152 MIC13Q5XKP0 118 aa4.99□□□□□ -1.61
BRCA1-214ENST00000477152 C9orf47Q6ZRZ4 202 aa4.99□□□□□ -1.61
BRCA1-214ENST00000477152 NEGR1Q7Z3B1 354 aa4.99□□□□□ -1.61
BRCA1-214ENST00000477152 C10orf126Q8N4M7 172 aa4.99□□□□□ -1.61
BRCA1-214ENST00000477152 URB1-AS1Q96HZ7 61 aa4.99□□□□□ -1.61
BRCA1-214ENST00000477152 TXNDC17Q9BRA2 123 aa4.99□□□□□ -1.61
BRCA1-214ENST00000477152 SLC25A31Q9H0C2 315 aa4.99□□□□□ -1.61
BRCA1-214ENST00000477152 SH3BGRL3Q9H299 93 aa4.99□□□□□ -1.61
BRCA1-214ENST00000477152 GSN-AS1Q9NRJ2 163 aa4.99□□□□□ -1.61
BRCA1-214ENST00000477152 HHLA3Q9XRX5 114 aa4.99□□□□□ -1.61
BRCA1-214ENST00000477152 LY96Q9Y6Y9 160 aa4.99□□□□□ -1.61
BRCA1-214ENST00000477152 IGHV1OR15-1A0A075B7D0 117 aa4.98□□□□□ -1.61
BRCA1-214ENST00000477152 UBE2L5PA0A1B0GUS4 154 aa4.98□□□□□ -1.61
BRCA1-214ENST00000477152 KLLNB2CW77 178 aa4.98□□□□□ -1.61
BRCA1-214ENST00000477152 PRAC2D3DTV9 90 aa4.98□□□□□ -1.61
BRCA1-214ENST00000477152 H3BQ15 152 aa4.98□□□□□ -1.61
BRCA1-214ENST00000477152 H3BTX0 84 aa4.98□□□□□ -1.61
BRCA1-214ENST00000477152 CST7O76096 145 aa4.98□□□□□ -1.61
BRCA1-214ENST00000477152 NXPH4O95158 308 aa4.98□□□□□ -1.61
BRCA1-214ENST00000477152 SNRPCP09234 159 aaKnown RBP4.98□□□□□ -1.61
BRCA1-214ENST00000477152 CRISP2P16562 243 aa4.98□□□□□ -1.61
BRCA1-214ENST00000477152 SRIP30626 198 aa4.98□□□□□ -1.61
BRCA1-214ENST00000477152 S100A10P60903 97 aa4.98□□□□□ -1.61
BRCA1-214ENST00000477152 VWC2Q2TAL6 325 aa4.98□□□□□ -1.61
BRCA1-214ENST00000477152 MORN5Q5VZ52 161 aa4.98□□□□□ -1.61
BRCA1-214ENST00000477152 BLNKQ8WV28 456 aa4.98□□□□□ -1.61
BRCA1-214ENST00000477152 VGLL1Q99990 258 aa4.98□□□□□ -1.61
BRCA1-214ENST00000477152 SPXQ9BT56 116 aa4.98□□□□□ -1.61
BRCA1-214ENST00000477152 MRPL32Q9BYC8 188 aaKnown RBP4.98□□□□□ -1.61
BRCA1-214ENST00000477152 PARD6GQ9BYG4 376 aaPredicted RBP4.98□□□□□ -1.61
BRCA1-214ENST00000477152 LYRM2Q9NU23 88 aaPredicted RBP4.98□□□□□ -1.61
BRCA1-214ENST00000477152 ARL16Q0P5N6 197 aa4.98□□□□□ -1.61
BRCA1-214ENST00000477152 FAM74A1Q5RGS3 127 aa4.98□□□□□ -1.61
BRCA1-214ENST00000477152 LYPD1Q8N2G4 141 aa4.98□□□□□ -1.61
BRCA1-214ENST00000477152 ATP5SQ99766 215 aa4.98□□□□□ -1.61
BRCA1-214ENST00000477152 DNAH11Q96DT5 4516 aa4.97□□□□□ -1.61
BRCA1-214ENST00000477152 TRAV5A0A0B4J249 113 aa4.97□□□□□ -1.61
BRCA1-214ENST00000477152 IGLV5-39A0A0G2JS06 123 aa4.97□□□□□ -1.61
BRCA1-214ENST00000477152 FAM24AA6NFZ4 105 aa4.97□□□□□ -1.61
BRCA1-214ENST00000477152 C9JCJ5 164 aa4.97□□□□□ -1.61
BRCA1-214ENST00000477152 LYRM1O43325 122 aa4.97□□□□□ -1.61
BRCA1-214ENST00000477152 NBEAP1P0C6P0 100 aa4.97□□□□□ -1.61
BRCA1-214ENST00000477152 IL7P13232 177 aa4.97□□□□□ -1.61
BRCA1-214ENST00000477152 ZNF138P52744 262 aa4.97□□□□□ -1.61
BRCA1-214ENST00000477152 FAM159AQ6UWV7 190 aa4.97□□□□□ -1.61
BRCA1-214ENST00000477152 PQLC2Q6ZP29 291 aa4.97□□□□□ -1.61
BRCA1-214ENST00000477152 IQCF2Q8IXL9 164 aa4.97□□□□□ -1.61
BRCA1-214ENST00000477152 TMEM252Q8N6L7 170 aa4.97□□□□□ -1.61
BRCA1-214ENST00000477152 C11orf72Q8NBR9 251 aa4.97□□□□□ -1.61
BRCA1-214ENST00000477152 VSIG2Q96IQ7 327 aa4.97□□□□□ -1.61
BRCA1-214ENST00000477152 KRTAP4-5Q9BYR2 181 aa4.97□□□□□ -1.61
BRCA1-214ENST00000477152 AGPAT4-IT1Q9H0P7 198 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 217.3 ms