RNA–Protein interactions for RNA: ENST00000477085.1

COL4A6-206, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,784 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-206ENST00000477085 LINC00482Q8N8I6 264 aa10.76□□□□□ -0.69
COL4A6-206ENST00000477085 OR2D3Q8NGH3 330 aa10.76□□□□□ -0.69
COL4A6-206ENST00000477085 NEU1Q99519 415 aa10.76□□□□□ -0.69
COL4A6-206ENST00000477085 TRAV2A0A0B4J234 112 aa10.75□□□□□ -0.69
COL4A6-206ENST00000477085 A0A0J9YX75 114 aa10.75□□□□□ -0.69
COL4A6-206ENST00000477085 PHOX2AO14813 284 aa10.75□□□□□ -0.69
COL4A6-206ENST00000477085 SPINK4O60575 86 aa10.75□□□□□ -0.69
COL4A6-206ENST00000477085 TYMSP04818 313 aa10.75□□□□□ -0.69
COL4A6-206ENST00000477085 ZNF124Q15973 351 aa10.75□□□□□ -0.69
COL4A6-206ENST00000477085 CT83Q5H943 113 aa10.75□□□□□ -0.69
COL4A6-206ENST00000477085 NUP35Q8NFH5 326 aa10.75□□□□□ -0.69
COL4A6-206ENST00000477085 NDFIP1Q9BT67 221 aa10.75□□□□□ -0.69
COL4A6-206ENST00000477085 C11orf21Q9P2W6 132 aa10.75□□□□□ -0.69
COL4A6-206ENST00000477085 ATRQ13535 2644 aa10.75□□□□□ -0.69
COL4A6-206ENST00000477085 OR4B1Q8NGF8 309 aa10.75□□□□□ -0.69
COL4A6-206ENST00000477085 LENEPQ9Y5L5 61 aa10.75□□□□□ -0.69
COL4A6-206ENST00000477085 HIGD1CA8MV81 97 aa10.74□□□□□ -0.69
COL4A6-206ENST00000477085 SAP30O75446 220 aa10.74□□□□□ -0.69
COL4A6-206ENST00000477085 DEFB131AP59861 70 aa10.74□□□□□ -0.69
COL4A6-206ENST00000477085 BTF3L4Q96K17 158 aa10.74□□□□□ -0.69
COL4A6-206ENST00000477085 SRD5A3Q9H8P0 318 aa10.74□□□□□ -0.69
COL4A6-206ENST00000477085 TRAV25A0A0B4J276 109 aa10.73□□□□□ -0.69
COL4A6-206ENST00000477085 C5orf52A6NGY3 159 aa10.73□□□□□ -0.69
COL4A6-206ENST00000477085 KNCNA6PVL3 124 aa10.73□□□□□ -0.69
COL4A6-206ENST00000477085 FABP5P3A8MUU1 101 aa10.73□□□□□ -0.69
COL4A6-206ENST00000477085 A8MWL6 223 aa10.73□□□□□ -0.69
COL4A6-206ENST00000477085 J3KRW8 73 aa10.73□□□□□ -0.69
COL4A6-206ENST00000477085 IGLV1-51P01701 117 aa10.73□□□□□ -0.69
COL4A6-206ENST00000477085 TRGC2P03986 189 aa10.73□□□□□ -0.69
COL4A6-206ENST00000477085 SPAG8Q99932 426 aaPredicted RBP10.73□□□□□ -0.69
COL4A6-206ENST00000477085 TRAV9-1A0A075B6T8 112 aa10.72□□□□□ -0.69
COL4A6-206ENST00000477085 TMSB15BA0A087X1C1 80 aa10.72□□□□□ -0.69
COL4A6-206ENST00000477085 IGKV3D-20A0A0C4DH25 116 aa10.72□□□□□ -0.69
COL4A6-206ENST00000477085 IGKV3-20P01619 116 aa10.72□□□□□ -0.69
COL4A6-206ENST00000477085 CRISP2P16562 243 aa10.72□□□□□ -0.69
COL4A6-206ENST00000477085 APRG1Q8IVJ8 170 aa10.72□□□□□ -0.69
COL4A6-206ENST00000477085 MAP6D1Q9H9H5 199 aa10.72□□□□□ -0.69
COL4A6-206ENST00000477085 NAT8BQ9UHF3 227 aa10.72□□□□□ -0.69
COL4A6-206ENST00000477085 TMEM189A5PLL7 270 aa10.72□□□□□ -0.69
COL4A6-206ENST00000477085 PF4P02776 101 aa10.72□□□□□ -0.69
COL4A6-206ENST00000477085 FOXA3P55318 350 aaPredicted RBP10.72□□□□□ -0.69
COL4A6-206ENST00000477085 SNRPEP62304 92 aaKnown RBP10.72□□□□□ -0.69
COL4A6-206ENST00000477085 FOXI2Q6ZQN5 318 aa10.72□□□□□ -0.69
COL4A6-206ENST00000477085 PGLYRP4Q96LB8 373 aa10.72□□□□□ -0.69
COL4A6-206ENST00000477085 GFRA4Q9GZZ7 299 aa10.72□□□□□ -0.69
COL4A6-206ENST00000477085 TRRAPQ9Y4A5 3859 aa10.72□□□□□ -0.69
COL4A6-206ENST00000477085 SORL1Q92673 2214 aa10.71□□□□□ -0.69
COL4A6-206ENST00000477085 UBE2CO00762 179 aa10.71□□□□□ -0.69
COL4A6-206ENST00000477085 S100A6P06703 90 aa10.71□□□□□ -0.69
COL4A6-206ENST00000477085 ODF3L2Q3SX64 289 aa10.71□□□□□ -0.69
COL4A6-206ENST00000477085 MRPL54Q6P161 138 aaKnown RBP10.71□□□□□ -0.69
COL4A6-206ENST00000477085 EBLN2Q6P2I7 272 aa10.71□□□□□ -0.69
COL4A6-206ENST00000477085 AMTNQ6UX39 209 aa10.71□□□□□ -0.69
COL4A6-206ENST00000477085 TRBV7-9A0A0J9YWB2 115 aa10.7□□□□□ -0.7
COL4A6-206ENST00000477085 FAM231BA6NCW3 169 aa10.7□□□□□ -0.7
COL4A6-206ENST00000477085 OR4C46A6NHA9 309 aa10.7□□□□□ -0.7
COL4A6-206ENST00000477085 KLLNB2CW77 178 aa10.7□□□□□ -0.7
COL4A6-206ENST00000477085 ORM1P02763 201 aa10.7□□□□□ -0.7
COL4A6-206ENST00000477085 RBMY1BA6NDE4 496 aaKnown RBP10.7□□□□□ -0.7
COL4A6-206ENST00000477085 RBMY1EA6NEQ0 496 aaKnown RBP10.7□□□□□ -0.7
COL4A6-206ENST00000477085 H3BMM0 161 aa10.7□□□□□ -0.7
COL4A6-206ENST00000477085 GPX1P07203 203 aa10.7□□□□□ -0.7
COL4A6-206ENST00000477085 RBMY1DP0C7P1 496 aaKnown RBP10.7□□□□□ -0.7
COL4A6-206ENST00000477085 RNASE4P34096 147 aaKnown RBP10.7□□□□□ -0.7
COL4A6-206ENST00000477085 LINC01559Q495D7 138 aa10.7□□□□□ -0.7
COL4A6-206ENST00000477085 ACTL10Q5JWF8 245 aa10.7□□□□□ -0.7
COL4A6-206ENST00000477085 FRZBQ92765 325 aa10.7□□□□□ -0.7
COL4A6-206ENST00000477085 A0A1B0GXF2 115 aa10.69□□□□□ -0.7
COL4A6-206ENST00000477085 GRIFINA4D1Z8 144 aa10.69□□□□□ -0.7
COL4A6-206ENST00000477085 A8MTW9 85 aa10.68□□□□□ -0.7
COL4A6-206ENST00000477085 M0R2Z0 102 aa10.68□□□□□ -0.7
COL4A6-206ENST00000477085 HLA-DRB4P13762 266 aa10.68□□□□□ -0.7
COL4A6-206ENST00000477085 FABP9Q0Z7S8 132 aa10.68□□□□□ -0.7
COL4A6-206ENST00000477085 Q6AWC8 147 aa10.68□□□□□ -0.7
COL4A6-206ENST00000477085 TMEM136Q6ZRR5 245 aa10.68□□□□□ -0.7
COL4A6-206ENST00000477085 ODF3Q96PU9 254 aa10.68□□□□□ -0.7
COL4A6-206ENST00000477085 HLA-DRB4X5D2U9 266 aa10.68□□□□□ -0.7
COL4A6-206ENST00000477085 AGRNO00468 2067 aa10.68□□□□□ -0.7
COL4A6-206ENST00000477085 TRAV12-2A0A075B6T6 113 aa10.67□□□□□ -0.7
COL4A6-206ENST00000477085 DUSP14O95147 198 aaKnown RBP10.67□□□□□ -0.7
COL4A6-206ENST00000477085 AKR1D1P51857 326 aa10.67□□□□□ -0.7
COL4A6-206ENST00000477085 BEAN1Q3B7T3 259 aa10.67□□□□□ -0.7
COL4A6-206ENST00000477085 PRR31Q5SQ13 230 aa10.67□□□□□ -0.7
COL4A6-206ENST00000477085 HIST1H2BKO60814 126 aa10.67□□□□□ -0.7
COL4A6-206ENST00000477085 ZNF324O75467 553 aaPredicted RBP10.67□□□□□ -0.7
COL4A6-206ENST00000477085 HIST1H2BJP06899 126 aa10.67□□□□□ -0.7
COL4A6-206ENST00000477085 CD7P09564 240 aa10.67□□□□□ -0.7
COL4A6-206ENST00000477085 ARMS2P0C7Q2 107 aa10.67□□□□□ -0.7
COL4A6-206ENST00000477085 IGLC6P0CF74 106 aa10.67□□□□□ -0.7
COL4A6-206ENST00000477085 HIST1H2BOP23527 126 aa10.67□□□□□ -0.7
COL4A6-206ENST00000477085 HIST1H2BBP33778 126 aa10.67□□□□□ -0.7
COL4A6-206ENST00000477085 HIST1H2BDP58876 126 aa10.67□□□□□ -0.7
COL4A6-206ENST00000477085 HIST1H2BCP62807 126 aa10.67□□□□□ -0.7
COL4A6-206ENST00000477085 HIST2H2BEQ16778 126 aa10.67□□□□□ -0.7
COL4A6-206ENST00000477085 SPINK13Q1W4C9 94 aa10.67□□□□□ -0.7
COL4A6-206ENST00000477085 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.67□□□□□ -0.7
COL4A6-206ENST00000477085 GFI1BQ5VTD9 330 aa10.67□□□□□ -0.7
COL4A6-206ENST00000477085 LYZL1Q6UWQ5 148 aa10.67□□□□□ -0.7
COL4A6-206ENST00000477085 LINC00518Q8N0U6 118 aa10.67□□□□□ -0.7
COL4A6-206ENST00000477085 HIST1H2BHQ93079 126 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms