RNA–Protein interactions for RNA: ENST00000476642.5

HLA-DPA1-246, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

Gene HLA-DPA1, Length 519 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-246ENST00000476642 SAPCD1Q5SSQ6 148 aa9.56□□□□□ -0.88
HLA-DPA1-246ENST00000476642 GFI1BQ5VTD9 330 aa9.56□□□□□ -0.88
HLA-DPA1-246ENST00000476642 Q8NAQ8 132 aa9.56□□□□□ -0.88
HLA-DPA1-246ENST00000476642 PYGO2Q9BRQ0 406 aa9.56□□□□□ -0.88
HLA-DPA1-246ENST00000476642 IGHV4-28A0A0C4DH34 117 aa9.55□□□□□ -0.88
HLA-DPA1-246ENST00000476642 J3KRW8 73 aa9.55□□□□□ -0.88
HLA-DPA1-246ENST00000476642 S100A9P06702 114 aaKnown RBP9.55□□□□□ -0.88
HLA-DPA1-246ENST00000476642 FLI1Q01543 452 aaPredicted RBP9.55□□□□□ -0.88
HLA-DPA1-246ENST00000476642 ZFAND6Q6FIF0 208 aa9.55□□□□□ -0.88
HLA-DPA1-246ENST00000476642 ZNF493Q6ZR52 646 aa9.55□□□□□ -0.88
HLA-DPA1-246ENST00000476642 GNG13Q9P2W3 67 aa9.55□□□□□ -0.88
HLA-DPA1-246ENST00000476642 TRAV12-3A0A0B4J271 114 aa9.54□□□□□ -0.88
HLA-DPA1-246ENST00000476642 RNASE4P34096 147 aaKnown RBP9.54□□□□□ -0.88
HLA-DPA1-246ENST00000476642 UBE2G1P62253 170 aa9.54□□□□□ -0.88
HLA-DPA1-246ENST00000476642 EIF4E3Q8N5X7 224 aaKnown RBP9.54□□□□□ -0.88
HLA-DPA1-246ENST00000476642 ZFAND2AQ8N6M9 145 aa9.54□□□□□ -0.88
HLA-DPA1-246ENST00000476642 Q8TAT8 98 aa9.54□□□□□ -0.88
HLA-DPA1-246ENST00000476642 C16orf74Q96GX8 76 aa9.54□□□□□ -0.88
HLA-DPA1-246ENST00000476642 TREM1Q9NP99 234 aa9.54□□□□□ -0.88
HLA-DPA1-246ENST00000476642 PSG8Q9UQ74 426 aa9.54□□□□□ -0.88
HLA-DPA1-246ENST00000476642 LCE6AA0A183 80 aa9.53□□□□□ -0.88
HLA-DPA1-246ENST00000476642 LOC102723971A0A1B0GUV8 181 aa9.53□□□□□ -0.88
HLA-DPA1-246ENST00000476642 C11orf94C9JXX5 98 aa9.53□□□□□ -0.88
HLA-DPA1-246ENST00000476642 C11orf45Q8TAV5 145 aa9.53□□□□□ -0.88
HLA-DPA1-246ENST00000476642 FMC1Q96HJ9 113 aa9.53□□□□□ -0.88
HLA-DPA1-246ENST00000476642 HUWE1Q7Z6Z7 4374 aaKnown RBP9.53□□□□□ -0.88
HLA-DPA1-246ENST00000476642 TRAV8-1A0A0A6YYK1 113 aa9.52□□□□□ -0.89
HLA-DPA1-246ENST00000476642 PDE6DO43924 150 aa9.52□□□□□ -0.89
HLA-DPA1-246ENST00000476642 SPART-AS1P0CW21 52 aa9.52□□□□□ -0.89
HLA-DPA1-246ENST00000476642 AKR1C3P42330 323 aa9.52□□□□□ -0.89
HLA-DPA1-246ENST00000476642 ATP5G3P48201 142 aa9.52□□□□□ -0.89
HLA-DPA1-246ENST00000476642 BTN1A1Q13410 526 aa9.52□□□□□ -0.89
HLA-DPA1-246ENST00000476642 PRNTQ86SH4 94 aa9.52□□□□□ -0.89
HLA-DPA1-246ENST00000476642 TMEM263Q8WUH6 116 aaKnown RBP9.52□□□□□ -0.89
HLA-DPA1-246ENST00000476642 LINC00467Q9BRT7 94 aa9.52□□□□□ -0.89
HLA-DPA1-246ENST00000476642 TENM2Q9NT68 2774 aa9.52□□□□□ -0.89
HLA-DPA1-246ENST00000476642 VAX2Q9UIW0 290 aa9.52□□□□□ -0.89
HLA-DPA1-246ENST00000476642 ZFP30Q9Y2G7 519 aa9.52□□□□□ -0.89
HLA-DPA1-246ENST00000476642 TRAV21A0A0B4J279 112 aa9.51□□□□□ -0.89
HLA-DPA1-246ENST00000476642 TRBV6-1A0A0K0K1D8 114 aa9.51□□□□□ -0.89
HLA-DPA1-246ENST00000476642 CXorf65A6NEN9 183 aa9.51□□□□□ -0.89
HLA-DPA1-246ENST00000476642 ZNF705GA8MUZ8 300 aaPredicted RBP9.51□□□□□ -0.89
HLA-DPA1-246ENST00000476642 ZNF324O75467 553 aaPredicted RBP9.51□□□□□ -0.89
HLA-DPA1-246ENST00000476642 RBMY1A1P0DJD3 496 aaKnown RBP9.51□□□□□ -0.89
HLA-DPA1-246ENST00000476642 RBMY1CP0DJD4 496 aa9.51□□□□□ -0.89
HLA-DPA1-246ENST00000476642 HTN1P15515 57 aa9.51□□□□□ -0.89
HLA-DPA1-246ENST00000476642 CCL20P78556 96 aa9.51□□□□□ -0.89
HLA-DPA1-246ENST00000476642 MEF2BQ02080 365 aaPredicted RBP9.51□□□□□ -0.89
HLA-DPA1-246ENST00000476642 KIR3DS1Q14943 382 aa9.51□□□□□ -0.89
HLA-DPA1-246ENST00000476642 RBMY1FQ15415 496 aaKnown RBP9.51□□□□□ -0.89
HLA-DPA1-246ENST00000476642 Q6AWC8 147 aa9.51□□□□□ -0.89
HLA-DPA1-246ENST00000476642 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.51□□□□□ -0.89
HLA-DPA1-246ENST00000476642 KLF12Q9Y4X4 402 aa9.51□□□□□ -0.89
HLA-DPA1-246ENST00000476642 DEFB4AO15263 64 aa9.5□□□□□ -0.89
HLA-DPA1-246ENST00000476642 IGLV2-11P01706 119 aa9.5□□□□□ -0.89
HLA-DPA1-246ENST00000476642 BCL2P10415 239 aa9.5□□□□□ -0.89
HLA-DPA1-246ENST00000476642 TMEM183BQ1AE95 376 aa9.5□□□□□ -0.89
HLA-DPA1-246ENST00000476642 ANXA2RQ3ZCQ2 193 aa9.5□□□□□ -0.89
HLA-DPA1-246ENST00000476642 FAM159AQ6UWV7 190 aa9.5□□□□□ -0.89
HLA-DPA1-246ENST00000476642 LYPD6BQ8NI32 183 aa9.5□□□□□ -0.89
HLA-DPA1-246ENST00000476642 IGHV1OR15-1A0A075B7D0 117 aa9.49□□□□□ -0.89
HLA-DPA1-246ENST00000476642 CBY3A6NI87 242 aa9.49□□□□□ -0.89
HLA-DPA1-246ENST00000476642 LYRM9A8MSI8 78 aa9.49□□□□□ -0.89
HLA-DPA1-246ENST00000476642 SNURFLB1AK76 121 aa9.49□□□□□ -0.89
HLA-DPA1-246ENST00000476642 SCO1O75880 301 aa9.49□□□□□ -0.89
HLA-DPA1-246ENST00000476642 EMP1P54849 157 aa9.49□□□□□ -0.89
HLA-DPA1-246ENST00000476642 Q86TA4 180 aa9.49□□□□□ -0.89
HLA-DPA1-246ENST00000476642 KCNS1Q96KK3 526 aa9.49□□□□□ -0.89
HLA-DPA1-246ENST00000476642 SGK494Q96LW2 274 aa9.49□□□□□ -0.89
HLA-DPA1-246ENST00000476642 TIMM8BQ9Y5J9 83 aaPredicted RBP9.49□□□□□ -0.89
HLA-DPA1-246ENST00000476642 TRAV34A0A0B4J273 112 aa9.48□□□□□ -0.89
HLA-DPA1-246ENST00000476642 GCGP01275 180 aa9.48□□□□□ -0.89
HLA-DPA1-246ENST00000476642 PFN1P07737 140 aaKnown RBP9.48□□□□□ -0.89
HLA-DPA1-246ENST00000476642 IBA57Q5T440 356 aaKnown RBP9.48□□□□□ -0.89
HLA-DPA1-246ENST00000476642 PRR9Q5T870 116 aa9.48□□□□□ -0.89
HLA-DPA1-246ENST00000476642 RNASE8Q8TDE3 154 aaKnown RBP9.48□□□□□ -0.89
HLA-DPA1-246ENST00000476642 C2CD4CQ8TF44 421 aa9.48□□□□□ -0.89
HLA-DPA1-246ENST00000476642 C11orf52Q96A22 123 aa9.48□□□□□ -0.89
HLA-DPA1-246ENST00000476642 LINC00479Q96M42 142 aa9.48□□□□□ -0.89
HLA-DPA1-246ENST00000476642 TRGV11A0A075B6L2 103 aa9.47□□□□□ -0.89
HLA-DPA1-246ENST00000476642 SCO2A0A1W2PP80 73 aa9.47□□□□□ -0.89
HLA-DPA1-246ENST00000476642 NUPR2A6NF83 97 aa9.47□□□□□ -0.89
HLA-DPA1-246ENST00000476642 FABP5P3A8MUU1 101 aa9.47□□□□□ -0.89
HLA-DPA1-246ENST00000476642 NDUFS6O75380 124 aaKnown RBP9.47□□□□□ -0.89
HLA-DPA1-246ENST00000476642 TVP23CQ96ET8 276 aa9.47□□□□□ -0.89
HLA-DPA1-246ENST00000476642 DKK2Q9UBU2 259 aa9.47□□□□□ -0.89
HLA-DPA1-246ENST00000476642 RBFOX3A6NFN3 312 aa9.46□□□□□ -0.9
HLA-DPA1-246ENST00000476642 LTAP01374 205 aa9.46□□□□□ -0.9
HLA-DPA1-246ENST00000476642 AZU1P20160 251 aa9.46□□□□□ -0.9
HLA-DPA1-246ENST00000476642 CTAG1AP78358 180 aa9.46□□□□□ -0.9
HLA-DPA1-246ENST00000476642 S100A12P80511 92 aa9.46□□□□□ -0.9
HLA-DPA1-246ENST00000476642 ZNF415Q09FC8 603 aa9.46□□□□□ -0.9
HLA-DPA1-246ENST00000476642 TDRG1Q3Y452 100 aa9.46□□□□□ -0.9
HLA-DPA1-246ENST00000476642 FAM222AQ5U5X8 452 aa9.46□□□□□ -0.9
HLA-DPA1-246ENST00000476642 UQCC3Q6UW78 93 aa9.46□□□□□ -0.9
HLA-DPA1-246ENST00000476642 COX8CQ7Z4L0 72 aa9.46□□□□□ -0.9
HLA-DPA1-246ENST00000476642 TMEM183AQ8IXX5 376 aa9.46□□□□□ -0.9
HLA-DPA1-246ENST00000476642 SMIM12Q96EX1 92 aa9.46□□□□□ -0.9
HLA-DPA1-246ENST00000476642 C8orf49Q96NF6 230 aa9.46□□□□□ -0.9
HLA-DPA1-246ENST00000476642 SDF2L1Q9HCN8 221 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms