RNA–Protein interactions for RNA: ENST00000476085.1

MSH5-SAPCD1-205, Transcript of MSH5-SAPCD1 readthrough (NMD candidate), humanhuman

APPRIS ALT2 TSL 2

Gene MSH5-SAPCD1, Length 950 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-SAPCD1-205ENST00000476085 SCGB1C1Q8TD33 95 aa8.4□□□□□ -1.06
MSH5-SAPCD1-205ENST00000476085 WDR61Q9GZS3 305 aaKnown RBP8.4□□□□□ -1.06
MSH5-SAPCD1-205ENST00000476085 FUT9Q9Y231 359 aa8.4□□□□□ -1.06
MSH5-SAPCD1-205ENST00000476085 TIMM9Q9Y5J7 89 aa8.4□□□□□ -1.06
MSH5-SAPCD1-205ENST00000476085 ICAM4Q14773 271 aa8.39□□□□□ -1.07
MSH5-SAPCD1-205ENST00000476085 MIR17HGQ75NE6 70 aa8.39□□□□□ -1.07
MSH5-SAPCD1-205ENST00000476085 MAPKAPK5-AS1Q8N8E1 139 aa8.39□□□□□ -1.07
MSH5-SAPCD1-205ENST00000476085 BLNKQ8WV28 456 aa8.39□□□□□ -1.07
MSH5-SAPCD1-205ENST00000476085 FXYD5Q96DB9 178 aa8.39□□□□□ -1.07
MSH5-SAPCD1-205ENST00000476085 ST6GAL2Q96JF0 529 aa8.39□□□□□ -1.07
MSH5-SAPCD1-205ENST00000476085 TP53TG3Q9ULZ0 132 aa8.39□□□□□ -1.07
MSH5-SAPCD1-205ENST00000476085 TRGV2A0A075B6R0 118 aa8.38□□□□□ -1.07
MSH5-SAPCD1-205ENST00000476085 IGKV2-40A0A087WW87 121 aaPredicted RBP8.38□□□□□ -1.07
MSH5-SAPCD1-205ENST00000476085 TRGV1A0A0A0MS02 117 aa8.38□□□□□ -1.07
MSH5-SAPCD1-205ENST00000476085 IGKV2D-40P01614 121 aaPredicted RBP8.38□□□□□ -1.07
MSH5-SAPCD1-205ENST00000476085 GPX1P07203 203 aa8.38□□□□□ -1.07
MSH5-SAPCD1-205ENST00000476085 ZNF266Q14584 549 aa8.38□□□□□ -1.07
MSH5-SAPCD1-205ENST00000476085 INO80EQ8NBZ0 244 aaPredicted RBP8.38□□□□□ -1.07
MSH5-SAPCD1-205ENST00000476085 OR51M1Q9H341 326 aa8.38□□□□□ -1.07
MSH5-SAPCD1-205ENST00000476085 AAMDCQ9H7C9 122 aa8.38□□□□□ -1.07
MSH5-SAPCD1-205ENST00000476085 IGHV1OR15-1A0A075B7D0 117 aa8.37□□□□□ -1.07
MSH5-SAPCD1-205ENST00000476085 SIVA1O15304 175 aa8.37□□□□□ -1.07
MSH5-SAPCD1-205ENST00000476085 LINC00315P59091 139 aa8.37□□□□□ -1.07
MSH5-SAPCD1-205ENST00000476085 FHL2Q14192 279 aa8.37□□□□□ -1.07
MSH5-SAPCD1-205ENST00000476085 TMEM78Q5T7P6 136 aa8.37□□□□□ -1.07
MSH5-SAPCD1-205ENST00000476085 AQP10Q96PS8 301 aa8.37□□□□□ -1.07
MSH5-SAPCD1-205ENST00000476085 RBAKDNA6NC62 111 aa8.36□□□□□ -1.07
MSH5-SAPCD1-205ENST00000476085 ZNF138P52744 262 aa8.36□□□□□ -1.07
MSH5-SAPCD1-205ENST00000476085 CRYBA4P53673 196 aa8.36□□□□□ -1.07
MSH5-SAPCD1-205ENST00000476085 SLAQ13239 276 aa8.36□□□□□ -1.07
MSH5-SAPCD1-205ENST00000476085 FAM122CQ6P4D5 195 aa8.36□□□□□ -1.07
MSH5-SAPCD1-205ENST00000476085 IQCF2Q8IXL9 164 aa8.36□□□□□ -1.07
MSH5-SAPCD1-205ENST00000476085 LYPD1Q8N2G4 141 aa8.36□□□□□ -1.07
MSH5-SAPCD1-205ENST00000476085 OR2T35Q8NGX2 323 aa8.36□□□□□ -1.07
MSH5-SAPCD1-205ENST00000476085 PHYHIPLQ96FC7 376 aa8.36□□□□□ -1.07
MSH5-SAPCD1-205ENST00000476085 PAXXQ9BUH6 204 aa8.36□□□□□ -1.07
MSH5-SAPCD1-205ENST00000476085 MRPL32Q9BYC8 188 aaKnown RBP8.36□□□□□ -1.07
MSH5-SAPCD1-205ENST00000476085 SMIM3Q9BZL3 60 aa8.36□□□□□ -1.07
MSH5-SAPCD1-205ENST00000476085 PRO0255Q9UI72 69 aa8.36□□□□□ -1.07
MSH5-SAPCD1-205ENST00000476085 RGS13O14921 159 aa8.35□□□□□ -1.07
MSH5-SAPCD1-205ENST00000476085 PAX4O43316 350 aa8.35□□□□□ -1.07
MSH5-SAPCD1-205ENST00000476085 OR10J4P0C629 311 aa8.35□□□□□ -1.07
MSH5-SAPCD1-205ENST00000476085 Q6AWC8 147 aa8.35□□□□□ -1.07
MSH5-SAPCD1-205ENST00000476085 LYPD5Q6UWN5 251 aa8.35□□□□□ -1.07
MSH5-SAPCD1-205ENST00000476085 RASL10AQ92737 203 aa8.35□□□□□ -1.07
MSH5-SAPCD1-205ENST00000476085 MRPL16Q9NX20 251 aaKnown RBP8.35□□□□□ -1.07
MSH5-SAPCD1-205ENST00000476085 HHLA3Q9XRX5 114 aa8.35□□□□□ -1.07
MSH5-SAPCD1-205ENST00000476085 LENEPQ9Y5L5 61 aa8.35□□□□□ -1.07
MSH5-SAPCD1-205ENST00000476085 ICOSQ9Y6W8 199 aa8.35□□□□□ -1.07
MSH5-SAPCD1-205ENST00000476085 NXPH4O95158 308 aa8.34□□□□□ -1.07
MSH5-SAPCD1-205ENST00000476085 FFAR4Q5NUL3 377 aa8.34□□□□□ -1.07
MSH5-SAPCD1-205ENST00000476085 DMRTA1Q5VZB9 504 aa8.34□□□□□ -1.07
MSH5-SAPCD1-205ENST00000476085 SCRT2Q9NQ03 307 aa8.34□□□□□ -1.07
MSH5-SAPCD1-205ENST00000476085 MDFICQ9P1T7 246 aa8.34□□□□□ -1.07
MSH5-SAPCD1-205ENST00000476085 FXYD6-FXYD2A0A087WZ82 144 aa8.33□□□□□ -1.08
MSH5-SAPCD1-205ENST00000476085 DIRC3C9JPN6 131 aa8.33□□□□□ -1.08
MSH5-SAPCD1-205ENST00000476085 IGHV3-53P01767 116 aa8.33□□□□□ -1.08
MSH5-SAPCD1-205ENST00000476085 TAS2R45P59539 299 aa8.33□□□□□ -1.08
MSH5-SAPCD1-205ENST00000476085 MRPL23Q16540 153 aaKnown RBP8.33□□□□□ -1.08
MSH5-SAPCD1-205ENST00000476085 ACOT6Q3I5F7 207 aaPredicted RBP8.33□□□□□ -1.08
MSH5-SAPCD1-205ENST00000476085 TDRG1Q3Y452 100 aa8.33□□□□□ -1.08
MSH5-SAPCD1-205ENST00000476085 OR10G4Q8NGN3 311 aa8.33□□□□□ -1.08
MSH5-SAPCD1-205ENST00000476085 Q8TAT8 98 aa8.33□□□□□ -1.08
MSH5-SAPCD1-205ENST00000476085 TMED6Q8WW62 240 aa8.33□□□□□ -1.08
MSH5-SAPCD1-205ENST00000476085 PGPEP1Q9NXJ5 209 aa8.33□□□□□ -1.08
MSH5-SAPCD1-205ENST00000476085 TNFSF18Q9UNG2 199 aa8.33□□□□□ -1.08
MSH5-SAPCD1-205ENST00000476085 TNFRSF18Q9Y5U5 241 aa8.33□□□□□ -1.08
MSH5-SAPCD1-205ENST00000476085 BORCS7-ASMTA0A0B4J1R7 106 aa8.32□□□□□ -1.08
MSH5-SAPCD1-205ENST00000476085 TAAR5O14804 337 aa8.32□□□□□ -1.08
MSH5-SAPCD1-205ENST00000476085 MBP02144 154 aa8.32□□□□□ -1.08
MSH5-SAPCD1-205ENST00000476085 RANP62826 216 aaKnown RBP8.32□□□□□ -1.08
MSH5-SAPCD1-205ENST00000476085 SERF2P84101 59 aa8.32□□□□□ -1.08
MSH5-SAPCD1-205ENST00000476085 ZNF415Q09FC8 603 aa8.32□□□□□ -1.08
MSH5-SAPCD1-205ENST00000476085 KHDC3LQ587J8 217 aa8.32□□□□□ -1.08
MSH5-SAPCD1-205ENST00000476085 Q5BKY6 102 aa8.32□□□□□ -1.08
MSH5-SAPCD1-205ENST00000476085 ZNF479Q96JC4 524 aa8.32□□□□□ -1.08
MSH5-SAPCD1-205ENST00000476085 C8orf49Q96NF6 230 aa8.32□□□□□ -1.08
MSH5-SAPCD1-205ENST00000476085 SPXQ9BT56 116 aa8.32□□□□□ -1.08
MSH5-SAPCD1-205ENST00000476085 WFDC1Q9HC57 220 aa8.32□□□□□ -1.08
MSH5-SAPCD1-205ENST00000476085 A0A1W2PPV4 95 aa8.31□□□□□ -1.08
MSH5-SAPCD1-205ENST00000476085 K7EP13 123 aa8.31□□□□□ -1.08
MSH5-SAPCD1-205ENST00000476085 K7EQD1 137 aa8.31□□□□□ -1.08
MSH5-SAPCD1-205ENST00000476085 XGP55808 180 aa8.31□□□□□ -1.08
MSH5-SAPCD1-205ENST00000476085 NEGR1Q7Z3B1 354 aa8.31□□□□□ -1.08
MSH5-SAPCD1-205ENST00000476085 ARL6IP6Q8N6S5 226 aa8.31□□□□□ -1.08
MSH5-SAPCD1-205ENST00000476085 OR2G3Q8NGZ4 309 aa8.31□□□□□ -1.08
MSH5-SAPCD1-205ENST00000476085 ARPC5LQ9BPX5 153 aa8.31□□□□□ -1.08
MSH5-SAPCD1-205ENST00000476085 PSMG3Q9BT73 122 aaPredicted RBP8.31□□□□□ -1.08
MSH5-SAPCD1-205ENST00000476085 RNF222A6NCQ9 220 aa8.3□□□□□ -1.08
MSH5-SAPCD1-205ENST00000476085 OR7C2O60412 319 aa8.3□□□□□ -1.08
MSH5-SAPCD1-205ENST00000476085 SFTA3P0C7M3 94 aa8.3□□□□□ -1.08
MSH5-SAPCD1-205ENST00000476085 CSN1S1P47710 185 aa8.3□□□□□ -1.08
MSH5-SAPCD1-205ENST00000476085 MUC21Q5SSG8 566 aa8.3□□□□□ -1.08
MSH5-SAPCD1-205ENST00000476085 CDPF1Q6NVV7 123 aa8.3□□□□□ -1.08
MSH5-SAPCD1-205ENST00000476085 TVP23CQ96ET8 276 aa8.3□□□□□ -1.08
MSH5-SAPCD1-205ENST00000476085 DNAH10OSP0CZ25 163 aa8.29□□□□□ -1.08
MSH5-SAPCD1-205ENST00000476085 TMEM183BQ1AE95 376 aa8.29□□□□□ -1.08
MSH5-SAPCD1-205ENST00000476085 PQLC2Q6ZP29 291 aa8.29□□□□□ -1.08
MSH5-SAPCD1-205ENST00000476085 NFE4Q86UQ8 179 aa8.29□□□□□ -1.08
MSH5-SAPCD1-205ENST00000476085 TMEM183AQ8IXX5 376 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 168.2 ms