RNA–Protein interactions for RNA: ENST00000475558.5

SHQ1-207, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 5

Gene SHQ1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-207ENST00000475558 SLC17A3O00476 420 aa5.26□□□□□ -1.57
SHQ1-207ENST00000475558 SAP30O75446 220 aa5.26□□□□□ -1.57
SHQ1-207ENST00000475558 IGLV1-51P01701 117 aa5.26□□□□□ -1.57
SHQ1-207ENST00000475558 AMBPP02760 352 aa5.26□□□□□ -1.57
SHQ1-207ENST00000475558 ADCYAP1P18509 176 aa5.26□□□□□ -1.57
SHQ1-207ENST00000475558 NUTF2P61970 127 aaKnown RBP5.26□□□□□ -1.57
SHQ1-207ENST00000475558 GUCA2BQ16661 112 aa5.26□□□□□ -1.57
SHQ1-207ENST00000475558 CENPWQ5EE01 88 aa5.26□□□□□ -1.57
SHQ1-207ENST00000475558 CT83Q5H943 113 aa5.26□□□□□ -1.57
SHQ1-207ENST00000475558 PRNTQ86SH4 94 aa5.26□□□□□ -1.57
SHQ1-207ENST00000475558 LINC00482Q8N8I6 264 aa5.26□□□□□ -1.57
SHQ1-207ENST00000475558 OR8A1Q8NGG7 326 aa5.26□□□□□ -1.57
SHQ1-207ENST00000475558 ISOC2Q96AB3 205 aa5.26□□□□□ -1.57
SHQ1-207ENST00000475558 IGF2BP2-AS1Q96M15 143 aa5.26□□□□□ -1.57
SHQ1-207ENST00000475558 PRR25Q96S07 402 aa5.26□□□□□ -1.57
SHQ1-207ENST00000475558 ZNF492Q9P255 531 aa5.26□□□□□ -1.57
SHQ1-207ENST00000475558 NPIPB6E9PJ23 425 aa5.25□□□□□ -1.57
SHQ1-207ENST00000475558 M0R3E3 92 aa5.25□□□□□ -1.57
SHQ1-207ENST00000475558 GATCO43716 136 aaKnown RBP5.25□□□□□ -1.57
SHQ1-207ENST00000475558 IGLV2-11P01706 119 aa5.25□□□□□ -1.57
SHQ1-207ENST00000475558 P01737 135 aa5.25□□□□□ -1.57
SHQ1-207ENST00000475558 SNRPCP09234 159 aaKnown RBP5.25□□□□□ -1.57
SHQ1-207ENST00000475558 NHLRC4P0CG21 123 aaPredicted RBP5.25□□□□□ -1.57
SHQ1-207ENST00000475558 MGST1P10620 155 aaKnown RBP5.25□□□□□ -1.57
SHQ1-207ENST00000475558 LEPP41159 167 aa5.25□□□□□ -1.57
SHQ1-207ENST00000475558 HIST1H1AQ02539 215 aaPredicted RBP5.25□□□□□ -1.57
SHQ1-207ENST00000475558 CD300EQ496F6 205 aaPredicted RBP5.25□□□□□ -1.57
SHQ1-207ENST00000475558 IBA57Q5T440 356 aaKnown RBP5.25□□□□□ -1.57
SHQ1-207ENST00000475558 FAM162BQ5T6X4 162 aa5.25□□□□□ -1.57
SHQ1-207ENST00000475558 Q6AWC8 147 aa5.25□□□□□ -1.57
SHQ1-207ENST00000475558 WFDC3Q8IUB2 231 aa5.25□□□□□ -1.57
SHQ1-207ENST00000475558 KRTAP4-9Q9BYQ8 210 aa5.25□□□□□ -1.57
SHQ1-207ENST00000475558 GFRA4Q9GZZ7 299 aa5.25□□□□□ -1.57
SHQ1-207ENST00000475558 AGPAT4-IT1Q9H0P7 198 aa5.25□□□□□ -1.57
SHQ1-207ENST00000475558 RPH3ALQ9UNE2 315 aa5.25□□□□□ -1.57
SHQ1-207ENST00000475558 TRAV34A0A0B4J273 112 aa5.24□□□□□ -1.57
SHQ1-207ENST00000475558 TRAV21A0A0B4J279 112 aa5.24□□□□□ -1.57
SHQ1-207ENST00000475558 A0A1W2PPQ1 181 aa5.24□□□□□ -1.57
SHQ1-207ENST00000475558 ZNF705GA8MUZ8 300 aaPredicted RBP5.24□□□□□ -1.57
SHQ1-207ENST00000475558 ZNF705FA8MVS1 300 aaPredicted RBP5.24□□□□□ -1.57
SHQ1-207ENST00000475558 OR11H12B2RN74 326 aa5.24□□□□□ -1.57
SHQ1-207ENST00000475558 C3orf84H3BNL1 204 aa5.24□□□□□ -1.57
SHQ1-207ENST00000475558 CRISP2P16562 243 aa5.24□□□□□ -1.57
SHQ1-207ENST00000475558 FOXA3P55318 350 aaPredicted RBP5.24□□□□□ -1.57
SHQ1-207ENST00000475558 KRTAP10-11P60412 298 aa5.24□□□□□ -1.57
SHQ1-207ENST00000475558 GNG5P63218 68 aa5.24□□□□□ -1.57
SHQ1-207ENST00000475558 EGFEM1PQ0D2K5 195 aa5.24□□□□□ -1.57
SHQ1-207ENST00000475558 RNF212Q495C1 297 aa5.24□□□□□ -1.57
SHQ1-207ENST00000475558 ADAMTSL5Q6ZMM2 481 aa5.24□□□□□ -1.57
SHQ1-207ENST00000475558 Q86TA4 180 aa5.24□□□□□ -1.57
SHQ1-207ENST00000475558 TMEM61Q8N0U2 210 aa5.24□□□□□ -1.57
SHQ1-207ENST00000475558 GBGT1Q8N5D6 347 aa5.24□□□□□ -1.57
SHQ1-207ENST00000475558 KCNS1Q96KK3 526 aa5.24□□□□□ -1.57
SHQ1-207ENST00000475558 LINC00479Q96M42 142 aa5.24□□□□□ -1.57
SHQ1-207ENST00000475558 DUX3Q96PT4 197 aa5.24□□□□□ -1.57
SHQ1-207ENST00000475558 C20orf144Q9BQM9 153 aa5.24□□□□□ -1.57
SHQ1-207ENST00000475558 DERL1Q9BUN8 251 aa5.24□□□□□ -1.57
SHQ1-207ENST00000475558 IGKV3-7A0A075B6H7 116 aa5.23□□□□□ -1.57
SHQ1-207ENST00000475558 A0A0J9YX75 114 aa5.23□□□□□ -1.57
SHQ1-207ENST00000475558 F2Z2F3 143 aa5.23□□□□□ -1.57
SHQ1-207ENST00000475558 IGLV2-8P01709 118 aa5.23□□□□□ -1.57
SHQ1-207ENST00000475558 S100A8P05109 93 aa5.23□□□□□ -1.57
SHQ1-207ENST00000475558 GPX1P07203 203 aa5.23□□□□□ -1.57
SHQ1-207ENST00000475558 PFN1P07737 140 aaKnown RBP5.23□□□□□ -1.57
SHQ1-207ENST00000475558 CXCL1P09341 107 aa5.23□□□□□ -1.57
SHQ1-207ENST00000475558 BTN1A1Q13410 526 aa5.23□□□□□ -1.57
SHQ1-207ENST00000475558 PSMG4Q5JS54 123 aa5.23□□□□□ -1.57
SHQ1-207ENST00000475558 WDR73Q6P4I2 378 aa5.23□□□□□ -1.57
SHQ1-207ENST00000475558 RASL11AQ6T310 242 aa5.23□□□□□ -1.57
SHQ1-207ENST00000475558 GTSCR1Q86UQ5 136 aa5.23□□□□□ -1.57
SHQ1-207ENST00000475558 APRG1Q8IVJ8 170 aa5.23□□□□□ -1.57
SHQ1-207ENST00000475558 NUDT10Q8NFP7 164 aa5.23□□□□□ -1.57
SHQ1-207ENST00000475558 BORCS7Q96B45 105 aa5.23□□□□□ -1.57
SHQ1-207ENST00000475558 NUDT11Q96G61 164 aa5.23□□□□□ -1.57
SHQ1-207ENST00000475558 C1QTNF4Q9BXJ3 329 aa5.23□□□□□ -1.57
SHQ1-207ENST00000475558 IL36BQ9NZH7 164 aa5.23□□□□□ -1.57
SHQ1-207ENST00000475558 NAT8BQ9UHF3 227 aa5.23□□□□□ -1.57
SHQ1-207ENST00000475558 ZNF256Q9Y2P7 627 aaPredicted RBP5.23□□□□□ -1.57
SHQ1-207ENST00000475558 U3KQK5 164 aa5.23□□□□□ -1.57
SHQ1-207ENST00000475558 DYNC2H1Q8NCM8 4307 aaKnown RBP5.23□□□□□ -1.57
SHQ1-207ENST00000475558 BIRC6Q9NR09 4857 aa5.23□□□□□ -1.57
SHQ1-207ENST00000475558 RYR2Q92736 4967 aa5.23□□□□□ -1.57
SHQ1-207ENST00000475558 TRBV20OR9-2A0A075B6H5 130 aa5.22□□□□□ -1.57
SHQ1-207ENST00000475558 TRBV24-1A0A075B6N3 115 aa5.22□□□□□ -1.57
SHQ1-207ENST00000475558 IGKV2-40A0A087WW87 121 aaPredicted RBP5.22□□□□□ -1.57
SHQ1-207ENST00000475558 A0A1B0GW15 77 aa5.22□□□□□ -1.57
SHQ1-207ENST00000475558 TMEM189A5PLL7 270 aa5.22□□□□□ -1.57
SHQ1-207ENST00000475558 C19orf71A6NCJ1 209 aa5.22□□□□□ -1.57
SHQ1-207ENST00000475558 IGKV2D-40P01614 121 aaPredicted RBP5.22□□□□□ -1.57
SHQ1-207ENST00000475558 ZNF688P0C7X2 276 aa5.22□□□□□ -1.57
SHQ1-207ENST00000475558 HLA-DRB4P13762 266 aa5.22□□□□□ -1.57
SHQ1-207ENST00000475558 CDKN1BP46527 198 aa5.22□□□□□ -1.57
SHQ1-207ENST00000475558 TFPI2P48307 235 aa5.22□□□□□ -1.57
SHQ1-207ENST00000475558 DEFB131AP59861 70 aa5.22□□□□□ -1.57
SHQ1-207ENST00000475558 IGFL4Q6B9Z1 124 aa5.22□□□□□ -1.57
SHQ1-207ENST00000475558 MORN3Q6PF18 240 aaPredicted RBP5.22□□□□□ -1.57
SHQ1-207ENST00000475558 STHQ8IWL8 128 aa5.22□□□□□ -1.57
SHQ1-207ENST00000475558 RNF182Q8N6D2 247 aa5.22□□□□□ -1.57
SHQ1-207ENST00000475558 TSKUQ8WUA8 353 aa5.22□□□□□ -1.57
SHQ1-207ENST00000475558 C20orf173Q96LM9 149 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms