RNA–Protein interactions for RNA: ENST00000475401.1

TM9SF3-204, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 2

Gene TM9SF3, Length 511 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-204ENST00000475401 TRAV14DV4A0A0A6YYC5 116 aa1.91□□□□□ -2.1
TM9SF3-204ENST00000475401 PNMA8CA0A1B0GUJ8 204 aa1.91□□□□□ -2.1
TM9SF3-204ENST00000475401 PCBD1P61457 104 aa1.91□□□□□ -2.1
TM9SF3-204ENST00000475401 MIR22HGQ0VDD5 57 aa1.91□□□□□ -2.1
TM9SF3-204ENST00000475401 MYH6P13533 1939 aa1.91□□□□□ -2.1
TM9SF3-204ENST00000475401 SPEF2Q9C093 1822 aa1.91□□□□□ -2.1
TM9SF3-204ENST00000475401 FN1P02751 2386 aaKnown RBP1.91□□□□□ -2.1
TM9SF3-204ENST00000475401 SMG6Q86US8 1419 aaKnown RBP1.91□□□□□ -2.1
TM9SF3-204ENST00000475401 UHRF1BP1LA0JNW5 1464 aa1.9□□□□□ -2.11
TM9SF3-204ENST00000475401 FAM92AA1XBS5 289 aa1.9□□□□□ -2.11
TM9SF3-204ENST00000475401 M0R2P5 195 aa1.9□□□□□ -2.11
TM9SF3-204ENST00000475401 PITX3O75364 302 aa1.9□□□□□ -2.11
TM9SF3-204ENST00000475401 PRB1P04280 392 aa1.9□□□□□ -2.11
TM9SF3-204ENST00000475401 CKS2P33552 79 aa1.9□□□□□ -2.11
TM9SF3-204ENST00000475401 CCSMST1Q4G0I0 132 aa1.9□□□□□ -2.11
TM9SF3-204ENST00000475401 IZUMO2Q6UXV1 221 aa1.9□□□□□ -2.11
TM9SF3-204ENST00000475401 ZCCHC23Q6ZST2 131 aa1.9□□□□□ -2.11
TM9SF3-204ENST00000475401 NAA38Q9BRA0 125 aaKnown RBP1.9□□□□□ -2.11
TM9SF3-204ENST00000475401 IFITM5A6NNB3 132 aa1.89□□□□□ -2.11
TM9SF3-204ENST00000475401 ZNF736B4DX44 427 aaPredicted RBP1.89□□□□□ -2.11
TM9SF3-204ENST00000475401 CCL16O15467 120 aa1.89□□□□□ -2.11
TM9SF3-204ENST00000475401 YPEL1O60688 119 aa1.89□□□□□ -2.11
TM9SF3-204ENST00000475401 S100A1P23297 94 aa1.89□□□□□ -2.11
TM9SF3-204ENST00000475401 NEDD8Q15843 81 aa1.89□□□□□ -2.11
TM9SF3-204ENST00000475401 CLLU1Q5K131 121 aa1.89□□□□□ -2.11
TM9SF3-204ENST00000475401 ATOH7Q8N100 152 aa1.89□□□□□ -2.11
TM9SF3-204ENST00000475401 OR10AG1Q8NH19 301 aa1.89□□□□□ -2.11
TM9SF3-204ENST00000475401 CIB3Q96Q77 187 aaPredicted RBP1.89□□□□□ -2.11
TM9SF3-204ENST00000475401 CEP192Q8TEP8 1941 aa1.89□□□□□ -2.11
TM9SF3-204ENST00000475401 DOCK10Q96BY6 2186 aa1.89□□□□□ -2.11
TM9SF3-204ENST00000475401 KIAA1549LQ6ZVL6 1849 aa1.89□□□□□ -2.11
TM9SF3-204ENST00000475401 SIPA1L2Q9P2F8 1722 aaPredicted RBP1.88□□□□□ -2.11
TM9SF3-204ENST00000475401 ZNF518AQ6AHZ1 1483 aa1.88□□□□□ -2.11
TM9SF3-204ENST00000475401 MBD5Q9P267 1494 aa1.88□□□□□ -2.11
TM9SF3-204ENST00000475401 GBF1Q92538 1859 aa1.88□□□□□ -2.11
TM9SF3-204ENST00000475401 KIDINS220Q9ULH0 1771 aa1.88□□□□□ -2.11
TM9SF3-204ENST00000475401 MYH13Q9UKX3 1938 aa1.88□□□□□ -2.11
TM9SF3-204ENST00000475401 TRBV6-8A0A0A6YYG3 113 aa1.88□□□□□ -2.11
TM9SF3-204ENST00000475401 CDC42EP2O14613 210 aa1.88□□□□□ -2.11
TM9SF3-204ENST00000475401 HYPMO75409 117 aa1.88□□□□□ -2.11
TM9SF3-204ENST00000475401 IFNGP01579 166 aa1.88□□□□□ -2.11
TM9SF3-204ENST00000475401 IGHV3-33P01772 117 aa1.88□□□□□ -2.11
TM9SF3-204ENST00000475401 RBP4P02753 201 aa1.88□□□□□ -2.11
TM9SF3-204ENST00000475401 CD2P06729 351 aa1.88□□□□□ -2.11
TM9SF3-204ENST00000475401 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.88□□□□□ -2.11
TM9SF3-204ENST00000475401 ATP11AUNQ6ZP68 121 aa1.88□□□□□ -2.11
TM9SF3-204ENST00000475401 TMEM203Q969S6 136 aa1.88□□□□□ -2.11
TM9SF3-204ENST00000475401 DPH3Q96FX2 82 aa1.88□□□□□ -2.11
TM9SF3-204ENST00000475401 LINC00052Q96N35 136 aa1.88□□□□□ -2.11
TM9SF3-204ENST00000475401 SAR1AQ9NR31 198 aa1.88□□□□□ -2.11
TM9SF3-204ENST00000475401 FGD6Q6ZV73 1430 aa1.88□□□□□ -2.11
TM9SF3-204ENST00000475401 FREM3P0C091 2139 aa1.88□□□□□ -2.11
TM9SF3-204ENST00000475401 IGHV1-24A0A0C4DH33 117 aa1.87□□□□□ -2.11
TM9SF3-204ENST00000475401 TRBV6-5A0A0K0K1A5 114 aa1.87□□□□□ -2.11
TM9SF3-204ENST00000475401 C3orf85A0A1B0GTC6 90 aa1.87□□□□□ -2.11
TM9SF3-204ENST00000475401 ADGRB2O60241 1585 aa1.87□□□□□ -2.11
TM9SF3-204ENST00000475401 ARL14EPLP0DKL9 152 aa1.87□□□□□ -2.11
TM9SF3-204ENST00000475401 PYYP10082 97 aa1.87□□□□□ -2.11
TM9SF3-204ENST00000475401 SCIMPQ6UWF3 145 aa1.87□□□□□ -2.11
TM9SF3-204ENST00000475401 CASC2Q6XLA1 102 aa1.87□□□□□ -2.11
TM9SF3-204ENST00000475401 ZNF431Q8TF32 576 aaPredicted RBP1.87□□□□□ -2.11
TM9SF3-204ENST00000475401 SCN3AQ9NY46 2000 aa1.87□□□□□ -2.11
TM9SF3-204ENST00000475401 CCDC167Q9P0B6 97 aa1.87□□□□□ -2.11
TM9SF3-204ENST00000475401 FBN3Q75N90 2809 aa1.87□□□□□ -2.11
TM9SF3-204ENST00000475401 HELZP42694 1942 aaKnown RBP1.87□□□□□ -2.11
TM9SF3-204ENST00000475401 PCDH15Q96QU1 1955 aa1.87□□□□□ -2.11
TM9SF3-204ENST00000475401 DIDO1Q9BTC0 2240 aaKnown RBP1.86□□□□□ -2.11
TM9SF3-204ENST00000475401 MYH7P12883 1935 aa1.86□□□□□ -2.11
TM9SF3-204ENST00000475401 LOC100130705A0A1B0GUX0 176 aa1.86□□□□□ -2.11
TM9SF3-204ENST00000475401 MRPS14O60783 128 aaKnown RBP1.86□□□□□ -2.11
TM9SF3-204ENST00000475401 APODP05090 189 aa1.86□□□□□ -2.11
TM9SF3-204ENST00000475401 COX7CP15954 63 aa1.86□□□□□ -2.11
TM9SF3-204ENST00000475401 BTG2P78543 158 aa1.86□□□□□ -2.11
TM9SF3-204ENST00000475401 WHAMMP3Q1A5X7 153 aa1.86□□□□□ -2.11
TM9SF3-204ENST00000475401 ATP6V0E2Q8NHE4 81 aa1.86□□□□□ -2.11
TM9SF3-204ENST00000475401 ORMDL1Q9P0S3 153 aa1.86□□□□□ -2.11
TM9SF3-204ENST00000475401 CECR2Q9BXF3 1484 aa1.86□□□□□ -2.11
TM9SF3-204ENST00000475401 RTTNQ86VV8 2226 aa1.86□□□□□ -2.11
TM9SF3-204ENST00000475401 FAM135AQ9P2D6 1515 aa1.86□□□□□ -2.11
TM9SF3-204ENST00000475401 MUC4Q99102 2169 aa1.85□□□□□ -2.11
TM9SF3-204ENST00000475401 BAZ2BQ9UIF8 2168 aaKnown RBP1.85□□□□□ -2.11
TM9SF3-204ENST00000475401 LOC107984156A0A0G2JMH3 177 aa1.85□□□□□ -2.11
TM9SF3-204ENST00000475401 A0A0G2JMM0 328 aa1.85□□□□□ -2.11
TM9SF3-204ENST00000475401 A0A1W2PPB8 328 aa1.85□□□□□ -2.11
TM9SF3-204ENST00000475401 KIR3DP1A8MWS1 328 aa1.85□□□□□ -2.11
TM9SF3-204ENST00000475401 S100PP25815 95 aa1.85□□□□□ -2.11
TM9SF3-204ENST00000475401 GUCA1AP43080 201 aaPredicted RBP1.85□□□□□ -2.11
TM9SF3-204ENST00000475401 TEX261Q6UWH6 196 aa1.85□□□□□ -2.11
TM9SF3-204ENST00000475401 ARL17AQ8IVW1 177 aa1.85□□□□□ -2.11
TM9SF3-204ENST00000475401 SMIM7Q9BQ49 75 aa1.85□□□□□ -2.11
TM9SF3-204ENST00000475401 MED12LQ86YW9 2145 aa1.85□□□□□ -2.11
TM9SF3-204ENST00000475401 PTPRFP10586 1907 aa1.85□□□□□ -2.11
TM9SF3-204ENST00000475401 ATG2AQ2TAZ0 1938 aa1.85□□□□□ -2.11
TM9SF3-204ENST00000475401 EIF4G3O43432 1585 aaKnown RBP1.85□□□□□ -2.11
TM9SF3-204ENST00000475401 KIF13AQ9H1H9 1805 aa1.84□□□□□ -2.11
TM9SF3-204ENST00000475401 TRBV6-4A0A1B0GX49 114 aa1.84□□□□□ -2.11
TM9SF3-204ENST00000475401 IGKV2-29A2NJV5 120 aaPredicted RBP1.84□□□□□ -2.11
TM9SF3-204ENST00000475401 M0R129 80 aa1.84□□□□□ -2.11
TM9SF3-204ENST00000475401 M0R2N4 97 aa1.84□□□□□ -2.11
TM9SF3-204ENST00000475401 NUPR1O60356 82 aa1.84□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms