RNA–Protein interactions for RNA: ENST00000474617.1

CCM2-206, Transcript of CCM2 scaffold protein, humanhuman

TSL 5 BASIC

Gene CCM2, Length 1,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-206ENST00000474617 ODF3Q96PU9 254 aa16.48■□□□□ 0.23
CCM2-206ENST00000474617 U3KQK5 164 aa16.48■□□□□ 0.23
CCM2-206ENST00000474617 CACNG7P62955 275 aa16.47■□□□□ 0.23
CCM2-206ENST00000474617 NIT1Q86X76 327 aa16.47■□□□□ 0.23
CCM2-206ENST00000474617 LAMTOR2Q9Y2Q5 125 aa16.47■□□□□ 0.23
CCM2-206ENST00000474617 SNRPD3P62318 126 aaKnown RBP16.46■□□□□ 0.23
CCM2-206ENST00000474617 DCANP1Q8TF63 244 aa16.46■□□□□ 0.23
CCM2-206ENST00000474617 DOPEY2Q9Y3R5 2298 aa16.46■□□□□ 0.23
CCM2-206ENST00000474617 LINC00614P0C842 121 aa16.45■□□□□ 0.22
CCM2-206ENST00000474617 MED14OSP0DP75 135 aa16.45■□□□□ 0.22
CCM2-206ENST00000474617 TWIST1Q15672 202 aa16.45■□□□□ 0.22
CCM2-206ENST00000474617 RNASEKQ6P5S7 137 aaKnown RBP16.45■□□□□ 0.22
CCM2-206ENST00000474617 ORMDL3Q8N138 153 aa16.45■□□□□ 0.22
CCM2-206ENST00000474617 KLHDC1Q8N7A1 406 aa16.45■□□□□ 0.22
CCM2-206ENST00000474617 C4orf3Q8WVX3 66 aa16.45■□□□□ 0.22
CCM2-206ENST00000474617 TMEM160Q9NX00 188 aa16.45■□□□□ 0.22
CCM2-206ENST00000474617 CELSR1Q9NYQ6 3014 aa16.45■□□□□ 0.22
CCM2-206ENST00000474617 IGHV4-4A0A075B6R2 117 aa16.45■□□□□ 0.22
CCM2-206ENST00000474617 HOXD3P31249 432 aaPredicted RBP16.45■□□□□ 0.22
CCM2-206ENST00000474617 SMIM15Q7Z3B0 74 aa16.45■□□□□ 0.22
CCM2-206ENST00000474617 CSMD1Q96PZ7 3565 aa16.44■□□□□ 0.22
CCM2-206ENST00000474617 TRAV2A0A0B4J234 112 aa16.44■□□□□ 0.22
CCM2-206ENST00000474617 IGKV3D-20A0A0C4DH25 116 aa16.44■□□□□ 0.22
CCM2-206ENST00000474617 M0R2Z0 102 aa16.44■□□□□ 0.22
CCM2-206ENST00000474617 CDPF1Q6NVV7 123 aa16.44■□□□□ 0.22
CCM2-206ENST00000474617 C10orf99Q6UWK7 81 aa16.44■□□□□ 0.22
CCM2-206ENST00000474617 ZFAND2AQ8N6M9 145 aa16.44■□□□□ 0.22
CCM2-206ENST00000474617 PEMTQ9UBM1 199 aa16.44■□□□□ 0.22
CCM2-206ENST00000474617 IGHV4OR15-8A0A075B7B6 117 aa16.43■□□□□ 0.22
CCM2-206ENST00000474617 A0A087WW49 117 aa16.43■□□□□ 0.22
CCM2-206ENST00000474617 SNAI2O43623 268 aa16.43■□□□□ 0.22
CCM2-206ENST00000474617 NTF3P20783 257 aa16.43■□□□□ 0.22
CCM2-206ENST00000474617 TEX43Q6ZNM6 134 aa16.43■□□□□ 0.22
CCM2-206ENST00000474617 ZNF575Q86XF7 245 aa16.43■□□□□ 0.22
CCM2-206ENST00000474617 TENM4Q6N022 2769 aa16.43■□□□□ 0.22
CCM2-206ENST00000474617 ZANQ9Y493 2812 aa16.42■□□□□ 0.22
CCM2-206ENST00000474617 MS4A6AQ9H2W1 248 aa16.42■□□□□ 0.22
CCM2-206ENST00000474617 C2orf70A6NJV1 201 aa16.41■□□□□ 0.22
CCM2-206ENST00000474617 LINC01619G3V211 115 aa16.41■□□□□ 0.22
CCM2-206ENST00000474617 PRB4P10163 310 aaPredicted RBP16.41■□□□□ 0.22
CCM2-206ENST00000474617 SYNJ2BPP57105 145 aa16.41■□□□□ 0.22
CCM2-206ENST00000474617 DNAJC9-AS1A6NH13 148 aa16.4■□□□□ 0.22
CCM2-206ENST00000474617 K7EQG2 157 aa16.4■□□□□ 0.22
CCM2-206ENST00000474617 ZNF705DP0CH99 300 aaPredicted RBP16.4■□□□□ 0.22
CCM2-206ENST00000474617 ZNF705BP0CI00 300 aaPredicted RBP16.4■□□□□ 0.22
CCM2-206ENST00000474617 ITPR3Q14573 2671 aa16.4■□□□□ 0.22
CCM2-206ENST00000474617 FAM181BA6NEQ2 426 aa16.4■□□□□ 0.22
CCM2-206ENST00000474617 LEPP41159 167 aa16.4■□□□□ 0.22
CCM2-206ENST00000474617 KRTDAPP60985 99 aa16.4■□□□□ 0.22
CCM2-206ENST00000474617 PMCHL1Q16048 86 aa16.4■□□□□ 0.22
CCM2-206ENST00000474617 PRELID3AQ96N28 172 aa16.4■□□□□ 0.22
CCM2-206ENST00000474617 AP5S1Q9NUS5 200 aa16.4■□□□□ 0.22
CCM2-206ENST00000474617 DUSP14O95147 198 aaKnown RBP16.39■□□□□ 0.21
CCM2-206ENST00000474617 DPF1Q92782 380 aa16.39■□□□□ 0.21
CCM2-206ENST00000474617 CSMD2Q7Z408 3487 aa16.38■□□□□ 0.21
CCM2-206ENST00000474617 TEX15Q9BXT5 2789 aa16.38■□□□□ 0.21
CCM2-206ENST00000474617 LINC00587B1AMM8 73 aa16.38■□□□□ 0.21
CCM2-206ENST00000474617 KLLNB2CW77 178 aa16.38■□□□□ 0.21
CCM2-206ENST00000474617 KRTAP1-1Q07627 177 aa16.38■□□□□ 0.21
CCM2-206ENST00000474617 MRPL51Q4U2R6 128 aaKnown RBP16.38■□□□□ 0.21
CCM2-206ENST00000474617 FA2HQ7L5A8 372 aa16.38■□□□□ 0.21
CCM2-206ENST00000474617 ZNF664Q8N3J9 261 aa16.38■□□□□ 0.21
CCM2-206ENST00000474617 URB1-AS1Q96HZ7 61 aa16.38■□□□□ 0.21
CCM2-206ENST00000474617 C11orf21Q9P2W6 132 aa16.38■□□□□ 0.21
CCM2-206ENST00000474617 HSPB8Q9UJY1 196 aa16.38■□□□□ 0.21
CCM2-206ENST00000474617 D6R8Y8 96 aa16.37■□□□□ 0.21
CCM2-206ENST00000474617 BTF3P20290 206 aaKnown RBP16.37■□□□□ 0.21
CCM2-206ENST00000474617 DDTP30046 118 aa16.37■□□□□ 0.21
CCM2-206ENST00000474617 TSPOP30536 169 aa16.37■□□□□ 0.21
CCM2-206ENST00000474617 CKS2P33552 79 aa16.37■□□□□ 0.21
CCM2-206ENST00000474617 EBLN2Q6P2I7 272 aa16.37■□□□□ 0.21
CCM2-206ENST00000474617 Q6ZSV7 163 aa16.37■□□□□ 0.21
CCM2-206ENST00000474617 AMN1Q8IY45 258 aa16.37■□□□□ 0.21
CCM2-206ENST00000474617 FAM19A2Q8N3H0 131 aa16.37■□□□□ 0.21
CCM2-206ENST00000474617 PRSS3P2Q8NHM4 247 aa16.37■□□□□ 0.21
CCM2-206ENST00000474617 YAE1D1Q9NRH1 226 aa16.37■□□□□ 0.21
CCM2-206ENST00000474617 KIR2DL5BA0A0G2JN68 375 aa16.36■□□□□ 0.21
CCM2-206ENST00000474617 KIR2DL5BA0A0G2JPC4 375 aa16.36■□□□□ 0.21
CCM2-206ENST00000474617 RNASE1P07998 156 aaKnown RBP16.36■□□□□ 0.21
CCM2-206ENST00000474617 C3orf79P0CE67 100 aa16.36■□□□□ 0.21
CCM2-206ENST00000474617 ASIPP42127 132 aa16.36■□□□□ 0.21
CCM2-206ENST00000474617 KIR2DL5AQ8N109 375 aa16.36■□□□□ 0.21
CCM2-206ENST00000474617 IGHV1-24A0A0C4DH33 117 aa16.35■□□□□ 0.21
CCM2-206ENST00000474617 CRXO43186 299 aaPredicted RBP16.35■□□□□ 0.21
CCM2-206ENST00000474617 OR1N2Q8NGR9 330 aa16.35■□□□□ 0.21
CCM2-206ENST00000474617 VAMP8Q9BV40 100 aa16.35■□□□□ 0.21
CCM2-206ENST00000474617 C16orf95Q9H693 158 aa16.35■□□□□ 0.21
CCM2-206ENST00000474617 MXRA5Q9NR99 2828 aa16.35■□□□□ 0.21
CCM2-206ENST00000474617 IGKV3-7A0A075B6H7 116 aa16.35■□□□□ 0.21
CCM2-206ENST00000474617 C20orf202A1L168 122 aa16.35■□□□□ 0.21
CCM2-206ENST00000474617 LEPROTL1O95214 131 aa16.35■□□□□ 0.21
CCM2-206ENST00000474617 HIST2H2BCQ6DN03 193 aa16.35■□□□□ 0.21
CCM2-206ENST00000474617 C20orf144Q9BQM9 153 aa16.35■□□□□ 0.21
CCM2-206ENST00000474617 HELZ2Q9BYK8 2649 aaKnown RBP16.34■□□□□ 0.21
CCM2-206ENST00000474617 A0A0J9YX75 114 aa16.34■□□□□ 0.21
CCM2-206ENST00000474617 DEFA6Q01524 100 aa16.34■□□□□ 0.21
CCM2-206ENST00000474617 TCTEX1D4Q5JR98 221 aa16.34■□□□□ 0.21
CCM2-206ENST00000474617 PRR9Q5T870 116 aa16.34■□□□□ 0.21
CCM2-206ENST00000474617 SPANXN1Q5VSR9 72 aa16.34■□□□□ 0.21
CCM2-206ENST00000474617 FOXI2Q6ZQN5 318 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 540 ms