RNA–Protein interactions for RNA: ENST00000474546.1

CCDC93-208, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 452 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-208ENST00000474546 TEX22C9J3V5 150 aa6.31□□□□□ -1.4
CCDC93-208ENST00000474546 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.31□□□□□ -1.4
CCDC93-208ENST00000474546 H7C1H1 209 aa6.31□□□□□ -1.4
CCDC93-208ENST00000474546 CNIH1O95406 144 aa6.31□□□□□ -1.4
CCDC93-208ENST00000474546 AZU1P20160 251 aa6.31□□□□□ -1.4
CCDC93-208ENST00000474546 ZNF138P52744 262 aa6.31□□□□□ -1.4
CCDC93-208ENST00000474546 DLX6P56179 175 aa6.31□□□□□ -1.4
CCDC93-208ENST00000474546 SSBP2P81877 361 aaPredicted RBP6.31□□□□□ -1.4
CCDC93-208ENST00000474546 LAGE3Q14657 143 aa6.31□□□□□ -1.4
CCDC93-208ENST00000474546 HCP5Q6MZN7 132 aa6.31□□□□□ -1.4
CCDC93-208ENST00000474546 PRSS57Q6UWY2 283 aa6.31□□□□□ -1.4
CCDC93-208ENST00000474546 EXOC3-AS1Q8N2X6 119 aa6.31□□□□□ -1.4
CCDC93-208ENST00000474546 DEFB108BQ8NET1 73 aa6.31□□□□□ -1.4
CCDC93-208ENST00000474546 PRR25Q96S07 402 aa6.31□□□□□ -1.4
CCDC93-208ENST00000474546 JMJD8Q96S16 334 aa6.31□□□□□ -1.4
CCDC93-208ENST00000474546 FOXC2Q99958 501 aa6.31□□□□□ -1.4
CCDC93-208ENST00000474546 TPPP3Q9BW30 176 aa6.31□□□□□ -1.4
CCDC93-208ENST00000474546 TIMM8BQ9Y5J9 83 aaPredicted RBP6.31□□□□□ -1.4
CCDC93-208ENST00000474546 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.31□□□□□ -1.42e-9■■■■■ 35.4
CCDC93-208ENST00000474546 CNTRLQ7Z7A1 2325 aa6.3□□□□□ -1.4
CCDC93-208ENST00000474546 IGHV4-4A0A075B6R2 117 aa6.3□□□□□ -1.4
CCDC93-208ENST00000474546 A0A087WX48 190 aa6.3□□□□□ -1.4
CCDC93-208ENST00000474546 IGHV1-3A0A0C4DH29 117 aa6.3□□□□□ -1.4
CCDC93-208ENST00000474546 TEX48A0A1B0GUV7 120 aa6.3□□□□□ -1.4
CCDC93-208ENST00000474546 OR11H12B2RN74 326 aa6.3□□□□□ -1.4
CCDC93-208ENST00000474546 IGLL5B9A064 214 aa6.3□□□□□ -1.4
CCDC93-208ENST00000474546 BUB1B-PAK6H3BSN5 160 aa6.3□□□□□ -1.4
CCDC93-208ENST00000474546 OVOL3O00110 214 aa6.3□□□□□ -1.4
CCDC93-208ENST00000474546 TNFRSF13BO14836 293 aaPredicted RBP6.3□□□□□ -1.4
CCDC93-208ENST00000474546 IGKV1-17P01599 117 aa6.3□□□□□ -1.4
CCDC93-208ENST00000474546 IGLV1-47P01700 117 aa6.3□□□□□ -1.4
CCDC93-208ENST00000474546 IL4P05112 153 aa6.3□□□□□ -1.4
CCDC93-208ENST00000474546 COL8A2P25067 703 aa6.3□□□□□ -1.4
CCDC93-208ENST00000474546 LEPP41159 167 aa6.3□□□□□ -1.4
CCDC93-208ENST00000474546 KRTAP10-9P60411 292 aa6.3□□□□□ -1.4
CCDC93-208ENST00000474546 HERVK_113P61574 105 aa6.3□□□□□ -1.4
CCDC93-208ENST00000474546 KLRD1Q13241 179 aa6.3□□□□□ -1.4
CCDC93-208ENST00000474546 RRN3P1Q2M238 152 aa6.3□□□□□ -1.4
CCDC93-208ENST00000474546 Q5PR19 223 aa6.3□□□□□ -1.4
CCDC93-208ENST00000474546 IL17RELQ6ZVW7 336 aa6.3□□□□□ -1.4
CCDC93-208ENST00000474546 ZNF491Q8N8L2 437 aa6.3□□□□□ -1.4
CCDC93-208ENST00000474546 OR11H1Q8NG94 326 aa6.3□□□□□ -1.4
CCDC93-208ENST00000474546 OR11H2Q8NH07 326 aa6.3□□□□□ -1.4
CCDC93-208ENST00000474546 DLX4Q92988 240 aaPredicted RBP6.3□□□□□ -1.4
CCDC93-208ENST00000474546 RAB37Q96AX2 223 aa6.3□□□□□ -1.4
CCDC93-208ENST00000474546 DOCK7Q96N67 2140 aa6.3□□□□□ -1.4
CCDC93-208ENST00000474546 HIST1H4GQ99525 98 aa6.3□□□□□ -1.4
CCDC93-208ENST00000474546 C20orf78Q9BR46 151 aa6.3□□□□□ -1.4
CCDC93-208ENST00000474546 SPANXB1Q9NS25 103 aaPredicted RBP6.3□□□□□ -1.4
CCDC93-208ENST00000474546 SH3BGRL2Q9UJC5 107 aa6.3□□□□□ -1.4
CCDC93-208ENST00000474546 DNAJC13O75165 2243 aa6.3□□□□□ -1.4
CCDC93-208ENST00000474546 TRAV8-1A0A0A6YYK1 113 aa6.29□□□□□ -1.4
CCDC93-208ENST00000474546 LOC389332A0A1B0GUA5 103 aa6.29□□□□□ -1.4
CCDC93-208ENST00000474546 E7EUB6 86 aa6.29□□□□□ -1.4
CCDC93-208ENST00000474546 F8VRH5 84 aa6.29□□□□□ -1.4
CCDC93-208ENST00000474546 C16orf97H3BN30 126 aa6.29□□□□□ -1.4
CCDC93-208ENST00000474546 MRPS12O15235 138 aaKnown RBP6.29□□□□□ -1.4
CCDC93-208ENST00000474546 TNFRSF6BO95407 300 aa6.29□□□□□ -1.4
CCDC93-208ENST00000474546 NCR2O95944 276 aa6.29□□□□□ -1.4
CCDC93-208ENST00000474546 LOXP28300 417 aaPredicted RBP6.29□□□□□ -1.4
CCDC93-208ENST00000474546 C10orf55Q5SWW7 151 aa6.29□□□□□ -1.4
CCDC93-208ENST00000474546 VHLLQ6RSH7 139 aa6.29□□□□□ -1.4
CCDC93-208ENST00000474546 CLEC2AQ6UVW9 174 aa6.29□□□□□ -1.4
CCDC93-208ENST00000474546 NPBQ8NG41 125 aa6.29□□□□□ -1.4
CCDC93-208ENST00000474546 PHLDA1Q8WV24 401 aaPredicted RBP6.29□□□□□ -1.4
CCDC93-208ENST00000474546 C1QTNF4Q9BXJ3 329 aa6.29□□□□□ -1.4
CCDC93-208ENST00000474546 NHP2Q9NX24 153 aaKnown RBP6.29□□□□□ -1.4
CCDC93-208ENST00000474546 MRPL36Q9P0J6 103 aaKnown RBP6.29□□□□□ -1.4
CCDC93-208ENST00000474546 HHLA3Q9XRX5 114 aa6.29□□□□□ -1.4
CCDC93-208ENST00000474546 HILPDAQ9Y5L2 63 aa6.29□□□□□ -1.4
CCDC93-208ENST00000474546 K7EIM0 57 aa6.28□□□□□ -1.4
CCDC93-208ENST00000474546 M0R381 172 aa6.28□□□□□ -1.4
CCDC93-208ENST00000474546 NBR2O15453 112 aa6.28□□□□□ -1.4
CCDC93-208ENST00000474546 HOXA3O43365 443 aaPredicted RBP6.28□□□□□ -1.4
CCDC93-208ENST00000474546 NDUFA3O95167 84 aa6.28□□□□□ -1.4
CCDC93-208ENST00000474546 APOMO95445 188 aa6.28□□□□□ -1.4
CCDC93-208ENST00000474546 NPYP01303 97 aa6.28□□□□□ -1.4
CCDC93-208ENST00000474546 MED14OSP0DP75 135 aa6.28□□□□□ -1.4
CCDC93-208ENST00000474546 CCL3L1P16619 93 aa6.28□□□□□ -1.4
CCDC93-208ENST00000474546 CKS1BP61024 79 aa6.28□□□□□ -1.4
CCDC93-208ENST00000474546 C12orf74Q32Q52 190 aa6.28□□□□□ -1.4
CCDC93-208ENST00000474546 ZC2HC1BQ5TFG8 222 aa6.28□□□□□ -1.4
CCDC93-208ENST00000474546 ZNF418Q8TF45 676 aaPredicted RBP6.28□□□□□ -1.4
CCDC93-208ENST00000474546 SGK494Q96LW2 274 aa6.28□□□□□ -1.4
CCDC93-208ENST00000474546 DYNLRB1Q9NP97 96 aa6.28□□□□□ -1.4
CCDC93-208ENST00000474546 ZGRF1Q86YA3 2104 aa6.28□□□□□ -1.4
CCDC93-208ENST00000474546 POLEQ07864 2286 aa6.27□□□□□ -1.41
CCDC93-208ENST00000474546 IGHV1-69DA0A0B4J2H0 117 aa6.27□□□□□ -1.41
CCDC93-208ENST00000474546 TRBV7-9A0A0J9YWB2 115 aa6.27□□□□□ -1.41
CCDC93-208ENST00000474546 MYMXA0A1B0GTQ4 84 aa6.27□□□□□ -1.41
CCDC93-208ENST00000474546 B9A039 149 aa6.27□□□□□ -1.41
CCDC93-208ENST00000474546 SNAI2O43623 268 aa6.27□□□□□ -1.41
CCDC93-208ENST00000474546 ORM1P02763 201 aa6.27□□□□□ -1.41
CCDC93-208ENST00000474546 ASIPP42127 132 aa6.27□□□□□ -1.41
CCDC93-208ENST00000474546 FXYD2P54710 66 aa6.27□□□□□ -1.41
CCDC93-208ENST00000474546 RPL32P62910 135 aaKnown RBP6.27□□□□□ -1.41
CCDC93-208ENST00000474546 SMAGPQ0VAQ4 97 aa6.27□□□□□ -1.41
CCDC93-208ENST00000474546 ADIPOQQ15848 244 aa6.27□□□□□ -1.41
CCDC93-208ENST00000474546 MSMPQ1L6U9 139 aa6.27□□□□□ -1.41
CCDC93-208ENST00000474546 MRGPRG-AS1Q2M3A8 158 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms