RNA–Protein interactions for RNA: ENST00000474289.6

ECHDC1-214, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 2,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-214ENST00000474289 OR11H2Q8NH07 326 aa14.42□□□□□ -0.1
ECHDC1-214ENST00000474289 TRAV26-2A0A0B4J265 109 aa14.42□□□□□ -0.1
ECHDC1-214ENST00000474289 ADIPOQQ15848 244 aa14.42□□□□□ -0.1
ECHDC1-214ENST00000474289 BUB1B-PAK6H3BSN5 160 aa14.41□□□□□ -0.1
ECHDC1-214ENST00000474289 GATA3P23771 443 aa14.41□□□□□ -0.1
ECHDC1-214ENST00000474289 NRACQ8N912 160 aa14.41□□□□□ -0.1
ECHDC1-214ENST00000474289 SRSF8Q9BRL6 282 aaKnown RBP14.41□□□□□ -0.1
ECHDC1-214ENST00000474289 RAB1BQ9H0U4 201 aa14.41□□□□□ -0.1
ECHDC1-214ENST00000474289 F8VRH5 84 aa14.41□□□□□ -0.1
ECHDC1-214ENST00000474289 SFTA2Q6UW10 78 aa14.41□□□□□ -0.1
ECHDC1-214ENST00000474289 ASCL5Q7RTU5 278 aa14.41□□□□□ -0.1
ECHDC1-214ENST00000474289 PTH2Q96A98 100 aa14.41□□□□□ -0.1
ECHDC1-214ENST00000474289 RPL7P18124 248 aaKnown RBP14.4□□□□□ -0.1
ECHDC1-214ENST00000474289 RNF183Q96D59 192 aa14.4□□□□□ -0.1
ECHDC1-214ENST00000474289 LINC01549A6NIU2 74 aa14.4□□□□□ -0.1
ECHDC1-214ENST00000474289 LGALS1P09382 135 aaKnown RBP14.4□□□□□ -0.1
ECHDC1-214ENST00000474289 H7C1H1 209 aa14.39□□□□□ -0.11
ECHDC1-214ENST00000474289 PSMB2P49721 201 aa14.39□□□□□ -0.11
ECHDC1-214ENST00000474289 ERG28Q9UKR5 140 aa14.39□□□□□ -0.11
ECHDC1-214ENST00000474289 COLQQ9Y215 455 aaPredicted RBP14.39□□□□□ -0.11
ECHDC1-214ENST00000474289 SMAD5-AS1Q9Y6J3 95 aa14.39□□□□□ -0.11
ECHDC1-214ENST00000474289 ERCC8Q13216 396 aa14.39□□□□□ -0.11
ECHDC1-214ENST00000474289 CFHR4Q92496 578 aa14.39□□□□□ -0.11
ECHDC1-214ENST00000474289 CEP250Q9BV73 2442 aa14.38□□□□□ -0.11
ECHDC1-214ENST00000474289 MGAQ8IWI9 3026 aa14.38□□□□□ -0.11
ECHDC1-214ENST00000474289 F8W735 103 aaPredicted RBP14.38□□□□□ -0.11
ECHDC1-214ENST00000474289 ZFP2Q6ZN57 461 aa14.38□□□□□ -0.11
ECHDC1-214ENST00000474289 DYNAPQ8N1N2 210 aa14.38□□□□□ -0.11
ECHDC1-214ENST00000474289 CARD19Q96LW7 228 aa14.38□□□□□ -0.11
ECHDC1-214ENST00000474289 LOC107984156A0A0G2JMH3 177 aa14.37□□□□□ -0.11
ECHDC1-214ENST00000474289 LINC01548A6NM66 108 aa14.37□□□□□ -0.11
ECHDC1-214ENST00000474289 ZNF672Q499Z4 452 aaPredicted RBP14.37□□□□□ -0.11
ECHDC1-214ENST00000474289 IL17RELQ6ZVW7 336 aa14.37□□□□□ -0.11
ECHDC1-214ENST00000474289 ARL17AQ8IVW1 177 aa14.37□□□□□ -0.11
ECHDC1-214ENST00000474289 KAAG1Q9UBP8 84 aa14.37□□□□□ -0.11
ECHDC1-214ENST00000474289 TRAV12-1A0A0B4J245 112 aa14.37□□□□□ -0.11
ECHDC1-214ENST00000474289 COX7A1P24310 79 aa14.37□□□□□ -0.11
ECHDC1-214ENST00000474289 DMXL1Q9Y485 3027 aa14.37□□□□□ -0.11
ECHDC1-214ENST00000474289 IGKV3D-20A0A0C4DH25 116 aa14.36□□□□□ -0.11
ECHDC1-214ENST00000474289 C5orf64Q2M2E5 130 aa14.36□□□□□ -0.11
ECHDC1-214ENST00000474289 TMEM78Q5T7P6 136 aa14.36□□□□□ -0.11
ECHDC1-214ENST00000474289 UBE2D1P51668 147 aa14.36□□□□□ -0.11
ECHDC1-214ENST00000474289 PPDPFLQ8WWR9 84 aa14.36□□□□□ -0.11
ECHDC1-214ENST00000474289 UFC1Q9Y3C8 167 aa14.36□□□□□ -0.11
ECHDC1-214ENST00000474289 MAP1BP46821 2468 aaKnown RBP14.36□□□□□ -0.11
ECHDC1-214ENST00000474289 BDP1A6H8Y1 2624 aa14.35□□□□□ -0.11
ECHDC1-214ENST00000474289 PRAC2D3DTV9 90 aa14.35□□□□□ -0.11
ECHDC1-214ENST00000474289 MFAP4P55083 255 aa14.35□□□□□ -0.11
ECHDC1-214ENST00000474289 UBE2D3P61077 147 aa14.35□□□□□ -0.11
ECHDC1-214ENST00000474289 UBE2D2P62837 147 aa14.35□□□□□ -0.11
ECHDC1-214ENST00000474289 TEN1Q86WV5 123 aa14.35□□□□□ -0.11
ECHDC1-214ENST00000474289 FANCD2OSQ96PS1 177 aa14.35□□□□□ -0.11
ECHDC1-214ENST00000474289 C11orf21Q9P2W6 132 aa14.35□□□□□ -0.11
ECHDC1-214ENST00000474289 RAXQ9Y2V3 346 aa14.35□□□□□ -0.11
ECHDC1-214ENST00000474289 A6NJY4 79 aa14.35□□□□□ -0.11
ECHDC1-214ENST00000474289 IGHV3-23P01764 117 aa14.34□□□□□ -0.11
ECHDC1-214ENST00000474289 KLK15Q9H2R5 256 aa14.34□□□□□ -0.11
ECHDC1-214ENST00000474289 RNF5Q99942 180 aa14.34□□□□□ -0.11
ECHDC1-214ENST00000474289 PRADC1Q9BSG0 188 aa14.34□□□□□ -0.11
ECHDC1-214ENST00000474289 WNK2Q9Y3S1 2297 aa14.34□□□□□ -0.11
ECHDC1-214ENST00000474289 IGLV11-55A0A075B6I3 123 aa14.33□□□□□ -0.12
ECHDC1-214ENST00000474289 PRSS29PA6NIE9 313 aa14.33□□□□□ -0.12
ECHDC1-214ENST00000474289 TIMM23O14925 209 aa14.33□□□□□ -0.12
ECHDC1-214ENST00000474289 PLEKHB2Q96CS7 222 aa14.33□□□□□ -0.12
ECHDC1-214ENST00000474289 ANAPC13Q9BS18 74 aa14.33□□□□□ -0.12
ECHDC1-214ENST00000474289 SS18L2Q9UHA2 77 aa14.33□□□□□ -0.12
ECHDC1-214ENST00000474289 IGHV3OR16-8A0A075B7F1 116 aa14.32□□□□□ -0.12
ECHDC1-214ENST00000474289 IGHV7-4-1A0A0J9YVY3 117 aa14.32□□□□□ -0.12
ECHDC1-214ENST00000474289 ZNF815PA8K554 130 aa14.32□□□□□ -0.12
ECHDC1-214ENST00000474289 NEXN-AS1Q8NBZ9 246 aa14.32□□□□□ -0.12
ECHDC1-214ENST00000474289 SCGB1D4Q6XE38 83 aa14.32□□□□□ -0.12
ECHDC1-214ENST00000474289 C21orf62Q9NYP8 219 aa14.32□□□□□ -0.12
ECHDC1-214ENST00000474289 CD7P09564 240 aa14.31□□□□□ -0.12
ECHDC1-214ENST00000474289 BSPH1Q075Z2 132 aa14.31□□□□□ -0.12
ECHDC1-214ENST00000474289 SRSF9Q13242 221 aaKnown RBP eCLIP14.31□□□□□ -0.12
ECHDC1-214ENST00000474289 RNF182Q8N6D2 247 aa14.31□□□□□ -0.12
ECHDC1-214ENST00000474289 SCGB3A1Q96QR1 104 aa14.31□□□□□ -0.12
ECHDC1-214ENST00000474289 VKORC1Q9BQB6 163 aa14.31□□□□□ -0.12
ECHDC1-214ENST00000474289 SMIM2Q9BVW6 85 aa14.31□□□□□ -0.12
ECHDC1-214ENST00000474289 NBR2O15453 112 aa14.31□□□□□ -0.12
ECHDC1-214ENST00000474289 TCL1BO95988 128 aa14.31□□□□□ -0.12
ECHDC1-214ENST00000474289 IGFBPL1Q8WX77 278 aa14.31□□□□□ -0.12
ECHDC1-214ENST00000474289 RALYQ9UKM9 306 aaKnown RBP14.31□□□□□ -0.12
ECHDC1-214ENST00000474289 CUL9Q8IWT3 2517 aa14.3□□□□□ -0.12
ECHDC1-214ENST00000474289 LY6LH3BQJ8 138 aa14.3□□□□□ -0.12
ECHDC1-214ENST00000474289 OR11H6Q8NGC7 330 aa14.3□□□□□ -0.12
ECHDC1-214ENST00000474289 DEFB124Q8NES8 71 aa14.3□□□□□ -0.12
ECHDC1-214ENST00000474289 TOMM6Q96B49 74 aa14.3□□□□□ -0.12
ECHDC1-214ENST00000474289 KIR2DL4Q99706 377 aa14.3□□□□□ -0.12
ECHDC1-214ENST00000474289 PCNX1Q96RV3 2341 aa14.29□□□□□ -0.12
ECHDC1-214ENST00000474289 COX6B1P14854 86 aa14.29□□□□□ -0.12
ECHDC1-214ENST00000474289 IGHV3-35A0A0C4DH35 117 aa14.29□□□□□ -0.12
ECHDC1-214ENST00000474289 ZNF688P0C7X2 276 aa14.29□□□□□ -0.12
ECHDC1-214ENST00000474289 SLC25A16P16260 332 aa14.29□□□□□ -0.12
ECHDC1-214ENST00000474289 VCX2Q9H322 139 aa14.29□□□□□ -0.12
ECHDC1-214ENST00000474289 LYRM7Q5U5X0 104 aa14.28□□□□□ -0.12
ECHDC1-214ENST00000474289 SPANXN1Q5VSR9 72 aa14.28□□□□□ -0.12
ECHDC1-214ENST00000474289 RASL10AQ92737 203 aa14.28□□□□□ -0.12
ECHDC1-214ENST00000474289 RNASE6Q93091 150 aaKnown RBP14.28□□□□□ -0.12
ECHDC1-214ENST00000474289 POLEQ07864 2286 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms