RNA–Protein interactions for RNA: ENST00000474193.1

CCDC171-206, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 363 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-206ENST00000474193 ZNF767PQ75MW2 155 aa13.36□□□□□ -0.27
CCDC171-206ENST00000474193 C1orf158Q8N1D5 194 aa13.36□□□□□ -0.27
CCDC171-206ENST00000474193 TXNDC17Q9BRA2 123 aa13.36□□□□□ -0.27
CCDC171-206ENST00000474193 ZNF492Q9P255 531 aa13.36□□□□□ -0.27
CCDC171-206ENST00000474193 PLECQ15149 4684 aaKnown RBP13.36□□□□□ -0.27
CCDC171-206ENST00000474193 IGHV4-4A0A075B6R2 117 aa13.35□□□□□ -0.27
CCDC171-206ENST00000474193 FBLL1A6NHQ2 334 aaKnown RBP13.35□□□□□ -0.27
CCDC171-206ENST00000474193 NIPSNAP3BQ9BS92 247 aa13.35□□□□□ -0.27
CCDC171-206ENST00000474193 NDFIP1Q9BT67 221 aa13.35□□□□□ -0.27
CCDC171-206ENST00000474193 APLNQ9ULZ1 77 aa13.35□□□□□ -0.27
CCDC171-206ENST00000474193 ALMS1Q8TCU4 4167 aa13.35□□□□□ -0.27
CCDC171-206ENST00000474193 PEX7O00628 323 aa13.34□□□□□ -0.27
CCDC171-206ENST00000474193 GPX1P07203 203 aa13.34□□□□□ -0.27
CCDC171-206ENST00000474193 ATP5G3P48201 142 aa13.34□□□□□ -0.27
CCDC171-206ENST00000474193 FAM222AQ5U5X8 452 aa13.34□□□□□ -0.27
CCDC171-206ENST00000474193 TMEM256Q8N2U0 113 aa13.34□□□□□ -0.27
CCDC171-206ENST00000474193 NDUFAF3Q9BU61 184 aa13.34□□□□□ -0.27
CCDC171-206ENST00000474193 DKK2Q9UBU2 259 aa13.34□□□□□ -0.27
CCDC171-206ENST00000474193 TRAV12-2A0A075B6T6 113 aa13.33□□□□□ -0.28
CCDC171-206ENST00000474193 TRBV7-9A0A0J9YWB2 115 aa13.33□□□□□ -0.28
CCDC171-206ENST00000474193 J3KRW8 73 aa13.33□□□□□ -0.28
CCDC171-206ENST00000474193 NMBP08949 121 aa13.33□□□□□ -0.28
CCDC171-206ENST00000474193 RAB14P61106 215 aa13.33□□□□□ -0.28
CCDC171-206ENST00000474193 CCDC28AQ8IWP9 274 aa13.33□□□□□ -0.28
CCDC171-206ENST00000474193 TMEM75Q8N9X5 138 aa13.33□□□□□ -0.28
CCDC171-206ENST00000474193 LINC01587Q99440 93 aa13.33□□□□□ -0.28
CCDC171-206ENST00000474193 LENEPQ9Y5L5 61 aa13.33□□□□□ -0.28
CCDC171-206ENST00000474193 BCL2P10415 239 aa13.32□□□□□ -0.28
CCDC171-206ENST00000474193 DAD1P61803 113 aa13.32□□□□□ -0.28
CCDC171-206ENST00000474193 UBE2G1P62253 170 aa13.32□□□□□ -0.28
CCDC171-206ENST00000474193 FLI1Q01543 452 aaPredicted RBP13.32□□□□□ -0.28
CCDC171-206ENST00000474193 Q8TAT8 98 aa13.32□□□□□ -0.28
CCDC171-206ENST00000474193 VAX2Q9UIW0 290 aa13.32□□□□□ -0.28
CCDC171-206ENST00000474193 TRAV8-1A0A0A6YYK1 113 aa13.31□□□□□ -0.28
CCDC171-206ENST00000474193 AKR1C3P42330 323 aa13.31□□□□□ -0.28
CCDC171-206ENST00000474193 MEF2BQ02080 365 aaPredicted RBP13.31□□□□□ -0.28
CCDC171-206ENST00000474193 PRNTQ86SH4 94 aa13.31□□□□□ -0.28
CCDC171-206ENST00000474193 LYPD6BQ8NI32 183 aa13.31□□□□□ -0.28
CCDC171-206ENST00000474193 FAM210BQ96KR6 192 aa13.31□□□□□ -0.28
CCDC171-206ENST00000474193 SGK494Q96LW2 274 aa13.31□□□□□ -0.28
CCDC171-206ENST00000474193 C20orf144Q9BQM9 153 aa13.31□□□□□ -0.28
CCDC171-206ENST00000474193 PSG8Q9UQ74 426 aa13.31□□□□□ -0.28
CCDC171-206ENST00000474193 ZNF705GA8MUZ8 300 aaPredicted RBP13.3□□□□□ -0.28
CCDC171-206ENST00000474193 CRXO43186 299 aaPredicted RBP13.3□□□□□ -0.28
CCDC171-206ENST00000474193 PDE6DO43924 150 aa13.3□□□□□ -0.28
CCDC171-206ENST00000474193 S100A9P06702 114 aaKnown RBP13.3□□□□□ -0.28
CCDC171-206ENST00000474193 CRISP2P16562 243 aa13.3□□□□□ -0.28
CCDC171-206ENST00000474193 RNASE4P34096 147 aaKnown RBP13.3□□□□□ -0.28
CCDC171-206ENST00000474193 SAPCD1Q5SSQ6 148 aa13.3□□□□□ -0.28
CCDC171-206ENST00000474193 FMC1Q96HJ9 113 aa13.3□□□□□ -0.28
CCDC171-206ENST00000474193 FAM19A4Q96LR4 140 aa13.3□□□□□ -0.28
CCDC171-206ENST00000474193 TREM1Q9NP99 234 aa13.3□□□□□ -0.28
CCDC171-206ENST00000474193 TRAV34A0A0B4J273 112 aa13.29□□□□□ -0.28
CCDC171-206ENST00000474193 C7orf71A4D174 169 aa13.29□□□□□ -0.28
CCDC171-206ENST00000474193 RBFOX3A6NFN3 312 aa13.29□□□□□ -0.28
CCDC171-206ENST00000474193 LYRM9A8MSI8 78 aa13.29□□□□□ -0.28
CCDC171-206ENST00000474193 P0DMU3 169 aa13.29□□□□□ -0.28
CCDC171-206ENST00000474193 FAM231AP0DMU4 169 aa13.29□□□□□ -0.28
CCDC171-206ENST00000474193 FAM231CP0DMU5 169 aa13.29□□□□□ -0.28
CCDC171-206ENST00000474193 HTN1P15515 57 aa13.29□□□□□ -0.28
CCDC171-206ENST00000474193 HTN3P15516 51 aa13.29□□□□□ -0.28
CCDC171-206ENST00000474193 GFI1BQ5VTD9 330 aa13.29□□□□□ -0.28
CCDC171-206ENST00000474193 LINC00479Q96M42 142 aa13.29□□□□□ -0.28
CCDC171-206ENST00000474193 EIF5A2Q9GZV4 153 aaKnown RBP13.29□□□□□ -0.28
CCDC171-206ENST00000474193 TRAV12-3A0A0B4J271 114 aa13.28□□□□□ -0.28
CCDC171-206ENST00000474193 SCO2A0A1W2PP80 73 aa13.28□□□□□ -0.28
CCDC171-206ENST00000474193 KLLNB2CW77 178 aa13.28□□□□□ -0.28
CCDC171-206ENST00000474193 TAS2R60P59551 318 aa13.28□□□□□ -0.28
CCDC171-206ENST00000474193 PCNPQ8WW12 178 aaKnown RBP13.28□□□□□ -0.28
CCDC171-206ENST00000474193 H7BYZ3 331 aa13.27□□□□□ -0.29
CCDC171-206ENST00000474193 ZNF493Q6ZR52 646 aa13.27□□□□□ -0.29
CCDC171-206ENST00000474193 ZFAND2AQ8N6M9 145 aa13.27□□□□□ -0.29
CCDC171-206ENST00000474193 IGLV2-11P01706 119 aa13.26□□□□□ -0.29
CCDC171-206ENST00000474193 BTN1A1Q13410 526 aa13.26□□□□□ -0.29
CCDC171-206ENST00000474193 KIR3DS1Q14943 382 aa13.26□□□□□ -0.29
CCDC171-206ENST00000474193 TMEM183BQ1AE95 376 aa13.26□□□□□ -0.29
CCDC171-206ENST00000474193 C16orf74Q96GX8 76 aa13.26□□□□□ -0.29
CCDC171-206ENST00000474193 MED9Q9NWA0 146 aa13.26□□□□□ -0.29
CCDC171-206ENST00000474193 ZFP30Q9Y2G7 519 aa13.26□□□□□ -0.29
CCDC171-206ENST00000474193 KLF12Q9Y4X4 402 aa13.26□□□□□ -0.29
CCDC171-206ENST00000474193 SMUG1Q53HV7 270 aa13.25□□□□□ -0.29
CCDC171-206ENST00000474193 TOR2AQ5JU69 321 aa13.25□□□□□ -0.29
CCDC171-206ENST00000474193 FAM210AQ96ND0 272 aa13.25□□□□□ -0.29
CCDC171-206ENST00000474193 TRBV6-1A0A0K0K1D8 114 aa13.24□□□□□ -0.29
CCDC171-206ENST00000474193 DEFB130BP0DP73 79 aa13.24□□□□□ -0.29
CCDC171-206ENST00000474193 DEFB130AP0DP74 79 aa13.24□□□□□ -0.29
CCDC171-206ENST00000474193 ZNF506Q5JVG8 444 aa13.24□□□□□ -0.29
CCDC171-206ENST00000474193 Q86TA4 180 aa13.24□□□□□ -0.29
CCDC171-206ENST00000474193 UBE2DNLQ8IWF7 75 aa13.24□□□□□ -0.29
CCDC171-206ENST00000474193 C11orf52Q96A22 123 aa13.24□□□□□ -0.29
CCDC171-206ENST00000474193 PYGO2Q9BRQ0 406 aa13.24□□□□□ -0.29
CCDC171-206ENST00000474193 TIMM8BQ9Y5J9 83 aaPredicted RBP13.24□□□□□ -0.29
CCDC171-206ENST00000474193 HYDINQ4G0P3 5121 aa13.24□□□□□ -0.29
CCDC171-206ENST00000474193 TRAV21A0A0B4J279 112 aa13.23□□□□□ -0.29
CCDC171-206ENST00000474193 RGS13O14921 159 aa13.23□□□□□ -0.29
CCDC171-206ENST00000474193 POM121L12Q8N7R1 296 aa13.23□□□□□ -0.29
CCDC171-206ENST00000474193 TVP23CQ96ET8 276 aa13.23□□□□□ -0.29
CCDC171-206ENST00000474193 C8orf49Q96NF6 230 aa13.23□□□□□ -0.29
CCDC171-206ENST00000474193 ZNF324O75467 553 aaPredicted RBP13.22□□□□□ -0.29
CCDC171-206ENST00000474193 GCGP01275 180 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms