RNA–Protein interactions for RNA: ENST00000473684.5

TMEM39A-206, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 3,043 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-206ENST00000473684 FAM236DA0A1B0GTK5 79 aa3.95□□□□□ -1.78
TMEM39A-206ENST00000473684 PGPA6NDG6 321 aa3.95□□□□□ -1.78
TMEM39A-206ENST00000473684 F8VRH5 84 aa3.95□□□□□ -1.78
TMEM39A-206ENST00000473684 H7C1H1 209 aa3.95□□□□□ -1.78
TMEM39A-206ENST00000473684 COX7A2P2O60397 106 aa3.95□□□□□ -1.78
TMEM39A-206ENST00000473684 TCRAP04437 139 aa3.95□□□□□ -1.78
TMEM39A-206ENST00000473684 FAM236CP0DP71 79 aa3.95□□□□□ -1.78
TMEM39A-206ENST00000473684 CRIP2P52943 208 aaPredicted RBP3.95□□□□□ -1.78
TMEM39A-206ENST00000473684 FXYD7P58549 80 aa3.95□□□□□ -1.78
TMEM39A-206ENST00000473684 HERVK_113P61574 105 aa3.95□□□□□ -1.78
TMEM39A-206ENST00000473684 C10orf113Q5VZT2 155 aa3.95□□□□□ -1.78
TMEM39A-206ENST00000473684 KRTAP4-8Q9BYQ9 185 aa3.95□□□□□ -1.78
TMEM39A-206ENST00000473684 C15orf61A6NNL5 157 aa3.94□□□□□ -1.78
TMEM39A-206ENST00000473684 ZNF815PA8K554 130 aa3.94□□□□□ -1.78
TMEM39A-206ENST00000473684 EPM2AB3EWF7 344 aa3.94□□□□□ -1.78
TMEM39A-206ENST00000473684 PYYP10082 97 aa3.94□□□□□ -1.78
TMEM39A-206ENST00000473684 PRDX2P32119 198 aa3.94□□□□□ -1.78
TMEM39A-206ENST00000473684 COL27A1Q8IZC6 1860 aaPredicted RBP3.94□□□□□ -1.78
TMEM39A-206ENST00000473684 SERP2Q8N6R1 65 aa3.94□□□□□ -1.78
TMEM39A-206ENST00000473684 NOTCH4Q99466 2003 aa3.94□□□□□ -1.78
TMEM39A-206ENST00000473684 EML6Q6ZMW3 1958 aa3.94□□□□□ -1.78
TMEM39A-206ENST00000473684 MUC22E2RYF6 1773 aaPredicted RBP3.94□□□□□ -1.78
TMEM39A-206ENST00000473684 A0A0B4J2C4 111 aa3.94□□□□□ -1.78
TMEM39A-206ENST00000473684 NDUFC2O95298 119 aa3.94□□□□□ -1.78
TMEM39A-206ENST00000473684 SDIM1Q6ZPB5 146 aa3.94□□□□□ -1.78
TMEM39A-206ENST00000473684 Q6ZT83 130 aa3.94□□□□□ -1.78
TMEM39A-206ENST00000473684 Q8N1X5 172 aa3.94□□□□□ -1.78
TMEM39A-206ENST00000473684 UPK3BQ9BT76 320 aa3.94□□□□□ -1.78
TMEM39A-206ENST00000473684 DPH3P1Q9H4G8 78 aa3.94□□□□□ -1.78
TMEM39A-206ENST00000473684 KMT2BQ9UMN6 2715 aaPredicted RBP3.93□□□□□ -1.78
TMEM39A-206ENST00000473684 TRAV12-2A0A075B6T6 113 aa3.93□□□□□ -1.78
TMEM39A-206ENST00000473684 IGKV1OR2-108A0A075B7D4 117 aa3.93□□□□□ -1.78
TMEM39A-206ENST00000473684 A0A0U1RRA0 63 aa3.93□□□□□ -1.78
TMEM39A-206ENST00000473684 IGHV3-33P01772 117 aa3.93□□□□□ -1.78
TMEM39A-206ENST00000473684 CFHR1Q03591 330 aa3.93□□□□□ -1.78
TMEM39A-206ENST00000473684 APRG1Q8IVJ8 170 aa3.93□□□□□ -1.78
TMEM39A-206ENST00000473684 SAP25Q8TEE9 199 aa3.93□□□□□ -1.78
TMEM39A-206ENST00000473684 OTORQ9NRC9 128 aa3.93□□□□□ -1.78
TMEM39A-206ENST00000473684 PROP1O75360 226 aa3.93□□□□□ -1.78
TMEM39A-206ENST00000473684 NDUFA3O95167 84 aa3.93□□□□□ -1.78
TMEM39A-206ENST00000473684 ZNF883P0CG24 379 aa3.93□□□□□ -1.78
TMEM39A-206ENST00000473684 PCBD1P61457 104 aa3.93□□□□□ -1.78
TMEM39A-206ENST00000473684 NPC2P61916 151 aa3.93□□□□□ -1.78
TMEM39A-206ENST00000473684 MORN5Q5VZ52 161 aa3.93□□□□□ -1.78
TMEM39A-206ENST00000473684 RPUSD1Q9UJJ7 312 aaKnown RBP3.93□□□□□ -1.78
TMEM39A-206ENST00000473684 CEP192Q8TEP8 1941 aa3.93□□□□□ -1.78
TMEM39A-206ENST00000473684 TET1Q8NFU7 2136 aa3.92□□□□□ -1.78
TMEM39A-206ENST00000473684 TRBV30A0A0K0K1B3 111 aa3.92□□□□□ -1.78
TMEM39A-206ENST00000473684 TMEM30CPA0ZSE6 113 aa3.92□□□□□ -1.78
TMEM39A-206ENST00000473684 TMEM178BH3BS89 294 aa3.92□□□□□ -1.78
TMEM39A-206ENST00000473684 IGHV3-30P01768 117 aa3.92□□□□□ -1.78
TMEM39A-206ENST00000473684 IGHV3-30-5P0DP03 117 aa3.92□□□□□ -1.78
TMEM39A-206ENST00000473684 COX6B1P14854 86 aa3.92□□□□□ -1.78
TMEM39A-206ENST00000473684 RPL18AQ02543 176 aaKnown RBP3.92□□□□□ -1.78
TMEM39A-206ENST00000473684 C2orf83Q53S99 150 aa3.92□□□□□ -1.78
TMEM39A-206ENST00000473684 Q8IYB0 196 aa3.92□□□□□ -1.78
TMEM39A-206ENST00000473684 SCNM1Q9BWG6 230 aa3.92□□□□□ -1.78
TMEM39A-206ENST00000473684 TMEM14BQ9NUH8 114 aa3.92□□□□□ -1.78
TMEM39A-206ENST00000473684 SERP1Q9Y6X1 66 aa3.92□□□□□ -1.78
TMEM39A-206ENST00000473684 A0A0J9YY99 117 aa3.92□□□□□ -1.78
TMEM39A-206ENST00000473684 EPOPA6NHQ4 379 aa3.92□□□□□ -1.78
TMEM39A-206ENST00000473684 EFNA2O43921 213 aa3.92□□□□□ -1.78
TMEM39A-206ENST00000473684 FSTL3O95633 263 aa3.92□□□□□ -1.78
TMEM39A-206ENST00000473684 LINC00311Q8N616 119 aa3.92□□□□□ -1.78
TMEM39A-206ENST00000473684 NEXN-AS1Q8NBZ9 246 aa3.92□□□□□ -1.78
TMEM39A-206ENST00000473684 FGF23Q9GZV9 251 aaPredicted RBP3.92□□□□□ -1.78
TMEM39A-206ENST00000473684 ARHGEF17Q96PE2 2063 aaPredicted RBP3.92□□□□□ -1.78
TMEM39A-206ENST00000473684 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.92□□□□□ -1.78
TMEM39A-206ENST00000473684 FCGR3BO75015 233 aa3.92□□□□□ -1.78
TMEM39A-206ENST00000473684 SLC25A29Q8N8R3 303 aa3.92□□□□□ -1.78
TMEM39A-206ENST00000473684 MDS2Q8NDY4 140 aa3.92□□□□□ -1.78
TMEM39A-206ENST00000473684 DYNLRB1Q9NP97 96 aa3.92□□□□□ -1.78
TMEM39A-206ENST00000473684 USF3Q68DE3 2245 aa3.91□□□□□ -1.78
TMEM39A-206ENST00000473684 IGKV3D-11A0A0A0MRZ8 115 aa3.91□□□□□ -1.78
TMEM39A-206ENST00000473684 IGLV3-32A0A0A0MS00 114 aa3.91□□□□□ -1.78
TMEM39A-206ENST00000473684 C12orf77C9JDV5 145 aa3.91□□□□□ -1.78
TMEM39A-206ENST00000473684 H7C423 109 aa3.91□□□□□ -1.78
TMEM39A-206ENST00000473684 UPK2O00526 184 aa3.91□□□□□ -1.78
TMEM39A-206ENST00000473684 CCL16O15467 120 aa3.91□□□□□ -1.78
TMEM39A-206ENST00000473684 ZNF22P17026 224 aaPredicted RBP3.91□□□□□ -1.78
TMEM39A-206ENST00000473684 ZNF32P17041 273 aa3.91□□□□□ -1.78
TMEM39A-206ENST00000473684 FAM27E3Q08E93 113 aa3.91□□□□□ -1.78
TMEM39A-206ENST00000473684 FOXF2Q12947 444 aa3.91□□□□□ -1.78
TMEM39A-206ENST00000473684 LYZL1Q6UWQ5 148 aa3.91□□□□□ -1.78
TMEM39A-206ENST00000473684 TMEM75Q8N9X5 138 aa3.91□□□□□ -1.78
TMEM39A-206ENST00000473684 UBALD1Q8TB05 177 aa3.91□□□□□ -1.78
TMEM39A-206ENST00000473684 TMEM263Q8WUH6 116 aaKnown RBP3.91□□□□□ -1.78
TMEM39A-206ENST00000473684 Q9H3A6 140 aa3.91□□□□□ -1.78
TMEM39A-206ENST00000473684 MYO7AQ13402 2215 aa3.91□□□□□ -1.78
TMEM39A-206ENST00000473684 SMIM26A0A096LP01 95 aa3.91□□□□□ -1.78
TMEM39A-206ENST00000473684 TRAV41A0A0B4J266 112 aa3.91□□□□□ -1.78
TMEM39A-206ENST00000473684 J3QT63 122 aa3.91□□□□□ -1.78
TMEM39A-206ENST00000473684 NGFP01138 241 aa3.91□□□□□ -1.78
TMEM39A-206ENST00000473684 IGLV2-11P01706 119 aa3.91□□□□□ -1.78
TMEM39A-206ENST00000473684 IGHV3-13P01766 116 aa3.91□□□□□ -1.78
TMEM39A-206ENST00000473684 SSR4P51571 173 aa3.91□□□□□ -1.78
TMEM39A-206ENST00000473684 PROK1P58294 105 aa3.91□□□□□ -1.78
TMEM39A-206ENST00000473684 LAGE3Q14657 143 aa3.91□□□□□ -1.78
TMEM39A-206ENST00000473684 VMA21Q3ZAQ7 101 aa3.91□□□□□ -1.78
TMEM39A-206ENST00000473684 C10orf105Q8TEF2 133 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms