RNA–Protein interactions for RNA: ENST00000473417.5

SNX4-204, Transcript of sorting nexin 4, humanhuman

TSL 3

Gene SNX4, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-204ENST00000473417 A0A1W2PRE2 83 aa12.87□□□□□ -0.35
SNX4-204ENST00000473417 SPART-AS1P0CW21 52 aa12.87□□□□□ -0.35
SNX4-204ENST00000473417 PRR9Q5T870 116 aa12.87□□□□□ -0.35
SNX4-204ENST00000473417 FAM222AQ5U5X8 452 aa12.87□□□□□ -0.35
SNX4-204ENST00000473417 SFT2D1Q8WV19 159 aa12.87□□□□□ -0.35
SNX4-204ENST00000473417 SGK494Q96LW2 274 aa12.87□□□□□ -0.35
SNX4-204ENST00000473417 DEFB131BA0A096LNP1 70 aa12.86□□□□□ -0.35
SNX4-204ENST00000473417 TRAV8-1A0A0A6YYK1 113 aa12.86□□□□□ -0.35
SNX4-204ENST00000473417 TCRAP04437 139 aa12.86□□□□□ -0.35
SNX4-204ENST00000473417 NMBP08949 121 aa12.86□□□□□ -0.35
SNX4-204ENST00000473417 DPPA3Q6W0C5 159 aa12.86□□□□□ -0.35
SNX4-204ENST00000473417 SLC51BQ86UW2 128 aa12.86□□□□□ -0.35
SNX4-204ENST00000473417 MBD3L1Q8WWY6 194 aa12.86□□□□□ -0.35
SNX4-204ENST00000473417 DKK2Q9UBU2 259 aa12.86□□□□□ -0.35
SNX4-204ENST00000473417 EPDR1Q9UM22 224 aa12.86□□□□□ -0.35
SNX4-204ENST00000473417 TRBV7-9A0A0J9YWB2 115 aa12.85□□□□□ -0.35
SNX4-204ENST00000473417 EIF5AL1Q6IS14 154 aaKnown RBP12.85□□□□□ -0.35
SNX4-204ENST00000473417 Q6ZQT7 251 aa12.85□□□□□ -0.35
SNX4-204ENST00000473417 FAM74A7A6NL05 159 aa12.84□□□□□ -0.35
SNX4-204ENST00000473417 ZNF324O75467 553 aaPredicted RBP12.84□□□□□ -0.35
SNX4-204ENST00000473417 IFNA7P01567 189 aa12.84□□□□□ -0.35
SNX4-204ENST00000473417 H2AFB1P0C5Y9 115 aa12.84□□□□□ -0.35
SNX4-204ENST00000473417 NKX2-5P52952 324 aaPredicted RBP12.84□□□□□ -0.35
SNX4-204ENST00000473417 CCDC28AQ8IWP9 274 aa12.84□□□□□ -0.35
SNX4-204ENST00000473417 C16orf74Q96GX8 76 aa12.84□□□□□ -0.35
SNX4-204ENST00000473417 PYGO2Q9BRQ0 406 aa12.84□□□□□ -0.35
SNX4-204ENST00000473417 SERTM2A0A1B0GWG4 89 aa12.83□□□□□ -0.36
SNX4-204ENST00000473417 PLAC8L1A1L4L8 177 aa12.83□□□□□ -0.36
SNX4-204ENST00000473417 K7EQM0 130 aa12.83□□□□□ -0.36
SNX4-204ENST00000473417 LENEPQ9Y5L5 61 aa12.83□□□□□ -0.36
SNX4-204ENST00000473417 RAB5CP51148 216 aa12.82□□□□□ -0.36
SNX4-204ENST00000473417 CST9LP1Q5W188 147 aa12.82□□□□□ -0.36
SNX4-204ENST00000473417 ZNF493Q6ZR52 646 aa12.82□□□□□ -0.36
SNX4-204ENST00000473417 CYB561D1Q8N8Q1 229 aa12.82□□□□□ -0.36
SNX4-204ENST00000473417 RNASE8Q8TDE3 154 aaKnown RBP12.82□□□□□ -0.36
SNX4-204ENST00000473417 TMEM263Q8WUH6 116 aaKnown RBP12.82□□□□□ -0.36
SNX4-204ENST00000473417 TVP23CQ96ET8 276 aa12.82□□□□□ -0.36
SNX4-204ENST00000473417 ATG101Q9BSB4 218 aa12.82□□□□□ -0.36
SNX4-204ENST00000473417 NKX6-2Q9C056 277 aaPredicted RBP12.82□□□□□ -0.36
SNX4-204ENST00000473417 TEX48A0A1B0GUV7 120 aa12.81□□□□□ -0.36
SNX4-204ENST00000473417 RGS13O14921 159 aa12.81□□□□□ -0.36
SNX4-204ENST00000473417 SULT1A2P50226 295 aa12.81□□□□□ -0.36
SNX4-204ENST00000473417 LINC00479Q96M42 142 aa12.81□□□□□ -0.36
SNX4-204ENST00000473417 TREM1Q9NP99 234 aa12.81□□□□□ -0.36
SNX4-204ENST00000473417 PSG8Q9UQ74 426 aa12.81□□□□□ -0.36
SNX4-204ENST00000473417 CBY3A6NI87 242 aa12.8□□□□□ -0.36
SNX4-204ENST00000473417 F6UZH7 168 aa12.8□□□□□ -0.36
SNX4-204ENST00000473417 PAGE4O60829 102 aa12.8□□□□□ -0.36
SNX4-204ENST00000473417 IGLV2-11P01706 119 aa12.8□□□□□ -0.36
SNX4-204ENST00000473417 FLI1Q01543 452 aaPredicted RBP12.8□□□□□ -0.36
SNX4-204ENST00000473417 PRNTQ86SH4 94 aa12.8□□□□□ -0.36
SNX4-204ENST00000473417 NDUFAF3Q9BU61 184 aa12.8□□□□□ -0.36
SNX4-204ENST00000473417 NOP10Q9NPE3 64 aaKnown RBP12.8□□□□□ -0.36
SNX4-204ENST00000473417 TIMM8BQ9Y5J9 83 aaPredicted RBP12.8□□□□□ -0.36
SNX4-204ENST00000473417 IGHV1OR15-1A0A075B7D0 117 aa12.79□□□□□ -0.36
SNX4-204ENST00000473417 TRAV34A0A0B4J273 112 aa12.79□□□□□ -0.36
SNX4-204ENST00000473417 LYRM9A8MSI8 78 aa12.79□□□□□ -0.36
SNX4-204ENST00000473417 PEX7O00628 323 aa12.79□□□□□ -0.36
SNX4-204ENST00000473417 DEFB130BP0DP73 79 aa12.79□□□□□ -0.36
SNX4-204ENST00000473417 DEFB130AP0DP74 79 aa12.79□□□□□ -0.36
SNX4-204ENST00000473417 ATP5G3P48201 142 aa12.79□□□□□ -0.36
SNX4-204ENST00000473417 DAD1P61803 113 aa12.79□□□□□ -0.36
SNX4-204ENST00000473417 MUC21Q5SSG8 566 aa12.79□□□□□ -0.36
SNX4-204ENST00000473417 EIF4E3Q8N5X7 224 aaKnown RBP12.79□□□□□ -0.36
SNX4-204ENST00000473417 TMEM75Q8N9X5 138 aa12.79□□□□□ -0.36
SNX4-204ENST00000473417 LINC00467Q9BRT7 94 aa12.79□□□□□ -0.36
SNX4-204ENST00000473417 NDFIP1Q9BT67 221 aa12.79□□□□□ -0.36
SNX4-204ENST00000473417 BOLA1Q9Y3E2 137 aa12.79□□□□□ -0.36
SNX4-204ENST00000473417 DNAH2Q9P225 4427 aa12.79□□□□□ -0.36
SNX4-204ENST00000473417 CCL20P78556 96 aa12.78□□□□□ -0.36
SNX4-204ENST00000473417 Q6AWC8 147 aa12.78□□□□□ -0.36
SNX4-204ENST00000473417 HIST1H2BAQ96A08 127 aa12.78□□□□□ -0.36
SNX4-204ENST00000473417 C8orf49Q96NF6 230 aa12.78□□□□□ -0.36
SNX4-204ENST00000473417 TP53TG3Q9ULZ0 132 aa12.78□□□□□ -0.36
SNX4-204ENST00000473417 SNURFLB1AK76 121 aa12.77□□□□□ -0.37
SNX4-204ENST00000473417 P0DMU3 169 aa12.77□□□□□ -0.37
SNX4-204ENST00000473417 FAM231AP0DMU4 169 aa12.77□□□□□ -0.37
SNX4-204ENST00000473417 FAM231CP0DMU5 169 aa12.77□□□□□ -0.37
SNX4-204ENST00000473417 HTN3P15516 51 aa12.77□□□□□ -0.37
SNX4-204ENST00000473417 ANXA2RQ3ZCQ2 193 aa12.77□□□□□ -0.37
SNX4-204ENST00000473417 GSN-AS1Q9NRJ2 163 aa12.77□□□□□ -0.37
SNX4-204ENST00000473417 ARL2-SNX15V9GYD0 113 aa12.77□□□□□ -0.37
SNX4-204ENST00000473417 FBLL1A6NHQ2 334 aaKnown RBP12.76□□□□□ -0.37
SNX4-204ENST00000473417 PPT1P50897 306 aa12.76□□□□□ -0.37
SNX4-204ENST00000473417 C11orf72Q8NBR9 251 aa12.76□□□□□ -0.37
SNX4-204ENST00000473417 ZNF680Q8NEM1 530 aa12.76□□□□□ -0.37
SNX4-204ENST00000473417 FAM210BQ96KR6 192 aa12.76□□□□□ -0.37
SNX4-204ENST00000473417 GNG13Q9P2W3 67 aa12.76□□□□□ -0.37
SNX4-204ENST00000473417 NAGKQ9UJ70 344 aa12.76□□□□□ -0.37
SNX4-204ENST00000473417 NACAE9PAV3 2078 aa12.76□□□□□ -0.37
SNX4-204ENST00000473417 FAT2Q9NYQ8 4349 aa12.76□□□□□ -0.37
SNX4-204ENST00000473417 DNAH17Q9UFH2 4485 aa12.76□□□□□ -0.37
SNX4-204ENST00000473417 TRAV1-1A0A0B4J248 108 aa12.75□□□□□ -0.37
SNX4-204ENST00000473417 TRAV21A0A0B4J279 112 aa12.75□□□□□ -0.37
SNX4-204ENST00000473417 TEX46H3BTG2 121 aa12.75□□□□□ -0.37
SNX4-204ENST00000473417 SAPCD1Q5SSQ6 148 aa12.75□□□□□ -0.37
SNX4-204ENST00000473417 FAM159AQ6UWV7 190 aa12.75□□□□□ -0.37
SNX4-204ENST00000473417 ALKAL2Q6UX46 152 aa12.75□□□□□ -0.37
SNX4-204ENST00000473417 POM121L12Q8N7R1 296 aa12.75□□□□□ -0.37
SNX4-204ENST00000473417 GCGP01275 180 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms