RNA–Protein interactions for RNA: ENST00000473371.1

NHLRC3-204, Transcript of NHL repeat containing 3, humanhuman

TSL 2

Gene NHLRC3, Length 3,237 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-204ENST00000473371 C11orf21Q9P2W6 132 aa10.99□□□□□ -0.65
NHLRC3-204ENST00000473371 ABCA4P78363 2273 aa10.99□□□□□ -0.65
NHLRC3-204ENST00000473371 TRAV26-2A0A0B4J265 109 aa10.98□□□□□ -0.65
NHLRC3-204ENST00000473371 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.98□□□□□ -0.65
NHLRC3-204ENST00000473371 MAPKAPK5-AS1Q8N8E1 139 aa10.98□□□□□ -0.65
NHLRC3-204ENST00000473371 AGPAT4-IT1Q9H0P7 198 aa10.98□□□□□ -0.65
NHLRC3-204ENST00000473371 IGHV3OR16-13A0A075B7E8 117 aa10.98□□□□□ -0.65
NHLRC3-204ENST00000473371 IGHV3-74A0A0B4J1X5 117 aa10.98□□□□□ -0.65
NHLRC3-204ENST00000473371 CLEC2AQ6UVW9 174 aa10.98□□□□□ -0.65
NHLRC3-204ENST00000473371 IGHV7-81A0A0B4J1V7 117 aa10.97□□□□□ -0.65
NHLRC3-204ENST00000473371 RBAKDNA6NC62 111 aa10.97□□□□□ -0.65
NHLRC3-204ENST00000473371 FAM90A27PA6NNH2 459 aa10.97□□□□□ -0.65
NHLRC3-204ENST00000473371 BUB3O43684 328 aa10.97□□□□□ -0.65
NHLRC3-204ENST00000473371 HLA-DRB4P13762 266 aa10.97□□□□□ -0.65
NHLRC3-204ENST00000473371 SLC50A1Q9BRV3 221 aa10.97□□□□□ -0.65
NHLRC3-204ENST00000473371 HLA-DRB4X5D2U9 266 aa10.97□□□□□ -0.65
NHLRC3-204ENST00000473371 AKAP13Q12802 2813 aa10.97□□□□□ -0.65
NHLRC3-204ENST00000473371 TTC28Q96AY4 2481 aa10.97□□□□□ -0.65
NHLRC3-204ENST00000473371 J3KRW8 73 aa10.97□□□□□ -0.65
NHLRC3-204ENST00000473371 RAB9AP51151 201 aa10.97□□□□□ -0.65
NHLRC3-204ENST00000473371 SRSF1Q07955 248 aaKnown RBP eCLIP10.97□□□□□ -0.65
NHLRC3-204ENST00000473371 C15orf32Q32M92 178 aa10.97□□□□□ -0.65
NHLRC3-204ENST00000473371 Q8N6K4 173 aa10.97□□□□□ -0.65
NHLRC3-204ENST00000473371 IGLL5B9A064 214 aa10.97□□□□□ -0.65
NHLRC3-204ENST00000473371 GOSR1O95249 250 aa10.97□□□□□ -0.65
NHLRC3-204ENST00000473371 CLEC3BP05452 202 aa10.97□□□□□ -0.65
NHLRC3-204ENST00000473371 ECSCRQ19T08 205 aa10.97□□□□□ -0.65
NHLRC3-204ENST00000473371 TMEM78Q5T7P6 136 aa10.97□□□□□ -0.65
NHLRC3-204ENST00000473371 E9PLD3 99 aa10.96□□□□□ -0.65
NHLRC3-204ENST00000473371 NRACQ8N912 160 aa10.96□□□□□ -0.65
NHLRC3-204ENST00000473371 ZNF479Q96JC4 524 aa10.96□□□□□ -0.65
NHLRC3-204ENST00000473371 ZFAND3Q9H8U3 227 aa10.96□□□□□ -0.65
NHLRC3-204ENST00000473371 A0A087WX48 190 aa10.96□□□□□ -0.66
NHLRC3-204ENST00000473371 SPANXN1Q5VSR9 72 aa10.96□□□□□ -0.66
NHLRC3-204ENST00000473371 SAMD13Q5VXD3 122 aa10.96□□□□□ -0.66
NHLRC3-204ENST00000473371 ZNF502Q8TBZ5 544 aa10.96□□□□□ -0.66
NHLRC3-204ENST00000473371 GRNP28799 593 aaKnown RBP10.96□□□□□ -0.66
NHLRC3-204ENST00000473371 EFNA4P52798 201 aa10.96□□□□□ -0.66
NHLRC3-204ENST00000473371 HIST1H4GQ99525 98 aa10.96□□□□□ -0.66
NHLRC3-204ENST00000473371 IGHV3-49A0A0A0MS15 119 aa10.95□□□□□ -0.66
NHLRC3-204ENST00000473371 VKORC1Q9BQB6 163 aa10.95□□□□□ -0.66
NHLRC3-204ENST00000473371 TAL2Q16559 108 aa10.95□□□□□ -0.66
NHLRC3-204ENST00000473371 C12orf74Q32Q52 190 aa10.95□□□□□ -0.66
NHLRC3-204ENST00000473371 FOXI2Q6ZQN5 318 aa10.95□□□□□ -0.66
NHLRC3-204ENST00000473371 IGHV7-4-1A0A0J9YVY3 117 aa10.94□□□□□ -0.66
NHLRC3-204ENST00000473371 FAM110DQ8TAY7 271 aaPredicted RBP10.94□□□□□ -0.66
NHLRC3-204ENST00000473371 OOSP1A8MZH6 123 aa10.94□□□□□ -0.66
NHLRC3-204ENST00000473371 EBI3Q14213 229 aa10.94□□□□□ -0.66
NHLRC3-204ENST00000473371 WFDC2Q14508 124 aa10.94□□□□□ -0.66
NHLRC3-204ENST00000473371 ATMQ13315 3056 aa10.94□□□□□ -0.66
NHLRC3-204ENST00000473371 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.94□□□□□ -0.66
NHLRC3-204ENST00000473371 ZNF207O43670 478 aaKnown RBP10.94□□□□□ -0.66
NHLRC3-204ENST00000473371 PLNP26678 52 aa10.94□□□□□ -0.66
NHLRC3-204ENST00000473371 CLEC19AQ6UXS0 136 aa10.94□□□□□ -0.66
NHLRC3-204ENST00000473371 Q8N9W7 124 aa10.94□□□□□ -0.66
NHLRC3-204ENST00000473371 AGRNO00468 2067 aa10.93□□□□□ -0.66
NHLRC3-204ENST00000473371 ANKHD1Q8IWZ3 2542 aaKnown RBP10.93□□□□□ -0.66
NHLRC3-204ENST00000473371 F8W1H4 67 aa10.93□□□□□ -0.66
NHLRC3-204ENST00000473371 Q6ZQT7 251 aa10.93□□□□□ -0.66
NHLRC3-204ENST00000473371 GTSF1LQ9H1H1 148 aa10.93□□□□□ -0.66
NHLRC3-204ENST00000473371 TRAV8-2A0A0B4J237 113 aa10.92□□□□□ -0.66
NHLRC3-204ENST00000473371 MINOS1Q5TGZ0 78 aa10.92□□□□□ -0.66
NHLRC3-204ENST00000473371 MSRB2Q9Y3D2 182 aa10.92□□□□□ -0.66
NHLRC3-204ENST00000473371 MINOS1-NBL1R4GNA1 71 aa10.92□□□□□ -0.66
NHLRC3-204ENST00000473371 BSNQ9UPA5 3926 aa10.92□□□□□ -0.66
NHLRC3-204ENST00000473371 CLPSL1A2RUU4 121 aa10.92□□□□□ -0.66
NHLRC3-204ENST00000473371 H3BMG7 143 aa10.92□□□□□ -0.66
NHLRC3-204ENST00000473371 H3BVH4 76 aa10.92□□□□□ -0.66
NHLRC3-204ENST00000473371 J3QR89 54 aa10.92□□□□□ -0.66
NHLRC3-204ENST00000473371 KLK15Q9H2R5 256 aa10.92□□□□□ -0.66
NHLRC3-204ENST00000473371 SPANXB1Q9NS25 103 aaPredicted RBP10.92□□□□□ -0.66
NHLRC3-204ENST00000473371 RIF1Q5UIP0 2472 aaKnown RBP10.92□□□□□ -0.66
NHLRC3-204ENST00000473371 H7C1H1 209 aa10.92□□□□□ -0.66
NHLRC3-204ENST00000473371 AZU1P20160 251 aa10.92□□□□□ -0.66
NHLRC3-204ENST00000473371 C8orf86Q6ZUL3 223 aa10.92□□□□□ -0.66
NHLRC3-204ENST00000473371 SIGMAR1Q99720 223 aa10.92□□□□□ -0.66
NHLRC3-204ENST00000473371 TSSC4Q9Y5U2 329 aaPredicted RBP10.92□□□□□ -0.66
NHLRC3-204ENST00000473371 ATP6V0E1O15342 81 aa10.91□□□□□ -0.66
NHLRC3-204ENST00000473371 AMTNQ6UX39 209 aa10.91□□□□□ -0.66
NHLRC3-204ENST00000473371 METTL26Q96S19 204 aa10.91□□□□□ -0.66
NHLRC3-204ENST00000473371 OR11H12B2RN74 326 aa10.91□□□□□ -0.66
NHLRC3-204ENST00000473371 F8VRH5 84 aa10.91□□□□□ -0.66
NHLRC3-204ENST00000473371 NBL1P41271 181 aa10.91□□□□□ -0.66
NHLRC3-204ENST00000473371 OR11H1Q8NG94 326 aa10.91□□□□□ -0.66
NHLRC3-204ENST00000473371 OR11H2Q8NH07 326 aa10.91□□□□□ -0.66
NHLRC3-204ENST00000473371 SMIM2Q9BVW6 85 aa10.91□□□□□ -0.66
NHLRC3-204ENST00000473371 SCGB3A1Q96QR1 104 aa10.9□□□□□ -0.66
NHLRC3-204ENST00000473371 CHTOPQ9Y3Y2 248 aaKnown RBP10.9□□□□□ -0.66
NHLRC3-204ENST00000473371 CSMD1Q96PZ7 3565 aa10.9□□□□□ -0.66
NHLRC3-204ENST00000473371 SH2D6Q7Z4S9 175 aa10.9□□□□□ -0.66
NHLRC3-204ENST00000473371 MRAP2Q96G30 205 aa10.9□□□□□ -0.66
NHLRC3-204ENST00000473371 CCDC140Q96MF4 163 aa10.9□□□□□ -0.66
NHLRC3-204ENST00000473371 LRBAP50851 2863 aa10.9□□□□□ -0.66
NHLRC3-204ENST00000473371 CACNA1BQ00975 2339 aa10.9□□□□□ -0.67
NHLRC3-204ENST00000473371 IGHV4-4A0A075B6R2 117 aa10.9□□□□□ -0.67
NHLRC3-204ENST00000473371 SMAGPQ0VAQ4 97 aa10.9□□□□□ -0.67
NHLRC3-204ENST00000473371 TCF15Q12870 199 aa10.9□□□□□ -0.67
NHLRC3-204ENST00000473371 RRN3P1Q2M238 152 aa10.9□□□□□ -0.67
NHLRC3-204ENST00000473371 ETDBQ3ZM63 59 aa10.9□□□□□ -0.67
NHLRC3-204ENST00000473371 CD300EQ496F6 205 aaPredicted RBP10.9□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms